GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:43:16

Sequence gi568815584f:69668157_69871458 : 203302 bp : 44.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1662   1657    6                               1.05
 1.04 Term -   1911   1714  198  0  0   61   44    78 0.786  -1.90
 1.03 Intr -   2635   2536  100  0  1  115   80    87 0.922  10.71
 1.02 Intr -   4880   4849   32  2  2  113  100     2 0.811   0.83
 1.01 Init -  10374  10315   60  0  0  102   33    52 0.782   2.35
 1.00 Prom -  13500  13461   40                              -2.46

 2.00 Prom +  16781  16820   40                              -2.56
 2.01 Init +  22317  22377   61  2  1   51   80    45 0.219   1.41
 2.02 Intr +  30797  30920  124  0  1   61   34    87 0.329   0.24
 2.03 Intr +  33243  33319   77  0  2   82   83    54 0.767   3.46
 2.04 Intr +  35239  35436  198  2  0  115   56   218 0.982  20.62
 2.05 Intr +  36448  36586  139  2  1   76  109   105 0.956  10.92
 2.06 Intr +  40521  40948  428  0  2   96  101   243 0.617  19.83
 2.07 Intr +  41468  41492   25  0  1   67  115    -6 0.035  -2.92
 2.08 Intr +  51050  51220  171  2  0   61  100    66 0.019   4.16
 2.09 Intr +  57102  57215  114  0  0   29   80    95 0.013   2.36
 2.10 Term +  90811  90955  145  1  1   47   54   127 0.185   2.58
 2.11 PlyA +  92815  92820    6                              -0.45

 3.00 Prom +  93616  93655   40                              -3.96
 3.01 Init + 100001 100126  126  1  0   78  103   109 0.767  11.56
 3.02 Intr + 100448 100518   71  1  2   44  100    70 0.756   1.78
 3.03 Intr + 100642 100740   99  1  0   74   92    34 0.560   1.63
 3.04 Intr + 102839 102949  111  2  0   83   70    41 0.520   1.29
 3.05 Term + 103041 103305  265  0  1   59   37   125 0.444  -0.52
 3.06 PlyA + 103830 103835    6                               1.05

 4.06 PlyA - 104097 104092    6                               1.05
 4.05 Term - 108232 108126  107  2  2  103   41    85 0.990   3.87
 4.04 Intr - 110373 110177  197  2  2   48   96   104 0.989   6.26
 4.03 Intr - 111204 111026  179  0  2  112   90   129 0.998  14.22
 4.02 Intr - 118151 117941  211  1  1  100  116   277 0.686  30.62
 4.01 Init - 128999 128644  356  2  2   74   96   517 0.991  47.71
 4.00 Prom - 131951 131912   40                              -5.06

 5.06 PlyA - 132486 132481    6                               1.05
 5.05 Term - 135087 134897  191  1  2   56   42   148 0.952   4.61
 5.04 Intr - 140759 140661   99  0  0   83   53    81 0.331   4.18
 5.03 Intr - 154842 154756   87  1  0   75   94    21 0.349   1.34
 5.02 Intr - 155758 155670   89  0  2   44  108    41 0.495   1.31
 5.01 Init - 156190 155952  239  1  2   81   36   199 0.712  11.49
 5.00 Prom - 161066 161027   40                              -5.76

 6.00 Prom + 162432 162471   40                              -4.56
 6.01 Init + 166066 166072    7  0  1   40   84     0 0.172  -4.25
 6.02 Intr + 174563 174709  147  0  0   43   58   213 0.559  14.01
 6.03 Intr + 177599 177744  146  0  2   89   45    41 0.090  -0.10
 6.04 Term + 184861 184926   66  0  0  104   42    51 0.122   0.04
 6.05 PlyA + 186825 186830    6                               1.05

 7.03 PlyA - 187227 187222    6                               1.05
 7.02 Term - 191663 191586   78  2  0   76   44    82 0.732   0.36
 7.01 Init - 193264 193142  123  1  0   85   65    67 0.717   4.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_1|129_aa
MPSRSIVFNSEQLESPIDPSGSRLCAREYKRLPATAGCTCHWQVPHFNNDDDNSNISSSP
QPYMQPYQNPGSLGFGARSIAFMYHDVQNKRFKFPKAAITRGHKKLANPFKSKSVKILRV
GILLLGKPV

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_1|390_bp
atgcccagccgcagcattgtttttaacagtgaacaactggagtcgcccatagatccatca
ggttcaagactctgtgcaagagagtacaaaagactccccgcaacagcgggctgtacctgc
cactggcaagtgccacattttaacaacgatgatgataacagcaacatttcatcttcacca
caaccctatatgcaaccctaccaaaacccagggtcattagggtttggagcaaggtctata
gcgttcatgtaccatgatgtacagaacaaaaggttcaagttccccaaagctgcaattacc
agaggtcataaaaagctggccaatcctttcaaatcaaagtcagtcaagattctaagagtt
ggaatcctgctcctaggaaaacctgtctga

