GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:45:18

Sequence gi568815591r:123015521_123299946 : 284426 bp : 36.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5852   5998  147  1  0   74   68    78 0.194   3.91
 1.02 Term +  18993  19049   57  2  0   87   44    82 0.265   0.41
 1.03 PlyA +  21292  21297    6                               1.05

 2.02 PlyA -  21848  21843    6                               1.05
 2.01 Sngl -  35383  35228  156  1  0   54   43   194 0.786   5.65
 2.00 Prom -  40308  40269   40                              -3.05

 3.04 PlyA -  40869  40864    6                               1.05
 3.03 Term -  53862  53473  390  0  0   34   49   283 0.304  13.00
 3.02 Intr -  57175  57119   57  1  0  108  103   -16 0.168   0.06
 3.01 Init -  61060  60980   81  1  0   89  110     3 0.386   3.62
 3.00 Prom -  64934  64895   40                              -4.85

 4.02 PlyA -  65051  65046    6                               1.05
 4.01 Sngl -  65648  65184  465  2  0   42   43   268 0.920  13.59
 4.00 Prom -  65896  65857   40                             -11.74

 5.02 PlyA -  65997  65992    6                               1.05
 5.01 Sngl -  67626  66535 1092  0  0   41   45   466 0.659  34.36
 5.00 Prom -  67813  67774   40                             -11.84

 6.09 PlyA -  68051  68046    6                               1.05
 6.08 Term -  68702  68058  645  2  0  -44   49   438 0.006  19.83
 6.07 Intr -  69110  68949  162  2  0   64   71    82 0.005   3.35
 6.06 Intr -  78687  78632   56  1  2   64   98    38 0.025   0.18
 6.05 Intr -  90019  89979   41  0  2  127   75    32 0.130   2.75
 6.04 Intr - 113980 113863  118  2  1   48  116    74 0.813   4.80
 6.03 Intr - 116737 116605  133  1  1  118   80    39 0.841   5.40
 6.02 Intr - 118950 118890   61  2  1   96  108    23 0.554   2.92
 6.01 Init - 131781 131639  143  0  2   56  102   108 0.577   8.65
 6.00 Prom - 143644 143605   40                              -5.05

 7.08 PlyA - 145153 145148    6                               1.05
 7.07 Term - 146091 145987  105  0  0  113   43    74 0.300   2.83
 7.06 Intr - 152902 152854   49  0  1   87   83    30 0.277   0.16
 7.05 Intr - 153041 152984   58  0  1   93   86    19 0.306  -0.78
 7.04 Intr - 153815 153628  188  1  2   60   24   234 0.368  12.61
 7.03 Intr - 156384 156248  137  0  2   76  115    88 0.916   8.75
 7.02 Intr - 165581 165453  129  2  0   97  115    21 0.191   5.67
 7.01 Init - 184426 184328   99  1  0   58  113    90 0.919   8.82
 7.00 Prom - 195817 195778   40                              -4.05

 8.00 Prom + 202443 202482   40                              -6.15
 8.01 Init + 209796 209949  154  2  1   62   63    98 0.744   4.89
 8.02 Intr + 214981 215287  307  2  1   69   81   197 0.326  11.68
 8.03 Intr + 260659 260717   59  1  2   44  116    34 0.081  -0.59
 8.04 Term + 261998 262221  224  0  2   43   44   241 0.831  11.30
 8.05 PlyA + 262388 262393    6                               1.05

 9.03 PlyA - 266990 266985    6                               1.05
 9.02 Term - 276372 276307   66  0  0   73   39    98 0.757   0.36
 9.01 Init - 277617 277573   45  0  0   53   92    55 0.681   3.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 110155 110044  112  0  1  114   48    37 0.826  -0.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_1|67_aa
HFDYIGYCLPASKVSDKKSADNLIKDLLYVMRCFYFAAFKILFEFILLEHLSQHCDLGTY
GLPDPQA

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_1|204_bp
cactttgactatattggctactgccttcctgcctccaaagtttctgataagaaatctgct
gataatcttattaaggatctcttatatgtgatgaggtgcttctattttgctgcttttaag
attctctttgagttcatcttacttgagcacctcagccagcactgtgatctaggaacttac
ggacttcctgatccacaagcatga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_2|51_aa
MWESLELHRHLMNGFDQNADSDMDNKVQVDMVSDGDEELVDTGVNVTLVMF

