GENSCAN 1.0 Date run: 4-Nov-116 Time: 23:27:42 Sequence gi568815575f:124246643_124471388 : 224746 bp : 38.82% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Sngl + 12994 13287 294 0 0 74 40 232 0.989 12.45 1.02 PlyA + 13420 13425 6 1.05 2.00 Prom + 17851 17890 40 -6.65 2.01 Init + 26550 26571 22 2 1 73 106 28 0.504 1.36 2.02 Term + 34326 34837 512 1 2 -25 42 459 0.890 23.55 2.03 PlyA + 35071 35076 6 1.05 3.00 Prom + 35522 35561 40 -4.65 3.01 Sngl + 86276 88420 2145 1 0 126 34 1673 0.904 159.60 3.02 PlyA + 88547 88552 6 1.05 4.17 PlyA - 88562 88557 6 1.05 4.16 Term - 100090 99911 180 1 0 77 41 195 0.201 10.33 4.15 Intr - 114834 114681 154 2 1 62 95 23 0.001 -0.45 4.14 Intr - 134652 133898 755 0 2 100 77 534 0.122 42.83 4.13 Intr - 136170 136028 143 1 2 78 96 78 0.987 6.75 4.12 Intr - 138212 136992 1221 0 0 86 68 1000 0.973 84.16 4.11 Intr - 139422 139035 388 0 1 97 72 337 0.966 26.44 4.10 Intr - 145706 145410 297 2 0 94 106 223 0.975 20.85 4.09 Intr - 158624 158389 236 0 2 136 86 265 0.986 27.58 4.08 Intr - 159088 159002 87 2 0 90 79 23 0.587 0.62 4.07 Intr - 159847 159675 173 0 2 51 116 176 0.982 15.36 4.06 Intr - 174179 173669 511 0 1 95 80 460 0.008 37.00 4.05 Intr - 175996 175630 367 1 1 116 80 377 0.904 33.49 4.04 Intr - 206849 206695 155 0 2 101 96 109 0.843 11.87 4.03 Intr - 210288 210146 143 2 2 63 33 107 0.089 1.78 4.02 Intr - 218194 218163 32 1 2 116 93 30 0.239 2.31 4.01 Init - 219065 219006 60 2 0 63 93 43 0.368 3.60 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Sngl - 2198 1908 291 2 0 51 31 232 0.961 9.20 S.002 Term + 124709 124749 41 0 2 95 49 70 0.921 0.17 S.003 Term - 134652 133894 759 0 0 100 42 509 0.863 39.94 S.004 Term - 174179 173665 515 0 2 95 38 486 0.987 37.82 S.005 Init - 209593 209512 82 1 1 63 75 76 0.808 4.98 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815575f:124246643_124471388|GENSCAN_predicted_peptide_1|97_aa MLRVVPVYYIHFESCSWPLEERVKCTFSGDLIVPESSEIQDVAFGFGFEGKEPRKSRGIP EVEFISFVSELSCQSQIGTAVCHDGLEAEGRAARLGS >gi568815575f:124246643_124471388|GENSCAN_predicted_CDS_1|294_bp atgctgcgtgtggtacctgtgtactacatacattttgagagttgctcctggccgttggag gagagagtgaagtgtacattttcaggggatttaatagtgcctgaaagttcagaaatccag gatgtggcatttggttttggatttgaaggcaaggaaccaaggaagagtagaggaattcct gaagtggaattcattagttttgtatcggaattgagctgccagtcacagattggcactgct gtgtgccatgatgggctggaggcagaaggaagagcagcaagacttggatcctaa >gi568815575f:124246643_124471388|GENSCAN_predicted_peptide_2|177_aa MPPLLSLGGSKFPRKKVKLAAGGEEEDDDNEDDDDDFDDQKTEEKAPVKKSVTRYSRMEK SQPEWKIQNTKKSNQNGKDSKPSTPRSKGQESFKKQKKSPRTPKGPSSVEDIKAKVQAST EKGGSLPKVEAKFINYVKNCFQMTDQEAIQDLWQWWKSLEENSLNNLFNIFCLISFL >gi568815575f:124246643_124471388|GENSCAN_predicted_CDS_2|534_bp atgcctcctctcctttcactgggtggtagcaagtttccacggaaaaaagtaaaacttgct gctggtggtgaagaagaagatgatgataatgaagatgatgatgatgattttgatgatcag aaaactgaagaaaaagcaccagtgaagaaatctgtaacgagatactccagaatggaaaag tctcaaccagaatggaaaatacaaaatacaaaaaagtcaaaccagaatggaaaagactca aaaccatcaacaccaagatcaaaaggacaagaatccttcaaaaaacagaaaaaatctcct agaacaccaaaaggacctagctctgtagaagacattaaagcaaaagtgcaagcaagtaca gaaaaaggtggttctcttcccaaggtggaagccaaattcatcaattatgtgaagaattgc ttccagatgactgaccaggaggctattcaagatctctggcagtggtggaagtctcttgaa gaaaatagtttaaacaatttattcaacattttctgtcttatttcatttctgtaa >gi568815575f:124246643_124471388|GENSCAN_predicted_peptide_3|714_aa MAMNFGDHASGFRHNDVIRFINNEVLMDGSGPAFYVAFRSRPWNEVEDSLQAIVADSQVP RAIKRACTWSALALSVRVATRQREELLHHVRRLQRHAEERQATSWALTSQLQQLRLEHEV AATQLHLAQAALQQALNERDGLYGRLLQIERFPQAAPLAHEIMSGPQAEQNGAAACPLAT EQQSDMVAMGTHANAQMPTPTDVLYVPGPLSPWAQGMQPPLPVPHPFPHPPPFPMKFPSL PPLPPAVVTGAEAAAVPLQMPPTEIHPPCPWPAVGFQEEMAPLWYQRSYIQEEDSKILQG SFPLGDSRSHSQGEGSERSQRMPLPGDSGCHNPLSESPQGTAPLGSSGCHSQEEGTEGPQ GMDPLGNRERQNQKEGPKRARRMHTLVFRRSHKSEGPEGPQGTVPQGDSRSYSQEGCSDR AQEMATLVFIRRCKPEGPKRPQWTVPLGDSRSHIKEEGPEGPQRIVLQGDNRSYSQEGSP ERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIVLQGDNRSYSQEG SPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIVLQGDNRSYSQ EGSRERAQGMATLVFSRSCKPEEGPERPQGTPLGDSRSHGVRESPKKWQPQRQKAKKPKV NKVSGSQQQEKPASFPVPVNWKCPWCKAINFSWRTACYKCKKACVPFESGGQTQ >gi568815575f:124246643_124471388|GENSCAN_predicted_CDS_3|2145_bp atggcgatgaattttggggaccatgccagcggcttccgccacaatgatgtgatcaggttc attaacaatgaagtcctcatggacggcagcggcccagccttttacgtggccttccgctcg cggccgtggaacgaggtagaggacagccttcaggccattgtggccgactctcaggtgccg cgcgccatcaagagggcctgtacctggagcgctttggctttgagcgtgcgagtggccacg aggcagcgggaggagctgctgcaccacgttcggcggctgcaaaggcatgcggaggagcgc caggcgacctcctgggctctaacgtcccagctgcagcagctgcgcctggagcatgaggtg gcggcaacacagctgcacctcgcgcaggctgccctgcagcaggcgctgaatgagcgtgat gggctgtacgggaggctgctccagatcgagaggtttccccaggccgctccactggcccat gaaataatgtctgggccgcaagcagagcagaatggggctgcggcatgtcccctggctaca gagcagcagagcgatatggtggccatggggacacatgctaatgcccagatgccaaccccg acagatgttctttatgtgccaggacctctgagtccctgggcccagggcatgcaaccccct ctgccagtgccacatccattcccacacccaccaccattcccaatgaaattcccatccttg ccacctctaccacctgctgtagtcacgggggcagaagcagcagcagtcccacttcagatg cctcctactgagatccacccaccttgcccgtggcctgcagtgggcttccaggaggagatg gcccctctgtggtaccagagaagctacatccaggaggaagattccaaaatccttcagggg tcattccccttaggagacagcagaagccacagccagggagaaggttcagagaggtcccaa agaatgcccctccccggggacagtgggtgccacaacccgctgtcagagagtccccagggg acagccccactggggagcagcggatgccactcccaggaagaaggtacagaaggaccccag gggatggatcccctggggaacagagagagacaaaatcagaaagaaggtccaaagagggcc