Result of FASTA (omim) for pF1KB6408
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6408, 335 aa
  1>>>pF1KB6408 335 - 335 aa - 335 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9693+/-0.000354; mu= 18.2885+/- 0.022
 mean_var=71.2460+/-14.649, 0's: 0 Z-trim(114.7): 118  B-trim: 421 in 1/54
 Lambda= 0.151948
 statistics sampled from 24616 (24743) to 24616 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.29), width:  16
 Scan time:  7.630

The best scores are:                                      opt bits E(85289)
NP_003028 (OMIM: 603492) signaling lymphocytic act ( 335) 2209 493.3  3e-139
XP_016857619 (OMIM: 603492) PREDICTED: signaling l ( 338) 2038 455.8 5.9e-128
NP_001317683 (OMIM: 603492) signaling lymphocytic  ( 357) 1759 394.7 1.6e-109
XP_005245513 (OMIM: 603492) PREDICTED: signaling l ( 305) 1556 350.1 3.5e-96
XP_011508207 (OMIM: 603492) PREDICTED: signaling l ( 196) 1298 293.4 2.7e-79
XP_016857620 (OMIM: 603492) PREDICTED: signaling l ( 218)  848 194.8 1.4e-49
XP_011507924 (OMIM: 180300,605554) PREDICTED: natu ( 329)  275 69.3 1.3e-11
NP_057466 (OMIM: 180300,605554) natural killer cel ( 365)  275 69.4 1.4e-11
XP_011507923 (OMIM: 180300,605554) PREDICTED: natu ( 334)  263 66.7 7.9e-11
NP_001160135 (OMIM: 180300,605554) natural killer  ( 370)  263 66.7 8.6e-11
XP_016857335 (OMIM: 606620) PREDICTED: SLAM family ( 279)  239 61.4 2.7e-09
NP_064510 (OMIM: 606620) SLAM family member 8 isof ( 285)  239 61.4 2.7e-09
XP_016857334 (OMIM: 606620) PREDICTED: SLAM family ( 293)  237 61.0 3.7e-09
XP_011508080 (OMIM: 606620) PREDICTED: SLAM family ( 300)  237 61.0 3.8e-09
XP_016857333 (OMIM: 606620) PREDICTED: SLAM family ( 300)  237 61.0 3.8e-09
XP_011508079 (OMIM: 606620) PREDICTED: SLAM family ( 300)  237 61.0 3.8e-09
XP_005245402 (OMIM: 606620) PREDICTED: SLAM family ( 335)  237 61.0 4.1e-09
XP_011508078 (OMIM: 606620) PREDICTED: SLAM family ( 337)  237 61.0 4.2e-09
XP_011508077 (OMIM: 606620) PREDICTED: SLAM family ( 343)  237 61.0 4.2e-09
XP_016858245 (OMIM: 608589) PREDICTED: SLAM family ( 319)  220 57.3 5.3e-08
NP_254273 (OMIM: 608589) SLAM family member 9 isof ( 289)  219 57.0 5.7e-08
NP_001317670 (OMIM: 606620) SLAM family member 8 i ( 176)  206 54.0 2.8e-07
NP_003865 (OMIM: 604513) SLAM family member 5 isof ( 328)  208 54.6 3.3e-07
XP_011508081 (OMIM: 606620) PREDICTED: SLAM family ( 234)  204 53.6 4.7e-07
NP_001171808 (OMIM: 604513) SLAM family member 5 i ( 345)  204 53.8 6.4e-07
NP_443163 (OMIM: 606446) SLAM family member 6 isof ( 331)  202 53.3 8.4e-07
NP_001171643 (OMIM: 606446) SLAM family member 6 i ( 332)  202 53.3 8.4e-07
XP_016855704 (OMIM: 606446) PREDICTED: SLAM family ( 335)  202 53.3 8.4e-07
NP_001269521 (OMIM: 606625) SLAM family member 7 i ( 296)  200 52.9   1e-06
NP_001171810 (OMIM: 604513) SLAM family member 5 i ( 272)  199 52.6 1.1e-06
NP_067004 (OMIM: 606625) SLAM family member 7 isof ( 335)  200 52.9 1.1e-06
NP_001317671 (OMIM: 604513) SLAM family member 5 i ( 339)  199 52.7 1.3e-06
XP_011508130 (OMIM: 606625) PREDICTED: SLAM family ( 348)  199 52.7 1.4e-06
XP_011508131 (OMIM: 606625) PREDICTED: SLAM family ( 309)  194 51.6 2.7e-06
XP_011507862 (OMIM: 600684) PREDICTED: T-lymphocyt ( 598)  195 52.0 3.8e-06
XP_016856792 (OMIM: 600684) PREDICTED: T-lymphocyt ( 607)  195 52.0 3.8e-06
XP_011507858 (OMIM: 600684) PREDICTED: T-lymphocyt ( 612)  195 52.0 3.9e-06
XP_016856791 (OMIM: 600684) PREDICTED: T-lymphocyt ( 621)  195 52.0 3.9e-06
XP_011507854 (OMIM: 600684) PREDICTED: T-lymphocyt ( 679)  195 52.0 4.2e-06
XP_016856788 (OMIM: 600684) PREDICTED: T-lymphocyt ( 688)  195 52.1 4.2e-06
XP_016856787 (OMIM: 600684) PREDICTED: T-lymphocyt ( 697)  195 52.1 4.3e-06
XP_011507852 (OMIM: 600684) PREDICTED: T-lymphocyt ( 701)  195 52.1 4.3e-06
XP_011507851 (OMIM: 600684) PREDICTED: T-lymphocyt ( 702)  195 52.1 4.3e-06
XP_011507850 (OMIM: 600684) PREDICTED: T-lymphocyt ( 703)  195 52.1 4.3e-06
XP_016856786 (OMIM: 600684) PREDICTED: T-lymphocyt ( 711)  195 52.1 4.3e-06
NP_001248386 (OMIM: 600684) T-lymphocyte surface a ( 565)  189 50.7   9e-06
NP_001248385 (OMIM: 600684) T-lymphocyte surface a ( 641)  189 50.7 9.9e-06
NP_002339 (OMIM: 600684) T-lymphocyte surface anti ( 655)  189 50.7   1e-05
XP_016856790 (OMIM: 600684) PREDICTED: T-lymphocyt ( 664)  189 50.7   1e-05
XP_016856789 (OMIM: 600684) PREDICTED: T-lymphocyt ( 678)  189 50.7   1e-05


