GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:09:52

Sequence gi568815576f:17481035_17690233 : 209199 bp : 45.51% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16369  16552  184  1  1   37   91   302 0.957  25.19
 1.02 Intr +  18376  18515  140  0  2   93   91   143 0.994  14.36
 1.03 Intr +  22048  22097   50  1  2  102   50    26 0.989  -1.48
 1.04 Intr +  23813  23982  170  0  2  104   91   152 0.863  16.77
 1.05 Intr +  30779  30862   84  1  0   57  105    41 0.040   2.72
 1.06 Intr +  43084  43237  154  0  1   83   95   223 0.957  22.15
 1.07 Intr +  56000  56198  199  0  1   97   76    38 0.517   1.91
 1.08 Intr +  57486  57523   38  0  2   78   96     9 0.596  -1.39
 1.09 Intr +  57606  57697   92  1  2   82   70    77 0.798   5.01
 1.10 Intr +  57959  58085  127  1  1   62   91   134 0.989  11.35
 1.11 Intr +  59378  59682  305  0  2   60   64   226 0.886  13.71
 1.12 Intr +  60805  60933  129  0  0   58  115   101 0.994  10.69
 1.13 Intr +  61123  61969  847  0  1   92   86   236 0.577  14.75
 1.14 Intr +  67114  68530 1417  2  1  107   90   541 0.933  44.67
 1.15 Intr +  70997  71108  112  2  1   84  110    87 0.977  10.88
 1.16 Intr +  88890  88952   63  2  0   86  111    17 0.082   2.71
 1.17 Intr +  98711  98753   43  1  1   80   34    64 0.119  -1.99
 1.18 Intr +  98843  98930   88  0  1   42   83    94 0.674   3.33
 1.19 Intr + 100003 100125  123  1  0  106   51   194 0.999  17.20
 1.20 Intr + 100324 100379   56  1  2   98   64    86 0.684   5.82
 1.21 Intr + 101529 101629  101  1  2  118   75   233 0.962  24.83
 1.22 Intr + 102296 102500  205  1  1   21   68   181 0.830   8.17
 1.23 Intr + 106102 106267  166  2  1  121   99   -19 0.901   1.52
 1.24 Intr + 106891 107045  155  1  2  122   91   106 0.605  14.02
 1.25 Intr + 108556 108631   76  2  1   34   94   117 0.998   5.47
 1.26 Term + 109061 109202  142  2  1  150   42    50 0.922   4.00
 1.27 PlyA + 109831 109836    6                               1.05

 2.10 PlyA - 110513 110508    6                              -0.45
 2.09 Term - 111702 111640   63  0  0  105   46    89 0.982   4.29
 2.08 Intr - 113582 113495   88  1  1  126  109    46 0.992  10.47
 2.07 Intr - 117254 117160   95  2  2   94   75   111 0.990   9.16
 2.06 Intr - 119100 118993  108  0  0   91   98    47 0.607   6.48
 2.05 Intr - 120147 120058   90  0  0   97   80    58 0.983   6.09
 2.04 Intr - 131844 131778   67  2  1   73   79   -23 0.174  -5.79
 2.03 Intr - 132286 132177  110  1  2   95  101   109 0.758  11.98
 2.02 Intr - 138492 138427   66  0  0   83  100   103 0.873  10.10
 2.01 Init - 147601 147569   33  1  0   98   94    53 0.658   6.77
 2.00 Prom - 151045 151006   40                              -5.96

 3.03 PlyA - 151168 151163    6                               1.05
 3.02 Term - 157830 157587  244  2  1   84   49   167 0.755   7.77
 3.01 Init - 177853 177807   47  1  2   86   70    27 0.067  -1.14
 3.00 Prom - 178799 178760   40                              -4.56

 4.03 PlyA - 178811 178806    6                               1.05
 4.02 Term - 184486 184070  417  1  0   60   48   244 0.861  12.88
 4.01 Init - 187180 187178    3  1  0  113   81     0 0.614   1.80
 4.00 Prom - 190648 190609   40                              -6.16