cggaggatgcacaccctggtgtttcgcaggagccacaaatcagaaggtccagaggggccc caggggacggtcccccagggagacagcagaagctacagccaggaaggatgttcagatagg gcccaggagatggccaccctggtgtttatcaggaggtgcaaaccagaaggtccaaagagg ccccagtggactgtccccctgggggacagcagaagtcatatcaaggaagaaggcccagag gggccccagaggattgtcctccagggagacaacaggagctatagccaggaaggaagccca gagagggcccaggggatggccaccctggtgtttagcaggagctgcaaaccagaagaaggt ccagagaggccccaggacactcccctgggggacagcagaagtcatatcaaggaagaaggc ccagaggggccccagaggattgtcctccagggagacaacaggagctatagccaggaagga agcccagagagggcccaggggatggccaccctggtgtttagcaggagctgcaaaccagaa gaaggtccagagaggccccaggacactcccctgggggacagcagaagtcatatcaaggaa gaaggcccagaggggccccagaggattgtcctccagggagacaacagaagctatagccag gaaggaagccgagagagggcccaggggatggccaccctggtgtttagcaggagctgcaaa ccagaagaaggtccagagaggccccagggcactcccctgggggacagcaggagccatggt gtcagagaaagcccaaagaaatggcaacctcagaggcagaaggccaagaaaccaaaagtg aataaagtctcgggatcccagcagcaggagaagcctgcctcatttccagttccagtgaat tggaaatgcccatggtgtaaagccattaatttttcatggcgtacggcctgctataaatgc aagaaagcctgtgtgccatttgagagtggaggacaaactcagtga >gi568815575f:124246643_124471388|GENSCAN_predicted_peptide_4|1633_aa MRTGKKWRKRKESEKGWDTKIVTLVGQSVERDCTFDCLSANENAVSEHINEHDRWNKFCP QHWLPSFGDLGTAISKLESITVDRHGFIYFVDGTMIRKIDENAVITTVIGSNGLTSTQPL SCDSGMDITQVRLEWPTDLAVNPMDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGI DHFLVSKVAIHSTLESARAISVSHSGLLFIAETDERKVNRIQQVTTNGEIYIIAGAPTDC DCKIDPNCDCFSGDGGYAKDAKMKAPSSLAVSPDGTLYVADLGNVRIRTISRNQAHLNDM NIYEIASPADQELYQFTVNGTHLHTLNLITRDYVYNFTYNSEGDLGAITSSNGNSVHIRR DAGGMPLWLVVPGGQVYWLTISSNGVLKRVSAQGYNLALMTYPGNTGLLATKSNENGWTT VYEYDPEGHLTNATFPTGEVSSFHSDLEKLTKVELDTSNRENVLMSTNLTATSTIYILKQ GGDTRHSKSTLTFVSGILWSTATVMVGPGENTQSTYRVNPDGSLRVTFASGMEIGLSSEP HILAGAVNPTLGKCNISLPGEHNANLIEWRQRKEQNKGNVSAFERRLRAHNRNLLSIDFD HITRTGKIYDDHRKFTLRILYDQTGRPILWSPVSRYNEVNITYSPSGLVTFIQRGTWNEK MEYDQSGKIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQPDCLLSVTMPSMVRH SLQTMLSVGYYRNIYTPPDSSTSFIQDYSRDGRLLQTLHLGTGRRVLYKYTKQARLSEVL YDTTQVTLTYEESSGVIKTIHLMHDGFICTIRYRQTGPLIGRQIFRFSEEGLVNARFDYS YNNFRVTSMQAVINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHTKIF SANGQVIEVQYEILKAIAYWMTIQYDNVGRMVICDIRVGVDANITRYFYEYDADGQLQTV SVNDKTQWRYSYDLNGNINLLSHGKSARLTPLRYDLRDRITRLGEIQYKMDEDGFLRQRG NDIFEYNSNGLLQKAYNKASGWTVQYYYDGLGRRVASKSSLGQHLQFFYADLTNPIRVTH LYNHTSSEITSLYYDLQGHLIAMELSSGEEYYVACDNTGTPLAVFSSRGQVIKEILYTPY GDIYHDTYPDFQVIIGFHGGLYDFLTKLVHLGQRDYDVVAGRWTTPNHHIWKQLNLLPKP FNLYSFENNYPVGKIQDVAKYTTDIRSWLELFGFQLHNVLPGFPKPELENLELTYELLRL QTKTQEWDPGKTILGIQCELQKQLRNFISLDQLPMTPRYNDGRCLEGGKQPRFAAVPSVF GKGIKFAIKDGIVTADIIGVANEDSRRLAAILNNAHYLENLHFTIEGRDTHYFIKLGSLE EDLVLIGNTGGRRILENGVNVTVSQMTSVLNGRTRRFADIQLQHGALCFNIRYGTTVEEE