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_2|156_bp
atgtgggaaagtttagaacttcatagacacttgatgaatggctttgatcaaaatgctgat
agcgatatggacaataaagtccaggttgacatggtctcagatggagatgaggaacttgtt
gacactggagtaaatgtgactcttgttatgttttag

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_3|175_aa
MQSISVKAKIPPKLNRQGRLYSRLLQQKHKLKQVQKKQNKTKKTKVDLEEKIKKISKSDK
GTLQLYHLSSEHTPAHDHQPQHLQIGKASELILTPSQHQPHPNSLCREKGHPDHPATMSF
FFNFEKLEGAKMANWMQPGGTSPTKGPGHQEDWHTEQTFGEKALKVDGGRMQTLD

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_3|528_bp
atgcagtccataagtgtcaaagcaaaaattccaccaaagttaaacagacaaggaagactt
tattcaaggctattgcaacagaaacacaaactaaaacaagttcaaaagaaacaaaacaaa
acaaaaaaaactaaagtggatttggaagaaaaaattaaaaaaatttccaagagtgataag
gggactctccaactgtaccacctgtcatctgagcatactccagcccatgaccatcagccc
cagcacctccagattggcaaagcatcagaactgatcctaacaccttcacagcaccaacct
cacccaaacagcctttgcagagaaaaaggccacccagaccatcctgctactatgagtttt
ttctttaattttgaaaagctggagggagccaagatggccaactggatgcagccaggagga
acatctcccaccaagggaccaggacatcaggaagactggcacactgagcagacctttgga
gagaaggcattgaaagtggatggagggaggatgcagacactggactga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_4|154_aa
MCKNHKHSSTPIADKQESQIMSELPFTIASKRIKRLGIQLTRDMKGLFKENYKPLLSEIK
QDTNKWNNIPCSWIGRINIVKMVILPKVIYRFNTIPIKLPMTFFTELEKTTLKFIWNQKR
ARIAKTILSQKNKAGGIMLPDFKLYYKATVTKTA

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_4|465_bp
atgtgcaaaaatcacaagcattcttctacaccaatagcagacaaacaagagagccaaatc
atgagtgaactcccattcacaattgcttcaaagagaataaaacgcctaggaatccaactt
acaagggatatgaagggcctcttcaaggagaactacaaaccattgctcagcgaaataaaa
caggacacaaacaaatggaataacattccatgctcatggataggaagaatcaatatcgtg
aaaatggtcatactgcccaaggtaatttatagattcaataccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagacaatcctaagccaaaagaacaaagctggaggcatcatgttacct
gacttcaaactatactacaaggctacagtcaccaaaacagcatga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_5|363_aa
MLVSDKTDFKPTKVKRDKEGHYIMVKESTQQEELTILNIYALNTGAPRFVKQVLRDLQRD
IDSHTIITGDFNTPLSTLDRSMRQKVNKDIQELNSALHQVDLIDIYRTLHPKSTEYTFFS
APHHTYSKTDHIVGSKALLSKCKRTEIITNCISDHSAIKLELRIKKLTQNRSTTWKLNNL
LLNDYWVHNEMKAEIKMFFETNESKDTTYQNLWDTFKAVRREKFIALNAHKRKQERSKID
TLISQLKELEKQEQTHSKASRRQEITKIRAELKEIETQNALQKINESRSWFFEKINKIDR
PLVRLIKKKREKNQIDAIKNDKGDITTDPTEIQTTIGEYYKHLYANKLENLEEMDKFLNT
YTL