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_2|493_aa
MWEGFKEKACKRSRGIFQEHELSTELPSANLELSENDPGAQIKTVSCLDCGFWKPLNNFF
AMSCHGVLSINYATEMNQLDTVQGEPGMCPLPPEPENGGYICHPRPCRDPLTAGSVIEYL
CAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLSIVASTASSVALIL
LLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPAD
PRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCEAWGSRASETVMVH
QATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDAEETKAHRRIPLSNVQNQ
DTKPFSKMQSQMLSSLSSQDGFWVPGKIRQGQETQAAPVSSLGLASERLPGLWKIVKAAL
ANPYIQSQKWELDQGFFPQQEPIQASDRLSDEQITPQKASDIRKYLLEFWKGSKKLQQKL
LEGTHSPPLAYVV

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_2|1482_bp
atgtgggaaggattcaaagagaaagcttgtaagaggagcagagggatcttccaggagcac
gagttaagtacagagcttccttctgcgaacctggaattgtcagagaatgatcctggtgca
cagatcaagacagtttcttgcctagactgtggcttctggaagccactgaacaatttcttt
gccatgagctgccatggggtgctcagcattaattatgccacggaaatgaaccaattagac
acagtccaaggagagccagggatgtgccccctaccaccggagccagagaatggtggctac
atctgccacccccggccctgcagagaccccctgacagcaggcagtgtcatcgaatacctg
tgtgctgaaggctacatgttgaagggcgattacaaatacctgacgtgtaagaatggcgag
tggaaaccagccatggagattagctgccgtctcaacgaggataaagacacccacacatca
cttggggtccccacgctgtctatagtggcttctactgccagctccgtggcgctcattctc
ctcctcgtggtgctgtttgtgctgctgcagccaaagctgaagtctttccatcatagcagg
cgtgaccagggggtatctggggaccaggtctccatcatggtggatggagtccaggttgca
ctaccatcatacgaggaggctgtatatggcagttctggtcactgtgtgccacctgctgac
cccagagtacagattgtgctgtcagaagggtctgggcccagtgggaggagcgtgccaagg
gagcaacagctgccggaccaaggggcctgctcctctgcaggtggagaagatgaggcccca
ggccagtctggactatgtgaagcctggggctctcgggcctcagagactgtgatggtgcat
caggcaaccacctcttcctgggtggccggctcagggaaccgccaactggcacacaaagaa
actgcagattcagagaacagtgacatacaaagccttttatccctcacgtcagaggagtac
acagatgctgaggaaactaaggctcacagaagaatccctctcagcaatgtccaaaaccag
gacaccaagccatttagcaaaatgcagtcccagatgctcagcagtctcagcagtcaggat
gggttctgggtccctggaaagatcaggcaaggccaggagacccaggcagcccctgtctcc
tccctgggccttgcttctgaaaggctgcccggtctatggaagattgtaaaggcagcccta
gcaaacccatacattcagtctcagaagtgggagctggaccagggcttcttcccacaacaa
gaacccatccaggccagtgatagactcagcgatgagcagataaccccacagaaagccagt
gacatcaggaagtatttgctggagttctggaaaggatctaagaagcttcaacagaagctc
ctggaagggacgcactctcctcctctggcctacgtggtgtga

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_3|223_aa
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRVVEFASYGDLKNAIEKLSGKE
INGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRS
VSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_3|672_bp
atgagtggctgtcgggtattcatcgggagactaaatccagcggccagggagaaggacgtg
gaaagattcttcaagggatatggacggataagagatattgatctgaaaagaggctttggt
tttgtggaatttgaggatccaagggatgcagatgatgctgtgtatgagcttgatggaaaa
gaactctgtagtgaaagggttactattgaacatgctagggctcggtcacgaggtggaaga
ggtagaggacgatactctgaccgttttagtagtcgcagacctcgaaatgatagacgggtg
gttgagtttgcctcttatggtgacttaaagaatgctattgaaaaactttctggaaaggaa
ataaatgggagaaaaataaaattaattgaaggcagcaaaaggcacaggtcaagaagcagg
tctcgatcccggaccagaagttcctctaggtctcgtagccgatcccgttcccgtagtcgc
aaatcttacagccggtcaagaagcaggagcaggagccggagccggagcaagtcccgttct
gttagtaggtctcccgtgcctgagaagagccagaaacgtggttcttcaagtagatctaag
tctccagcatctgtggatcgccagaggtcccggtcccgatcaaggtccagatcagttgac
agtggcaattaa

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_4|349_aa
MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKG
LAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSI
VMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKR
PQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVL
SALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLL
IAIFWCYEKFKTPKDKTKMIYTAATTEETIPGALGNGTYKGEDCSPCTA