>>NP_003028 (OMIM: 603492) signaling lymphocytic activat  (335 aa)
 initn: 2209 init1: 2209 opt: 2209  Z-score: 2620.8  bits: 493.3 E(85289): 3e-139
Smith-Waterman score: 2209; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KB6 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ
              250       260       270       280       290       300

              310       320       330     
pF1KB6 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::::::::::::::::::::::::::::::::::
NP_003 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES
              310       320       330     

>>XP_016857619 (OMIM: 603492) PREDICTED: signaling lymph  (338 aa)
 initn: 2042 init1: 1747 opt: 2038  Z-score: 2418.2  bits: 455.8 E(85289): 5.9e-128
Smith-Waterman score: 2038; 93.0% identity (95.0% similar) in 341 aa overlap (1-335:1-338)

               10        20        30        40        50        60
pF1KB6 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
              190       200       210       220       230       240

              250       260       270       280             290    
pF1KB6 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQK--PG----PLQKKL
       :::::::::::::::::::::::.  .   :: .  : .. .: :.  ::    ::::::
XP_016 YAGLLGGVIMILIMVVILQLRRRATLT---TTNQYWSQNVLTQDQERCPGCLPMPLQKKL
              250       260          270       280       290       

          300       310       320       330     
pF1KB6 DSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::::::::::::::::::::::::::::::::::::::::
XP_016 DSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       300       310       320       330        

>>NP_001317683 (OMIM: 603492) signaling lymphocytic acti  (357 aa)
 initn: 1747 init1: 1747 opt: 1759  Z-score: 2087.3  bits: 394.7 E(85289): 1.6e-109
Smith-Waterman score: 1759; 91.6% identity (94.6% similar) in 297 aa overlap (1-293:1-294)