 5.00 Prom + 197693 197732   40                              -4.36
 5.01 Init + 199621 199636   16  0  1   61  107    -1 0.671  -0.23
 5.02 Intr + 202180 202287  108  2  0  122   66    72 0.913   8.66
 5.03 Intr + 207952 208108  157  2  1   66   81    96 0.144   5.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  77499  77249  251  1  2   92   54   120 0.922   4.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:17481035_17690233|GENSCAN_predicted_peptide_1|1755_aa
XPQTFHSYLEDIINYRWELEEGKPNPLREASFQDLPLRTRVEILHRLCDYRLDADDVFDL
LKGLDADSLRVEPLGEDNSGALYWYFYGTRMYKEDPVQGKSNGELSLSSEKQEENSLASE
PQTRHGSQGPGQGTWWLLCQTEEEWRQVTESFRERTSLRERQLYKLLSEDFLPEICNMIA
QKGKRPQRTKAELHPRWMSDHLSIKPVKQEETPVLTRIEKQKRKEEEEERQILLAVQKKE
QEQMLKEERKRELEEKVKAVEVMKEHAMSVSGVCLAHSAFVFIVDRAKRRKLREERAWLL
AQGKELPPELSHLDPNSPMREEKKTKDLFELDDDFTAMYKVLDVVKAHKDSWPFLEPVDE
SYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYNGESSEYTKMSD
NLERCFHRAMMKHFPGEDGDTDEEFWIREDEKREKRRSRAGRSGGSHVWTRSRDPEGSSR
KQQPMENGGKSLPPTRRAPSSGDDQSSSSTQPPRERPAVPGTFGPLRGSDPATLYGSSGV
PEPHPGEPVQQRQPFTMQPPVGINSLRGPRLGTPEEKQMCGGLTHLSNMGPHPGSLQLGQ
ISGPSQDGSMYAPAQFQPGFIPPRHGGAPARPPDFPESSEIPPSHMYRSYKYLNRVHSAV
WNGNHGATNQGPLGPDEKPHLGPGPSHQPRTLGHVMDSRVMRPPVPPNQWTEQSGFLPHG
VPSSGYMRPPCKSAGHRLQPPPVPAPSSLFGAPAQALRGVQGGDSMMDSPEMIAMQQLSS
RVCPPGVPYHPHQPAHPRLPGPFPQVAHPMSVTVSAPKPALGNPGRAPENSEAQEPENDQ
AEPLPGLEEKPPGVGTSEGVYLTQLPHPTPPLQTDCTRQSSPQERETVGPELKSSSSESA
DNCKAMKGKNPWPSDSSYPGPAAQGCVRDLSTVADRGALSENGVIGEASPCGSEGKGLGS
SGSEKLLCPRGRTLQETMPCTGQNAATPPSTDPGLTGGTVSQFPPLYMPGLEYPNSAAHY
HISPGLQGVGPVMGGKSPASHPQHFPPRGFQSNHPHSGGFPRYRPPQGMRYSYHPPPQPS
YHHYQRTPYYACPQSFSDWQRPLHPQGSPSGPPASQPPPPRSLFSDKNAMASLQGCETLN
AALTSPTRMDAVAAKVPNDGQNPGPEEEKLDESMERPESPKEFLDLDNHNAATKRQSSLS
ASEYLYGTPPPLSSGMGFGSSAFPPHSVMLQTGPPYTPQRPASHFQPRAYSSPVAALPPH
HPGATQPNGLSQEGPIYRCQEEGLGHFQAVMMEQIGTRSGIRGPFQEMYRPSGMQMHPVQ
SQASFPKTPTAATSQEEVPPHKPPTLPLDQLSSDLNYILGSRKGRGSYRKQGRKPQPKEV
VTCREDSPNSGYPKEPAALCPGIPSPCRMTHQDLSITAKLINGGVAGLVGVTCVFPIDLA
KTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRL
LMEDGYGQGKSPSHKRAAAPGQACGLRLKEPDACSHRMQRNLKMEMLAGCGAGMCQVVVT
CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
VYFIGIGERILKCFD