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_5|1092_bp
atgctagtctctgataaaacagactttaaaccaacaaaggtcaaaagagacaaagaaggc
cattacataatggtaaaggaatcaacgcaacaagaagagctaactatcctaaatatatat
gcactcaatacaggagcacccagattcgtaaagcaagtccttagagacctacaaagagac
atagactcccacacgataataactggagactttaacaccccactgtcaacattagacaga
tcaatgagacagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagtg
gacctaatagacatctatagaactctccaccccaaatcaacagaatatacatttttctca
gcaccacatcacacttattccaaaactgaccacatagttggaagtaaagcactcctcagc
aaatgtaaaagaacagaaattataacaaactgtatctcagaccacagtgcaatcaaacta
gaactcaggattaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctg
ctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaa
accaatgagagcaaagacacaacataccagaatctctgggacacatttaaagcagtgcgt
agagagaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgac
accctaatatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagc
agaaggcaagaaataactaagatcagagcagaactgaaggagatagagacacaaaacgca
cttcaaaaaatcaatgaatccaggagctggttttttgaaaagatcaacaaaattgataga
ccactagtaagactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaat
gacaaaggggatatcaccactgatcccacagaaatacaaactaccattggagaatactat
aaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctcaacaca
tacaccctctga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_6|452_aa
MRTKYRTKKGHVTRKLTCLCIAYSSTIGGLTTITGTSTNLIFAEYFNTCPYHSTLILDLA
SVAFPRIQNCHGFISSEKMVLMIKKIILSRLWEQHVAVLLLKQMCKMSLISAGLIILCSF
KEMFKCGKTKTVQQKACAEVIKQEYQKLGPISVHPSAVDLTYEAPKTEQRTRDTEMEKQH
HCLQPPLLIPRQTGSGVDLQQTPTDLQLRVLTVRRKTNKQKGHHTKTSSVWHHHQRPKLT
RITSVEKFLNDLMELKTMARELRDECTSFSSRFDQLEERVSVMEDEMNEMKQEEKFREKR
VKRNEQSLQKIWDYVKRPNLRLIGVPESDGENGTKLENTLKDIIQENLPNLARQANIQIQ
EIQRTLQRYSSRRATPRRIIVRFTKVEMKEKILRAAREKGWVTHKGKPIRLTADLSAETL
QARREWGPIFNVLKEKEFSTQNFISSQTKLHK

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_6|1359_bp
atgagaaccaaatatcgaacaaagaagggccacgtgacacgtaaacttacgtgtttgtgc
attgcctactcttctaccattggtggactgacaacaatcactggtacctccaccaacttg
atctttgcagagtatttcaatacctgcccttatcattctactcttatcctggatctggct
tcagtggcttttcctaggattcaaaactgccatggttttattagtagtgagaagatggta
ctgatgattaaaaagataattctatccagattgtgggagcagcatgtggcagtcctcctg
ctgaagcaaatgtgtaaaatgtcactgatttcagcaggcttaattattctttgcagtttt
aaggagatgttcaaatgtggcaaaaccaaaacagtccaacaaaaagcttgtgctgaggtg
attaagcaagaataccaaaagcttgggccaataagtgttcatccaagtgctgtagacctt
acatatgaagctcctaaaactgagcaaagaacaagagatacagaaatggaaaaacagcat
cattgccttcagcctccgctgctgatacccaggcaaacggggtctggagtggacctccag
caaactccaacagacctgcagctgagggtcctgactgttagaaggaaaactaacaaacag
aaaggacatcacaccaaaacctcatctgtatggcaccatcatcaaagaccaaagctaact
agaataactagtgtagagaagttcttaaatgacctgatggagctgaaaacaatggcacga
gaactacgtgacgaatgcacaagcttcagtagccgatttgatcaactggaagaaagggta
tcagtgatggaagatgaaatgaatgaaatgaagcaggaagagaagtttagagaaaaaaga
gtgaaaagaaacgaacaaagcctccaaaaaatatgggactatgtgaaaagaccaaatcta
cgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctg
aaggatattatccaggagaacttacccaacctcgcaaggcaggccaacattcaaattcag
gaaatacagagaacgctacaaagatactcctcgagaagagcaactccaagacgcataatt
gtcagattcaccaaagttgaaatgaaggaaaaaatattaagggcagccagagagaaaggt
tgggttacccacaaagggaagcccatcagattaacagcggatctctcagcagaaactcta
caagccagaagagagtgggggccaatattcaacgttcttaaagaaaaagaattttcaacc
cagaatttcatatccagccaaactaagcttcataagtga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_7|254_aa
MKFFSYILVYRRFLFVVFTVLVLLPLPIVLHTKEAECAYTLFVVATFWLTEALPLSVTAL
LPSLMLPMFGIMPSKKVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALKMVMMVGVNP
AWLTLGFMSSTAFLSMWLSNTSTAAMVMPIAEAVVQQIINAEAEVEATQMTYFNGSTNHG
LEIDESVNGHEINERKEKTKPVPGYNNDTGKISSKVELEKHWKLAVQDGSPSPSVHSVSQ
LAAQGKEKVEGICT