               10        20        30        40        50        60
pF1KB6 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
              190       200       210       220       230       240

              250       260       270       280           290      
pF1KB6 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQK--PG--PLQKKLDS
       :::::::::::::::::::::::.  .   :: .  : .. .: :.  ::  :. :.   
NP_001 YAGLLGGVIMILIMVVILQLRRRATLT---TTNQYWSQNVLTQDQERCPGCLPMVKRTIT
              250       260          270       280       290       

        300       310       320       330                          
pF1KB6 FPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES                     
                                                                   
NP_001 RQQWKKKALRSMPKSRNQVLFRRNLTPSQLRTLAPPYMLLPQSLSQSLSRKQIPSQSMLV
       300       310       320       330       340       350       

>>XP_005245513 (OMIM: 603492) PREDICTED: signaling lymph  (305 aa)
 initn: 2004 init1: 1556 opt: 1556  Z-score: 1847.7  bits: 350.1 E(85289): 3.5e-96
Smith-Waterman score: 1948; 91.0% identity (91.0% similar) in 335 aa overlap (1-335:1-305)

               10        20        30        40        50        60
pF1KB6 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
XP_005 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPS-------
              190       200       210       220       230          

              250       260       270       280       290       300
pF1KB6 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ
                              :::::::::::::::::::::::::::::::::::::
XP_005 -----------------------GKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ
                                  240       250       260       270

              310       320       330     
pF1KB6 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::::::::::::::::::::::::::::::::::
XP_005 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES
              280       290       300     

>>XP_011508207 (OMIM: 603492) PREDICTED: signaling lymph  (196 aa)
 initn: 1298 init1: 1298 opt: 1298  Z-score: 1544.7  bits: 293.4 E(85289): 2.7e-79
Smith-Waterman score: 1298; 100.0% identity (100.0% similar) in 195 aa overlap (141-335:2-196)

              120       130       140       150       160       170
pF1KB6 RKEDEGWYLMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGD
                                     ::::::::::::::::::::::::::::::
XP_011                              MVSTPEIKVLNKTQENGTCTLILGCTVEKGD
                                            10        20        30 

              180       190       200       210       220       230
pF1KB6 HVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRT
              40        50        60        70        80        90 

              240       250       260       270       280       290
pF1KB6 DPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPL
             100       110       120       130       140       150 

              300       310       320       330     
pF1KB6 QKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
             160       170       180       190      

>>XP_016857620 (OMIM: 603492) PREDICTED: signaling lymph  (218 aa)
 initn: 836 init1: 836 opt: 848  Z-score: 1010.9  bits: 194.8 E(85289): 1.4e-49
Smith-Waterman score: 848; 84.1% identity (89.8% similar) in 157 aa overlap (141-293:2-155)

              120       130       140       150       160       170
pF1KB6 RKEDEGWYLMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGD
                                     ::::::::::::::::::::::::::::::
XP_016                              MVSTPEIKVLNKTQENGTCTLILGCTVEKGD
                                            10        20        30 

              180       190       200       210       220       230
pF1KB6 HVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRT
              40        50        60        70        80        90 

              240       250       260       270       280          
pF1KB6 DPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQK--PG
       :::::::::::::::::::::::::::::::::.  .   :: .  : .. .: :.  ::
XP_016 DPSETKPWAVYAGLLGGVIMILIMVVILQLRRRATLT---TTNQYWSQNVLTQDQERCPG
             100       110       120          130       140        

        290       300       310       320       330                
pF1KB6 --PLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES           
         :. :.                                                     
XP_016 CLPMVKRTITRQQWKKKALRSMPKSRNQVLFRRNLTPSQLRTLAPPYMLLPQSLSQSLSR
      150       160       170       180       190       200        

>>XP_011507924 (OMIM: 180300,605554) PREDICTED: natural   (329 aa)
 initn: 178 init1: 114 opt: 275  Z-score: 329.7  bits: 69.3 E(85289): 1.3e-11
Smith-Waterman score: 282; 24.1% identity (55.3% similar) in 320 aa overlap (35-330:1-315)