>gi568815576f:17481035_17690233|GENSCAN_predicted_CDS_1|5268_bp
nngcctcagacattccacagctacctagaggacatcatcaactaccgctgggagctcgaa
gaagggaagcccaaccctctgagggaagccagtttccaggacctgcctcttcgcacacgg
gtggagatcctgcaccgactctgtgattaccggctggatgcagacgatgtcttcgatctt
ctaaagggcctggatgcagacagtctccgtgtggagccattgggtgaagacaattctggg
gcactatattggtatttctatggaacacgaatgtacaaagaggacccggtgcaaggaaaa
tccaatggagaactctctttgagcagtgaaaagcaggaagaaaattccttggcatccgag
ccacagacaagacatgggtcccaagggccaggccaaggtacttggtggctcctgtgccag
acagaagaggaatggagacaggtcaccgagagttttcgcgagaggacctcccttcgagaa
cggcagctctacaagctcctcagtgaggacttcctgcctgagatctgcaacatgatcgcc
cagaagggaaaacgtccacagcgcacaaaggcagagttgcatcctaggtggatgtctgac
cacctgtccatcaaacccgtcaagcaagaggagactcctgtgctgaccagaatagaaaaa
caaaagcgcaaagaggaggaagaagagcgtcagattcttctagcagtgcagaagaaggag
caggagcagatgctaaaggaagagaggaaacgcgagttggaggagaaggtcaaggcagtg
gaagtgatgaaggaacacgccatgtcagtgtctggagtgtgcttagctcactcagccttt
gtgttcattgtagatcgagcgaagaggagaaagctcagggaagaaagggcatggctgctg
gctcaaggaaaggagctccctccagaactttcccatctggaccccaattcccccatgaga
gaggaaaaaaagactaaagacctctttgagttggatgatgatttcactgctatgtataaa
gttctagacgtggtaaaggctcacaaggattcctggcccttcttggaacctgtggatgaa
tcttatgcccctaactattatcagattattaaggcccccatggatatttccagcatggag
aagaaactgaatggaggtttatactgtaccaaggaggaatttgtaaatgacatgaagacc
atgttcaggaattgtcgaaagtataatggggaaagtagtgagtataccaagatgtctgat
aatttagagaggtgtttccatcgggcaatgatgaaacattttcctggagaagatggagac
acagatgaagaattttggattcgagaggatgaaaagcgggagaaaagacggagtcgggct
gggcgaagtggtgggagccatgtttggacccgctccagggacccagaagggtccagcagg
aaacagcagcccatggagaatggaggaaagtcgttgccccccacacgccgagcgccctct
tctggggacgatcagagcagcagctccacacagcccccgcgggagaggccagcagtacca
ggaacatttggccctctgcgaggatcagatcctgccaccttgtatggctcctctggagtc
ccggagccacaccccggggagcctgtgcagcagcgtcagcctttcaccatgcagcctcca
gttggaattaacagcctccgaggacccaggctaggcacaccagaggagaagcaaatgtgc
ggggggctgacacacctttctaacatgggcccacaccctggatccttgcagcttgggcag
ataagtggcccaagtcaggatggaagcatgtatgctccagctcagttccagccaggattc
attcctccccggcatgggggggctccagcccggccaccagactttcctgaaagctcagaa
attcctcccagccatatgtatcgatcgtacaagtacctgaatcgagtacactctgccgtc
tggaatgggaaccatggtgctacgaaccaaggacccttgggcccagatgagaagccccac
ctggggccaggaccctctcaccagcctcgcactctcggtcacgtgatggattcccgagtc
atgagaccacctgtcccccccaaccagtggactgaacaatcaggcttcctacctcatgga
gttccttcctcagggtacatgcgaccgccctgcaagtctgccggacatcggttacagcca
cctccagtgccagcacccagttctttgtttggagcacctgcccaggctcttcggggggtg
cagggaggggactccatgatggacagcccagagatgattgcgatgcagcagctctcctcc
cgcgtctgccccccaggtgtgccttaccacccccaccagcctgcacacccccgtttacct
ggcccttttccgcaggtagctcacccaatgtcagtcactgtgtcagcccccaagcctgcc
ctgggcaaccctgggagggcaccggagaacagtgaagcacaagagcctgagaatgaccaa
gcagagccgttgcctggccttgaagagaaaccaccaggtgttggtacttcagagggggtc
