GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:08:45

Sequence gi568815592r:143995240_144195497 : 200258 bp : 40.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  12551  13019  469  2  1    7   54   336 0.528  15.56
 1.02 PlyA +  13744  13749    6                               1.05

 2.04 PlyA -  14015  14010    6                               1.05
 2.03 Term -  22704  22520  185  1  2   22   45   137 0.069  -0.48
 2.02 Intr -  45832  45705  128  0  2   84   86     6 0.154  -0.60
 2.01 Init -  47013  46889  125  0  2   48   91   120 0.245   7.99
 2.00 Prom -  47303  47264   40                              -3.25

 3.03 PlyA -  47606  47601    6                               1.05
 3.02 Term -  48891  48373  519  0  0  -10   45   219 0.017   1.11
 3.01 Init -  51072  50683  390  0  0   88   44   290 0.177  21.42
 3.00 Prom -  52366  52327   40                              -7.65

 4.03 PlyA -  52873  52868    6                               1.05
 4.02 Term -  53185  52881  305  2  2    8   53   218 0.325   4.65
 4.01 Init -  54101  53891  211  2  1   58   37   144 0.483   5.30
 4.00 Prom -  59162  59123   40                              -5.15

 5.00 Prom +  61992  62031   40                              -4.85
 5.01 Init +  62893  62919   27  0  0   79   81    43 0.239   1.40
 5.02 Intr +  63939  64037   99  2  0   83   54   101 0.428   5.59
 5.03 Intr +  68938  69099  162  0  0   86   18   128 0.184   4.85
 5.04 Intr +  81301  81403  103  0  1  104   78    10 0.052   0.43
 5.05 Intr +  96632  96675   44  0  2   54   91    57 0.000  -0.36
 5.06 Intr +  99809  99984  176  1  2   33   79   161 0.005   7.52
 5.07 Intr + 100036 100298  263  1  2   14   92   381 0.846  27.31
 5.08 Term + 100977 101191  215  1  2  -18   49   229 0.691   4.81
 5.09 PlyA + 102423 102428    6                               1.05

 6.05 PlyA - 102573 102568    6                               1.05
 6.04 Term - 121663 121471  193  0  1   76   48   165 0.559   7.21
 6.03 Intr - 122260 121990  271  2  1   55   21   193 0.471   4.98
 6.02 Intr - 123743 122898  846  0  0    2   37   350 0.675  11.71
 6.01 Init - 130627 130549   79  1  1   50   82    64 0.283   3.27
 6.00 Prom - 130775 130736   40                              -5.85

 7.00 Prom + 132616 132655   40                              -6.05
 7.01 Sngl + 134438 134770  333  1  0   83   37   279 0.565  18.07
 7.02 PlyA + 134859 134864    6                               1.05

 8.00 Prom + 136186 136225   40                              -7.05
 8.01 Init + 145498 145570   73  0  1   83   78   116 0.991  11.38
 8.02 Intr + 149620 149703   84  2  0  112   75    64 0.782   6.37
 8.03 Intr + 154827 155174  348  1  0   47   39   236 0.034   9.00
 8.04 Term + 162951 163024   74  1  2   37   40   125 0.164  -0.31
 8.05 PlyA + 164077 164082    6                               1.05

 9.03 PlyA - 165187 165182    6                               1.05
 9.02 Term - 173310 173121  190  2  1   22   45   216 0.623   6.64
 9.01 Init - 174161 173917  245  2  2   52  -49   278 0.573   7.75
 9.00 Prom - 175557 175518   40                              -5.35

10.00 Prom + 184504 184543   40                              -3.15
10.01 Sngl + 191389 192252  864  0  0   74   43  1455 0.973 135.22
10.02 PlyA + 192589 192594    6                               1.05

11.00 Prom + 194772 194811   40                              -6.25
11.01 Init + 199277 199341   65  1  2   85  113     8 0.572   3.68
11.02 Term + 199880 200072  193  2  1   30   48   233 0.578   9.41
11.03 PlyA + 200209 200214    6                              -3.74