           10        20        30        40        50        60    
pF1KB6 GLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI-HIV
                                     .: :. . .:: :     .:. . :  :.:
XP_011                               MLGQVVTLILLLLLKVYQGKGCQGSADHVV
                                             10        20        30

            70           80                         90       100   
pF1KB6 VTMAKSLE---NSVENKIVS-----LDPSEAG------------PPRYLGDRYKFYLENL
          .  :.   ::...:. :     : ::. :            :    .::..: ..::
XP_011 SISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNL
               40        50        60        70        80        90

           110       120        130       140       150       160  
pF1KB6 TLGIRESRKEDEGWYLMTLEK-NVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLIL
       .: :. ....: : : . . . . .::   .:. ....:  :...  .:  . : : . :
XP_011 SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVAL
              100       110       120       130       140       150

            170       180       190       200       210       220  
pF1KB6 GCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTF
       .: : .  .:.:.: .  :.. .. :..   :.  .   .. . : :.::::.: .:.:.
XP_011 SCLVSRDGNVSYAWYR--GSKLIQTAGNLTYLDEEVDI-NGTHTYTCNVSNPVSWESHTL
              160         170       180        190       200       

            230       240       250       260       270       280  
pF1KB6 SPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYA
       .    :..  .: . :   . ..    ..:  .. . . :: . .. . :  :. :::: 
XP_011 NLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYE
       210       220       230       240       250       260       

              290       300       310       320       330          
pF1KB6 QVQ--KPGPLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES     
       .:.  :    ... ..::.       .. .   .: : ::  . :.:. .          
XP_011 DVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTS-QEP-AYTLYSLIQPSRKGDRFY
       270       280       290       300         310       320     

XP_011 SFSG
           

>>NP_057466 (OMIM: 180300,605554) natural killer cell re  (365 aa)
 initn: 178 init1: 114 opt: 275  Z-score: 329.0  bits: 69.4 E(85289): 1.4e-11
Smith-Waterman score: 282; 24.1% identity (55.3% similar) in 320 aa overlap (35-330:1-315)

           10        20        30        40        50        60    
pF1KB6 GLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI-HIV
                                     .: :. . .:: :     .:. . :  :.:
NP_057                               MLGQVVTLILLLLLKVYQGKGCQGSADHVV
                                             10        20        30

            70           80                         90       100   
pF1KB6 VTMAKSLE---NSVENKIVS-----LDPSEAG------------PPRYLGDRYKFYLENL
          .  :.   ::...:. :     : ::. :            :    .::..: ..::
NP_057 SISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNL
               40        50        60        70        80        90

           110       120        130       140       150       160  
pF1KB6 TLGIRESRKEDEGWYLMTLEK-NVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLIL
       .: :. ....: : : . . . . .::   .:. ....:  :...  .:  . : : . :
NP_057 SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVAL
              100       110       120       130       140       150

            170       180       190       200       210       220  
pF1KB6 GCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTF
       .: : .  .:.:.: .  :.. .. :..   :.  .   .. . : :.::::.: .:.:.
NP_057 SCLVSRDGNVSYAWYR--GSKLIQTAGNLTYLDEEVDI-NGTHTYTCNVSNPVSWESHTL
              160         170       180        190       200       

            230       240       250       260       270       280  
pF1KB6 SPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYA
       .    :..  .: . :   . ..    ..:  .. . . :: . .. . :  :. :::: 
NP_057 NLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYE
       210       220       230       240       250       260       

              290       300       310       320       330          
pF1KB6 QVQ--KPGPLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES     
       .:.  :    ... ..::.       .. .   .: : ::  . :.:. .          
NP_057 DVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTS-QEP-AYTLYSLIQPSRKSGSRK
       270       280       290       300         310       320     

NP_057 RNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELENFDVYS
         330       340       350       360     

>>XP_011507923 (OMIM: 180300,605554) PREDICTED: natural   (334 aa)
 initn: 178 init1: 114 opt: 263  Z-score: 315.4  bits: 66.7 E(85289): 7.9e-11
Smith-Waterman score: 270; 23.7% identity (54.2% similar) in 325 aa overlap (35-330:1-320)