KNHVLEIARQRAVAQAWTKEQRRLQEGEEGIRAWTEGEKQQLLSTGRVQGYDGYFVLSVE QYLELSDSANNIHFMRQSEIGRRYLLQQYSSSQYQNLYWSVQAAITRYHRQGGLNNRNLF LTILETGKSKIKVLQIAAIQPSGKQELLAGFPADFAMIHSHCVHGLVDSWAGRGGELCKG DAAATAARHKSTT >gi568815575f:124246643_124471388|GENSCAN_predicted_CDS_4|4902_bp atgagaacagggaagaagtggagaaaaaggaaggaatctgaaaaaggatgggacacaaag attgtcacacttgtaggtcagagtgtggaaagagactgtacctttgattgtttaagtgct aatgaaaatgctgtcagtgaacacatcaatgaacatgaccgttggaacaaattttgccca caacattggttaccaagttttggagatctgggcacagcaatatcaaaattggaaagcatc acagttgataggcatggatttatttactttgtggatgggactatgattcgcaaaattgat gagaatgctgtgatcacaactgtaatcggctcaaatggtctgacttccacacaaccactg agctgtgactcaggaatggacatcactcaggtgcgattagagtggccaacagaccttgca gtaaatcctatggacaattcattgtatgtcttggataacaacattgtgctgcaaatttct gagaacaggcgtgttcggatcatcgcaggacgccccattcactgccaggtgccaggcatc gatcatttcctggtcagcaaggtagcaattcactccactctagagtcagcgagggccatc agtgtctcccacagcgggctgctcttcatagctgaaacagacgagaggaaagtaaaccgc attcagcaagtaaccaccaatggggagatctacatcatcgctggtgcccccactgactgt gactgcaaaattgatccaaactgtgactgtttttcaggtgatggtggctatgccaaagat gcaaagatgaaagccccttcctccttagcagtgtcgcctgatggaaccctctatgtggca gacctcggaaatgttcgaattcgtaccatcagcaggaaccaagcccacctgaatgacatg aacatttatgagattgcttcacccgctgatcaggaactgtaccagttcactgtaaatgga acccacctacacaccctgaacttgataacaagggactatgtttataacttcacctacaat tctgaaggtgacttgggcgcgattaccagcagcaatggcaattcagtgcacattcgccgt gatgcaggcggaatgccgctatggcttgtggtgcctggcggacaagtatactggctgact ataagcagcaatggagtcctgaaaagagtgtcagcccaaggctataatctggccttaatg acctatccaggaaacacagggcttctggctaccaaaagtaacgaaaatggatggacaacc gtttatgagtatgaccccgagggacacctgaccaatgcaacgtttcccactggagaggtc agcagcttccacagtgacctggagaagctgacaaaagtggagctagatacttccaaccgt gaaaatgtcctcatgtcaaccaacttgacggcaactagtaccatatatattttaaaacaa ggtggtgacaccagacactctaagagtacactaacttttgttagtggtattttgtggagt acggcaactgtgatggtgggcccaggtgaaaatactcaaagtacctatcgggtgaatcca gatggttccctgcgtgtcacttttgccagcgggatggagatcggcctcagctcagagccc cacatcctggcaggggcagtcaaccctaccctgggcaaatgcaacatctcattgcccgga gagcacaatgcaaacctcatcgagtggcggcagaggaaggagcaaaacaaaggcaatgtt tcggcttttgaaaggaggctgagggcccacaacagaaacctactctccatagattttgat catataacccgcacaggaaagatctatgatgaccatcgaaaattcacccttcgaattctt tatgaccagactgggcgacccattctgtggtctcctgtaagcagatataatgaagtgaac atcacatattcaccttcgggattggtgacgtttattcaaagaggaacgtggaatgaaaaa atggaatatgaccagagtgggaaaattatttcaagaacttgggctgatgggaaaatttgg agctatacctacttagaaaaatctgtgatgcttctcctacacagccagcggcgttacatc tttgagtatgaccaaccagattgtctgctctcagtcaccatgcctagcatggtgcgtcac agcttacaaaccatgctttcagtgggctactaccggaacatctacaccccaccggacagt agcacttcttttatccaagactatagtcgagatggccgattgctacagaccctgcatctg gggacagggcgcagagtcttatacaagtacaccaagcaagcaaggctttctgaggttctc