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 183837 184079  243  2  0   75   31   174 0.801   8.18
S.002 Term + 184293 184517  225  2  0   81   46   101 0.832   1.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_1|156_aa
XLERQVVRIGSVDLIPDRRERLWQRRPGGPAALAVGLPGLRVTICGVPHPAPRSPDPHVG
GAAKAHPPRGREPSAVLAARQCTATAAPSPPAAAASTQTPTLRGDDPRSSGEAARACHLR
GHDGDPGKRPARQGPALLSCEHGCPVRPSVQHPPGE

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_1|471_bp
nngttagagcgccaggttgtaagaatcgggtctgtggacctcataccagataggcgcgaa
cgcctctggcagcggcgtccagggggtccggcggcactcgcggtggggctgcctgggttg
cgggtgacgatctgcggggtcccgcacccggccccgcggagcccggacccgcacgtaggc
ggcgcggcaaaggcacaccctcctcgcggccgcgaacccagcgccgtcctcgcagcgcgg
caatgcacggccaccgctgcccccagcccgcccgccgcagccgcgagcacccaaacacct
accctgcggggcgacgacccccggagctcaggcgaggccgctcgggcgtgccacctccgc
ggccatgacggcgacccggggaagcgccccgcgcgccaaggccccgcgctgctgagctgt
gagcacggctgccccgtccgtccgtccgtccagcacccgcccggagagtga

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_2|145_aa
MGKDFMTKTPKAMATKAKIDKWDLIKRKRFCTAKETTIRVNSSYVCKTFPVLEKNKAELS
LDHRSLSNYYILSFSHLRVLKIIQGWLGKEWKQGGNPVKETGESYCSQSKHPVSERVRNQ
EEQEVMIRGGNFGVEDFQGRADPGC

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_2|438_bp
atgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaatagac
aaatgggatctaattaaacgaaagaggttctgcacagcaaaagaaactaccatcagagtg
aacagctcatatgtctgcaaaacatttcctgttctggaaaagaataaagccgaactgtct
cttgaccacagatccctttctaactactatattctctctttttcccacctaagggtttta
aagattattcaaggctggctagggaaggagtggaaacaaggagggaatccagtgaaggag
actggagagtcttactgcagtcagagtaaacatcctgtgagtgagagagtgagaaaccag
gaagagcaggaagttatgatcagaggtgggaattttggagttgaagatttccaggggaga
gcagatcctggttgttga

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_3|302_aa
MGRNQSRKAENSKNQSTFSPPKDHSSLPATEQSWTENDFEELTEVGFRRLAISNFSELKE
DVQTHCKEARNLEKRLDEWLTRTNSVEKNLNDLMELKTMAQELCDACTSFSSQFNQVEER
VSVIEDQMNEDLVFEKIDKIDRPLARLIKKKREKNQIDTIKNDKGDITNDPTEIQTSIRE
YYNHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGPEIEAIINSLPTKKSPGP
DGFTAKFYQSYKEELVPFLLKQFQSIEKEGILPNSFYEASIILIPKPSRDTTKKKRILDQ
YP

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_3|909_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaaccagagcaccttttctcct
ccaaaggatcacagctccttgccagcaacagaacaaagctggacagagaatgactttgag
gagttgacagaagtaggcttcagaagattggcaatatcaaacttctctgagctgaaggag
gatgttcaaacccattgcaaggaagccagaaaccttgaaaaaagattagatgaatggctc
actagaacaaacagtgtagagaagaacttaaatgacctgatggagctgaaaaccatggca
caagaactatgtgacgcatgcacaagcttcagtagccaattcaatcaagtggaagaaagg
gtatcagtgattgaagatcaaatgaatgaagacctggtttttgaaaagatcgacaaaatt
gatagaccactagcaaggctaataaagaagaaaagagagaagaatcaaatagacacaata
aaaaatgataaaggggatatcaccaatgatcccacggaaatacaaacttctatcagagaa
tactataaccacctctatgcaaataaactagaaaacctagaagaaatggataaattcctg
gacacatacaccctgccaaggctaaaccaggaagaagttgaatccctgaatagaccaata
acaggccctgaaattgaggcaataattaacagcctaccaaccaaaaaaagtccaggacca
gacggattcacagccaaattctaccagagttacaaagaggagctggtaccattccttctg
aaacaattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagc
atcatcctgataccaaagcctagcagagacacaacaaaaaaaaagagaattttagaccaa
tatccctga