tacctcacacaactacctcaccccacacctcccctgcagactgactgcaccaggcagagc
tcaccacaagaaagggaaacagtgggcccggagctcaaaagcagctcctccgaatctgcg
gacaactgtaaagcaatgaagggcaagaatccctggccctcggatagcagctaccccggc
ccagccgcccaagggtgcgtgagagacctctccacggtggcagacaggggcgctctatcc
gagaacggagtcattggggaagcatctccttgtggatcggaggggaagggccttggtagc
agtggttccgaaaagctgctctgccccagaggcagaacgttgcaggaaaccatgccatgc
acgggacagaacgcagcgacaccgcccagcacagaccccggtttgacgggaggcactgtg
agccagtttcccccgctgtatatgcctggcctagagtacccgaattcagctgcccattac
cacatcagtccaggcctgcagggtgtgggccctgtgatgggagggaagtccccagcatcc
catccccagcattttcccccaaggggctttcagtctaaccacccacattctggaggcttt
ccccggtatcgccccccacaaggaatgaggtattcctaccacccaccgccacagccttcc
taccaccactatcagcgaactccttactatgcctgtccacagagcttttctgactggcag
agacctctccatccccagggaagcccaagcggacccccagccagtcagcctcccccacca
aggtccctcttctcagataagaatgccatggccagtctgcaaggctgtgagacactgaat
gctgccttaacttctccaacccgtatggatgcagtggctgctaaagtcccaaatgacggg
cagaatcctggtccagaggaagagaagctggatgaatctatggagaggccagagagtccc
aaagaatttttagacctggacaaccataacgcagctaccaagcggcagagctcgttgtca
gccagcgagtatctctatggaactcctccgcctctgagttcaggaatgggatttggttca
tctgcatttccaccccacagtgtgatgctgcagacggggcctccctatacccctcagcgg
ccggccagtcactttcagcccagggcttactcttcccctgtggctgccctcccacctcac
cacccaggggccacccagcccaacggcctctctcaggagggtcccatctatcgctgccag
gaagaaggcctgggtcactttcaagctgtgatgatggaacaaattggcactagaagtgga
ataagaggacctttccaggaaatgtacagaccatcaggaatgcagatgcacccggtccag
tcgcaggcctcgttcccaaagacccccacagcagcaacatcacaggaggaggtgccgcct
cataagcctccaacacttcccctggatcagctcagcagcgatctgaactatatcctgggt
tccagaaaaggcagaggttcttaccgaaagcaggggaggaagccgcagcccaaggaggtc
gtcacttgccgggaagacagccccaacagcggctaccccaaggagccagcagccttgtgt
cctgggatccccagcccctgcagaatgacccaccaggatctgagcatcacagccaaactc
atcaatggaggtgtagcagggctcgtgggggtgacctgcgtgttccccatcgacttggcc
aagactcgcctgcagaaccagcatgggaaagccatgtacaaaggaatgatcgactgcctg
atgaagacggctcgggcggagggcttcttcggcatgtaccgaggggctgcagtgaacctc
actctggtcactccagagaaggccatcaagctggcggccaacgactttttccggcggctg
ctcatggaagatgggtatggccagggaaagtccccctctcacaagagggcagctgcacca
gggcaggcctgtggcctgcggctgaaggagcctgacgcctgttcccataggatgcagcgg
aacctgaagatggagatgcttgccgggtgtggggctgggatgtgccaggtcgtggtgacc
tgtcccatggaaatgctcaagattcagctgcaggatgctggacgcctggccgtccatcat
cagggctcggcctcagcaccctccacctccaggtcctacacaactggttcggcttccacc
cacaggcgcccctctgccaccctcattgcctgggagctgctccgcactcagggcctggct
gggctctacaggggcctgggtgccactctcctcagagacattcctttctccatcatctac
ttcccactgtttgccaaccttaacaacctggggttcaacgagctcgccggtaaggcgtcc
tttgcacattccttcgtgtcaggctgtgtggcaggttccatagctgcggtcgcagtgacg
cctctagatgttctgaaaactcgaatccaaaccctcaagaaaggcctgggcgaggacatg
tacagtgggatcaccgactgtgccaggaaactctggattcaggagggaccatctgccttc
atgaaaggcgctggctgccgggcactggtcatagcacctctctttgggattgctcaaggg
gtctattttattgggattggagagcgcatcttaaagtgttttgactag