           10        20        30        40        50        60    
pF1KB6 GLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI-HIV
                                     .: :. . .:: :     .:. . :  :.:
XP_011                               MLGQVVTLILLLLLKVYQGKGCQGSADHVV
                                             10        20        30

            70           80                         90       100   
pF1KB6 VTMAKSLE---NSVENKIVS-----LDPSEAG------------PPRYLGDRYKFYLENL
          .  :.   ::...:. :     : ::. :            :    .::..: ..::
XP_011 SISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNL
               40        50        60        70        80        90

           110       120             130       140       150       
pF1KB6 TLGIRESRKEDEGWYLMTLE------KNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGT
       .: :. ....: : : . .       .... : : ..  : ..:  :...  .:  . : 
XP_011 SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRGR
              100       110       120       130       140       150

       160       170       180       190       200       210       
pF1KB6 CTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISN
       : . :.: : .  .:.:.: .  :.. .. :..   :.  .   .. . : :.::::.: 
XP_011 CQVALSCLVSRDGNVSYAWYR--GSKLIQTAGNLTYLDEEVDI-NGTHTYTCNVSNPVSW
              160       170         180       190        200       

       220       230       240       250       260       270       
pF1KB6 NSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKS
       .:.:..    :..  .: . :   . ..    ..:  .. . . :: . .. . :  :. 
XP_011 ESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEF
       210       220       230       240       250       260       

       280         290       300       310       320       330     
pF1KB6 LTIYAQVQ--KPGPLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::: .:.  :    ... ..::.       .. .   .: : ::  . :.:. .     
XP_011 LTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTS-QEP-AYTLYSLIQPSRK
       270       280       290       300        310        320     

XP_011 GDRFYSFSG
         330    

>>NP_001160135 (OMIM: 180300,605554) natural killer cell  (370 aa)
 initn: 178 init1: 114 opt: 263  Z-score: 314.8  bits: 66.7 E(85289): 8.6e-11
Smith-Waterman score: 270; 23.7% identity (54.2% similar) in 325 aa overlap (35-330:1-320)

           10        20        30        40        50        60    
pF1KB6 GLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI-HIV
                                     .: :. . .:: :     .:. . :  :.:
NP_001                               MLGQVVTLILLLLLKVYQGKGCQGSADHVV
                                             10        20        30

            70           80                         90       100   
pF1KB6 VTMAKSLE---NSVENKIVS-----LDPSEAG------------PPRYLGDRYKFYLENL
          .  :.   ::...:. :     : ::. :            :    .::..: ..::
NP_001 SISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNL
               40        50        60        70        80        90

           110       120             130       140       150       
pF1KB6 TLGIRESRKEDEGWYLMTLE------KNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGT
       .: :. ....: : : . .       .... : : ..  : ..:  :...  .:  . : 
NP_001 SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRGR
              100       110       120       130       140       150

       160       170       180       190       200       210       
pF1KB6 CTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISN
       : . :.: : .  .:.:.: .  :.. .. :..   :.  .   .. . : :.::::.: 
NP_001 CQVALSCLVSRDGNVSYAWYR--GSKLIQTAGNLTYLDEEVDI-NGTHTYTCNVSNPVSW
              160       170         180       190        200       

       220       230       240       250       260       270       
pF1KB6 NSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKS
       .:.:..    :..  .: . :   . ..    ..:  .. . . :: . .. . :  :. 
NP_001 ESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEF
       210       220       230       240       250       260       

       280         290       300       310       320       330     
pF1KB6 LTIYAQVQ--KPGPLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPES
       :::: .:.  :    ... ..::.       .. .   .: : ::  . :.:. .     
NP_001 LTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTS-QEP-AYTLYSLIQPSRK
       270       280       290       300        310        320     

NP_001 SGSRKRNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELENFDVYS
         330       340       350       360       370




335 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:51:06 2016 done: Fri Nov  4 20:51:07 2016
 Total Scan time:  7.630 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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