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_7|765_bp
atgaaattcttcagttacattctggtttatcgccgatttctcttcgtggttttcactgtg
ttggttttactacctctgcccatcgtcctccacaccaaggaagcagaatgtgcctacaca
ctctttgtggtcgccacattttggctcacagaagcattgcctctgtcggtaacagctttg
ctacctagtttaatgttacccatgtttgggatcatgccttctaagaaggtggcatctgct
tatttcaaggattttcacttactgctaattggagttatctgtttagcaacatccatagaa
aaatggaatttgcacaagagaattgctctgaaaatggtgatgatggttggtgtaaatcct
gcatggctgacgctggggttcatgagcagcactgcctttttgtctatgtggctcagcaac
acctcgacggctgccatggtgatgcccattgcggaggctgtagtgcagcagatcatcaat
gcagaagcagaggtcgaggccactcagatgacttacttcaacggatcaaccaaccacgga
ctagaaattgatgaaagtgttaatggacatgaaataaatgagaggaaagagaaaacaaaa
ccagttccaggatacaataatgatacagggaaaatttcaagcaaggtggagttggaaaag
cactggaaacttgcagttcaagatggctccccatctccctctgtccattctgtatcgcag
ctagctgctcaaggaaaggagaaagtggaaggcatatgtacttag

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_8|247_aa
MLTTKEIIETTLLTEELFPGEHLEEGLCRQEVETSDPLRFCGILKKDLNRLGSSSWESGE
SPKTSNQEDIAMFIFNVMGIISTCGQIHLICELLIPAKSLPICARYLPIHEEKSLRLWPS
GQWTPWQAAEQTRIAAYPPTRWTVQVEGAWAKGHAMYHSYHMKVTEETIAAVKDCQSLDV
DVTGACCSVAALETAEIPLREGHVGNVHWLSYWMINVLLTALELISSVTLTASNVKVMKG
LDGLPLE

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_8|744_bp
atgcttacgacaaaagagatcattgaaacaaccttgttaactgaggagctgtttccagga
gagcatctggaagaaggactttgcaggcaagaagtagaaacgtcagatcccctgagattt
tgtggaatcttaaaaaaggacttgaatagactaggttcctcctcctgggaatctggtgaa
agcccaaaaacatcaaaccaagaagatatagccatgttcatatttaatgtcatgggcata
attagcacatgtgggcagatacatttgatatgtgaacttctgatacctgcaaagtctctg
cccatctgtgcccgatatcttcccatccatgaagaaaaatcactgcggctgtggccttct
gggcagtggaccccgtggcaggcagcagagcagacacgcattgctgcatatccacccact
aggtggactgtgcaagtggagggggcgtgggccaagggccatgctatgtatcatagttat
cacatgaaggtaactgaggagacaatagctgctgttaaagactgtcagtccctcgatgtg
gacgtaaccggcgcctgctgctctgtggctgctttggaaactgcagagatcccactgaga
gagggacatgttggaaatgtgcactggctttcatattggatgatcaatgttcttctcaca
gctctagagctgatcagctctgtgaccttgactgcttccaacgtcaaagtaatgaaggga
ttggatggtttgcctttagagtga

>gi568815591r:123015521_123299946|GENSCAN_predicted_peptide_9|36_aa
MNPDSAQAFRSTINIPIQHEDNGDEDLCDDPLSLSE

>gi568815591r:123015521_123299946|GENSCAN_predicted_CDS_9|111_bp
atgaatcctgattctgctcaagcttttagatcaactatcaatatacctattcaacatgaa
gacaatggggatgaagatctttgtgatgatccactttcacttagtgaatag