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_4|171_aa
MRKQLWNWVTGRGWNRLEGPEEDRKLWESLELSRDLLNGFDQNAVNDVDNEVQAEVVSDE
DKESLGNWSKGVELSWRTSASVVQEENVGLEPPHRVPTGALPNGAVRRGPLSSRSQNARS
TDSLHCAPGKATNTQCQPMKAAKREAVPCKATEAELPKTVGAHFLHQHTLM

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_4|516_bp
atgaggaagcaactttggaactgggtaacaggcagaggttggaacagattggagggccca
gaagaggacaggaagttgtgggaaagtttggaactttctagagacttgttgaatggtttt
gaccaaaatgcagttaatgatgtggacaatgaagtacaggctgaggtggtctcagatgaa
gataaggaaagtcttgggaactggagcaaaggggtggagctctcatggagaacctctgct
agcgtagtccaggaggaaaatgtggggttggagcccccacacagagtccccactggggca
ctgcctaatggagctgtgagaagagggccactgtcctccagatcccagaatgctagatcc
actgacagcttgcactgtgcacctggaaaagccaccaacactcaatgccagcccatgaaa
gcagccaagagggaggccgtaccctgcaaagccacagaggcagagctgcccaagaccgtg
ggagcccacttcttgcatcagcataccctgatgtga

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_5|362_aa
MVLTYAQLLEAAKAYGTLHSPKPQPELYLGPFEPRLELEQWNRRSEELQTTEKREARPKP
HKGGRRCPKHRPPSPAGRRQEPRPGYLAWPADSARHDSAESPHKQEGSYQMQPLGFELLS
LHNYKKYFFLSSPAAGATGARRYAQCCSKGPHEGRSGGTPRASTSVRGKHEAQEPWRAGP
LETGILKRIGKPEKRWERCPALRWLKHLFHQVEADSRFALILRNGEVVEKVEVAHVGAVR
VAVLVHQPLPLGGVGVARADVLGLQVLQLAMDGVAVSHLAAFPFALRSEDAVEGDVWRWG
ASVGGLGLIGNGKPKNDWTTSSPENKLLVYFGAVVAARPSLHNRGWITQKSAGASSGPNY
VS

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_5|1089_bp
atggtgctgacatatgctcagcttctggaagctgctaaggcttatggcaccttgcactcc
ccaaagccacagccggagctctacctggggccctttgaaccaagactggaactggagcag
tggaatcgcagaagcgaagagctgcagacgacggagaaaagggaagcgcgccccaagccg
cacaaaggtggccgccggtgtcccaagcaccgaccgccatccccggcaggacgcaggcag
gagcctcggccaggctacctcgcctggcccgcggactccgcgcggcacgactctgcagag
agtccccacaagcaagaaggttcttaccaaatgcagccccttggctttgaacttctcagc
ctccataactataagaaatatttctttctttcctccccagcagctggggctacaggtgca
cgccgctacgcccagtgctgttctaagggtccacatgaaggcaggtcaggcgggactccc
cgggcaagcacttctgtacgcggaaagcacgaggcgcaggagccatggagagccggtcct
ttggagacaggaatacttaagaggattggcaaaccggagaaacgctgggagaggtgcccc
gcactgcggtggctgaagcatcttttccatcaagttgaagcggactcgcgctttgctctc
attctccgcaatggcgaagtagttgagaaggtcgaagtggcccatgtaggagcagtacga
gtcgcggtgttggttcaccagccactcccacttggtggtgtcggcgtggcccgtgccgat
gtacttggactgcaggtgctccagctggctatggatggtgtagcggtcagtcatctcgcc
gctttccccttcgctctcaggtcagaggacgcagtggagggcgatgtctggaggtgggga
gcatccgtgggtggcttggggctgataggaaatgggaaacccaagaatgactggactacg
agcagccccgaaaataaactcttggtgtatttcggagccgtcgtggcggcacggccgtcc
cttcacaaccggggatggattacccagaagtcagcaggcgccagttctggtcccaactat
gtctcttag