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_4|1050_bp
atggaggcccacaacgcgtctgccccattcaacttcaccctgccacccaactttggcaag
cgccccacagacctggcactgagcgtcatcctggtgttcatgttgttcttcatcatgctc
tcgctgggctgcaccatggagttcagcaagatcaaggctcacttatggaagcctaaaggg
ctggccatcgccctggtggcacagtatggcatcatgcccctcacggcctttgtgctgggc
aaggtcttccggctgaagaacattgaggcactggccatcttggtctgtggctgctcacct
ggagggaacctgtccaatgtcttcagtctggccatgaagggggacatgaacctcagcatt
gtgatgaccacctgctccaccttctgtgcccttggcatgatgcctctcctcctgtacatc
tactccagggggatctatgatggggacctgaaggacaaggtgccctataaaggcatcgtg
atatcactggtcctggttctcattccttgcaccatagggatcgtcctcaaatccaaacgg
ccacaatacatgcgctatgtcatcaagggagggatgatcatcattctcttgtgcagtgtg
gccgtcacagttctctctgccatcaatgtggggaagagcatcatgtttgccatgacacca
ctcttgattgccacctcctccctgatgccttttattggctttctgctgggttatgttctc
tctgctctcttctgcctcaatggacggtgcagacgcactgtcagcatggagactggatgc
caaaatgtccaactctgttccaccatcctcaatgtggcctttccacctgaagtcattgga
ccacttttcttctttcccctcctctacatgattttccagcttggagaagggcttctcctc
attgccatattttggtgctatgagaaattcaagactcccaaggataaaacaaaaatgatc
tacacagctgccacaactgaagaaacaattccaggagctctgggaaatggcacctacaaa
ggggaggactgctccccttgcacagcctag

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_5|234_aa
MPSGTIWILEARHSHSGVLLWPIYRVTRKAASFEREPEQDKALQQAQSAVQAALPLGLYD
PADPMVLEVSVADNDAGPHRHKVGRAQQHPIIQWKSYILDQAQTGPEGTKRAEICPHQVA
GLIDLDYQDEISLLIHNRAMQHQIQKFTNVLDGTERVQKYSLSDIAASAIGSHKMPCSFD
LSLVEQLLWGHQLPDKKSDYSEITMQMTYPQQPYEDPKQKPSAEPVISQNCERE

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_5|705_bp
atgcctagtgggactatttggattttggaagcaagacattctcattcgggtgtgttactc
tggcccatttatcgagtgacccgaaaggctgccagttttgagcgagaaccagaacaggac
aaggcgctgcaacaggcccagtctgctgtgcaagctgctctgccacttgggctatatgac
ccagcagatccaatggtgcttgaggtgtcagtggcagataatgatgctggcccccataga
cataaagtgggtcgtgcacagcagcatcccatcatccaatggaagtcgtatatacttgat
caggctcaaacaggtcctgaaggcacaaaaagggcagaaatttgtcctcaccaggtggct
gggctgattgacctggactatcaagatgaaattagtctactaatccataacagagctatg
cagcaccaaattcagaaatttacaaatgtgcttgatggcacagagagagttcagaagtac
tcactgagtgatattgctgcttcagccataggaagtcataagatgccttgcagctttgac
ttaagcctcgtggagcaattgctctggggccatcagctaccagataagaagtctgactac
tctgagatcacgatgcagatgacttatcctcagcaaccatatgaggaccccaagcaaaag
ccatcagctgaacctgtcatatcccagaactgtgaaagagaataa

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_6|121_aa
MQAAKRPSDEWEGKAEGGEEKEKEEEEEEEEEEEEVEEVAVAVQARQSGMECDSPQFFGA
SIAPSQSGPNLELKQVAGGSQSGLLIPLAPVIEYVAQPEAAGTPANCLEGAMTTRHMDTT
S

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_6|366_bp
atgcaagctgcaaagaggcccagtgatgaatgggaggggaaagcggaaggtggggaggag
aaggagaaggaggaggaggaggaggaggaggaggaggaggaggaggtggaggaggtggca
gtggcggtacaagcaaggcagagtgggatggagtgtgacagcccccaattttttggtgca
tccattgctccctcacaatcaggccccaacttagagctgaagcaggtggcaggtggaagc
cagtcagggcttctcattcctctggctccagtaattgagtatgtggctcagccagaagca
gcaggaacacctgcaaactgcctggaaggggccatgaccaccagacacatggataccaca
agttga

>gi568815584f:69668157_69871458|GENSCAN_predicted_peptide_7|66_aa
MEYRAPGRPKSRKHPGRKEEGLTEMKRDQDLHEKGPEHTCRNVRLDTQQLAQNQASAQGA
LNTVDE

>gi568815584f:69668157_69871458|GENSCAN_predicted_CDS_7|201_bp
atggagtacagggccccagggagacctaagtccagaaagcacccaggaagaaaagaggag
ggcctaacggagatgaagagggaccaagatctgcatgaaaaagggccggagcacacctgc
cggaacgtcagactggatacccagcagctggcacagaaccaggcgtcggctcagggagcc
ctgaatactgtcgatgaatga