tatgataccactcaggtcacattaacatatgaagagtcttctggagtgattaagacaata cacctgatgcatgacggattcatctgcacaatcagatacaggcaaacaggacctcttatt ggacgccagattttcagattcagtgaagaaggccttgtgaatgcacggttcgactacagc tacaacaatttccgagtcacaagcatgcaagctgtaatcaatgaaacccctttgcctata gatctttaccgatatgttgatgtctctggcagaacagagcagtttggaaaattcagtgta attaattacgatttaaatcaggtcataactactacagtgatgaaacacaccaaaatcttc agtgccaatggacaagtcattgaagtccaatatgaaatcctaaaggcaattgcctactgg atgaccattcaatatgataatgtgggccgcatggtaatatgtgacataagggtaggagta gatgccaatataacaaggtacttctatgaatacgatgctgatgggcaacttcagactgtt tctgtaaatgacaaaacccagtggcgttatagttacgatctgaatggaaacatcaacctc ttaagccatgggaagagtgctcgtcttactcctctccgatatgacctccgagaccgcatc accagattaggagaaattcagtataaaatggatgaagatggctttctgaggcagagggga aatgatatttttgaatataattctaatggcctgctgcagaaagcctacaataaggcttct ggctggactgtgcagtattactatgatgggcttgggcgacgtgtcgcgagtaagtccagc ctagggcagcaccttcagttcttttatgcagaccttaccaaccccataagagttactcat ttgtacaaccacacaagctcggagattacatctctgtattatgatctccaaggtcacctt attgccatggagttaagcagtggtgaagaatattatgtagcctgtgataatacaggtacc ccactagctgtgttcagcagccgaggtcaggtcataaaggagatactatacacaccttat ggcgatatctatcatgacacttaccctgactttcaggtcattattggttttcatggagga ctctatgatttccttactaaattagtgcacctggggcaaagggattatgatgttgttgct ggcagatggacaacgcctaatcatcacatatggaaacagttgaacctccttcctaaacca ttcaacctctactcctttgaaaataactacccagttggcaaaattcaagatgttgcaaag tataccacagacatcagaagttggttggagctatttggtttccaattacacaatgtacta cctggatttcccaaacctgaattagaaaatttagaattaacttacgagcttctacggctt cagacaaaaactcaagagtgggatcctggaaagactatcctgggcattcagtgtgaactc cagaaacagctcaggaatttcatttccttggaccaactacctatgactccccgatacaat gatggacggtgccttgaaggagggaagcaaccaaggtttgctgctgtcccttctgttttt gggaaaggtataaaatttgccatcaaggatggcatagtaacagctgatattataggagta gccaatgaagatagcaggcggcttgctgccattctcaataatgcccattacctggaaaac ctacattttaccatagaggggagggacactcactacttcattaagcttgggtctctggag gaagacctggtgctcatcggtaacactggggggaggcggattctggagaatggtgtcaat gtcactgtgtcccagatgacttctgtgttgaatgggaggactagacggtttgcagatatt cagctccagcatggagccctgtgcttcaacatccggtatgggacaactgtcgaagaggaa aagaatcacgtgttggagattgccagacagcgcgcagtggcccaggcctggactaaggaa caaagaaggctgcaagagggggaagaggggattagggcatggacagaaggggaaaagcag cagcttttgagcactgggcgggtacaaggttacgatgggtattttgttttgtctgttgag cagtatttagaactttctgacagtgccaataatattcactttatgagacagagcgaaata ggcaggaggtatttgttacagcaatactcctcctctcagtaccaaaatctgtattggtct gttcaggctgccataacaagataccatagacagggtggcttaaacaacagaaatttattt ctcacaattctggagactgggaagtccaagatcaaggtgctgcaaatagctgccatccag cccagtggcaagcaggagcttctcgccggtttccctgctgattttgccatgatacacagc cactgcgtccatggcctggtggactcttgggcaggccgaggaggagaactgtgcaaggga gatgccgctgctactgcagccaggcacaagtcaaccacctga