>gi568815576f:17481035_17690233|GENSCAN_predicted_peptide_2|239_aa
MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK
EKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLV
LQFAFSTDCIYYFFQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQI
DQESYLPEDIAGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD

>gi568815576f:17481035_17690233|GENSCAN_predicted_CDS_2|720_bp
atggctctcagcgatgctgacgtgcaaaagcagataaagcatatgatggctttcattgaa
caagaagccaatgagaaagcagaagaaatagatgcaaaggcagaagaagagttcaacata
gagaaaggtcggcttgtgcaaacccaaagactaaagattatggaatattatgagaagaaa
gagaaacagattgagcagcagaagaaaattcagatgtccaatttgatgaatcaagcgaga
ctcaaagtcctcagagcaagagatgaccttatcacagacctactaaatgaagcaaaacag
agactcagcaaggtggtaaaagatacaaccaggtaccaagtgctgctggatggactggtt
ctccagtttgcattttctactgactgtatctactatttcttccagggtttgtaccagttg
ctggagccccgaatgattgttcgttgcaggaaacaagatttccctctggtaaaggctgca
gtgcagaaggcaattcctatgtacaaaattgccaccaaaaacgatgttgatgtccaaatt
gaccaggagtcctacctgcctgaagacatagctggtggagttgagatctataatggagat
cgtaaaataaaggtttccaacaccctggaaagccggctggatctcatagcccagcagatg
atgccagaagtccggggagccttgtttggtgcaaatgccaacaggaagtttttggactaa

>gi568815576f:17481035_17690233|GENSCAN_predicted_peptide_3|96_aa
MGFHHLGQAGLELLTLRDERGGGGSCFRQGPPAAVSAPTRGPNLPPPPCWRVRSPRRAFV
TAGVGAGPELPDIRNGIRSGRTDQRRPRRSLRPDVT

>gi568815576f:17481035_17690233|GENSCAN_predicted_CDS_3|291_bp
atggggtttcaccatcttggccaggctggtcttgaacttctgaccttaagagatgaaaga
ggcggcggcggcagttgcttccgacagggtcccccagcggcggtgagtgctccgacccgc
ggccctaatctaccgccgccgccatgttggagggtgaggtcaccccggcgtgccttcgtc
acggccggcgtcggggcgggacctgaactacctgacatccggaacggtatccggagcgga
aggaccgaccaacggaggccccggaggtctctccgtccagatgtgacctga

>gi568815576f:17481035_17690233|GENSCAN_predicted_peptide_4|139_aa
MKIGTGSGALLKHTRKCEATLEMGNKQAEVGTVWKAQETTGKMWESLELPRDLLNGFDQN
ADSDMGDKVQVEVVSDGDKELIGNWNKGDSCYVLAKRLVAFCPCPRDLWNFKPETDDLGY
LAEEISEQQSFKRKQSIKV

>gi568815576f:17481035_17690233|GENSCAN_predicted_CDS_4|420_bp
atgaaaattggtactgggagtggggcactgcttaaacatacccgaaaatgtgaagcaact
ttggaaatgggtaacaaacaggcagaagttggaacagtgtggaaggctcaggaaacaaca
ggaaaaatgtgggagagtctggaacttcctagagacttattgaatggttttgaccaaaat
gctgacagtgatatgggcgataaagtccaagttgaggtggtctcagatggagataaggaa
cttattgggaactggaacaaaggtgactcttgctatgttttagcaaagagactggtggcg
ttttgcccctgccctagagatctgtggaactttaaacctgagacagatgatttagggtat
ctggcagaagaaatctctgagcaacaaagcttcaagaggaagcaaagcataaaagtttga

>gi568815576f:17481035_17690233|GENSCAN_predicted_peptide_5|94_aa
MHDSRGVQLDIASQSLDQEILLKVKTEIEEELKSLDKEISEAFTSTGFDRHTSPVFSPAN
PESSMEDCLAHLGEKVSQELKEPLHKALQMLLSH

>gi568815576f:17481035_17690233|GENSCAN_predicted_CDS_5|282_bp
atgcatgattcacgaggggttcaactagatatagcttcacaatctctggatcaagaaatt
ttattaaaagttaaaactgaaattgaagaagagctaaaatctctggacaaagaaatttct
gaagccttcaccagcacaggctttgaccgtcacacttctccagtgttcagccctgccaat
ccagaaagctcaatggaagactgcttggcccatcttggagaaaaagtgtcccaggaactg
aaagagcctctccataaagcattgcaaatgctcctgagccan