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_6|462_aa
MNKEMSGQTFVGKQNSVRMPKIISGLGVQKPNRQWRLVQDLRIINEAVVPLYQAVRNPYT
LLSQIPEETGWFTVLDLKDALFCIAVHPDSQFLLAFEDPLNPTSQLTWTVLPQGFRDSPH
LFGQALAQDLSQFSYLDTLVLRYVDDLLLAAPSETLCHQATQVLLNFLATCGYKVSKLKA
QICSQQVKYLGLKLSKGTRALSEERIQPILAYPHPKTRKQLRGLLGITGFCQIWIPRYSE
IARPLHTLIKKTQKANTHLVRWTPEAEAAFQVLKKALTQAPVLSLPTGQDFFLICHRKNR
NSSRSPYTALWRGKEFLTSDGIPIKHQEAIRRLLLAVQKPKEVAVLHCQGHQKGKEREIE
GNRQVDIEAEKAATQDPPLELLIEGPLVWGNPLWETKPQIEAVRLQIVLQMEPQMQSMTK
IYHGPLDWPARPCSNVNDMEGTPPEEISTARPLLCLNSAGSS

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_6|1389_bp
atgaacaaagaaatgagtggacaaacttttgtaggaaaacaaaactctgtgagaatgccg
aagatcatttcaggactaggagtacagaaacccaacagacagtggaggttagtgcaagat
ctcaggatcatcaatgaggctgttgtccctctataccaagctgtacgtaacccttatact
ctgctttcccaaataccagaggaaacagggtggtttacagtcctggaccttaaggatgcc
cttttctgcatcgctgtacatcctgactctcaattcttgcttgcctttgaagatcctttg
aacccaacgtctcaactcacctggactgttttaccccaagggttcagggatagcccccat
ctatttggccaggcattagcccaagacttgagccagttctcatacctggacactcttgtc
cttcggtacgtggatgatttacttttagccgccccttcagaaaccttgtgccatcaagcc
acccaagtactcttaaatttcctcgccacctgtggctacaaggtttccaaactaaaggct
cagatctgctcacagcaggttaaatacttagggctaaaactatccaaaggcaccagggcc
ctcagtgaggaacgtatccagcctatattggcttatcctcatcctaaaacccgaaaacaa
ctaagagggctccttggcatcacaggcttctgccaaatatggattcccaggtacagcgaa
atagccaggccattacatacactaattaagaaaactcagaaagccaatacccatttagta
agatggacacctgaagcagaagcagcttttcaggtcttaaagaaggccctaacccaagcc
ccagtgttaagcttgccaacggggcaagactttttccttatatgtcacagaaaaaacagg
aatagctctaggagtccttacacagcactatggagaggaaaggaattcctgacttccgac
ggaatacctatcaaacatcaggaagccattaggagattattattggctgtacagaaacct
aaagaggtggcagtcttacactgccagggtcatcagaaaggaaaggaaagggaaatagaa
gggaaccgccaagtggatattgaagccgaaaaagctgcaacgcaggaccctccattagaa
ctgcttatagaaggacccctagtatggggtaatcccctctgggaaaccaaaccccaaatc
gaagctgtaagactacaaattgttcttcaaatggagccccagatgcagtccatgactaag
atctaccacggacccctggactggcctgctagaccgtgctccaatgttaatgacatggaa
ggcacccctcctgaggaaatctcaactgcacgacccctactatgcctcaattcagcagga
agcagttaa

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_7|110_aa
MAAKEDKESKNKLELTEQTGTMSAPVASGLGGVGVLQNLRFFMKKLNTRLGQQSEKAKED
LGEGGAVEGLAAVSHQQEIQMINDNVYELQKCLLLHFLLISHKNLPCDPS

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_7|333_bp
atggctgccaaggaggataaggagagcaagaataagctagagctcacagagcaaactgga
accatgtcagctcccgttgcctcaggtcttggtggtgtgggtgtcctgcagaatctgaga
ttcttcatgaagaagctaaacacacgcctgggccagcagtcagaaaaggcgaaggaggac
cttggggaaggtggagcagttgaaggcctggctgctgtctcccaccaacaagagatccag
atgataaatgacaatgtgtatgagctacaaaaatgtctgctgcttcatttcctcctgatc
tcacataagaatctcccctgtgacccttcctaa

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_8|192_aa
MEQPQGDEMDEGEEEEKKARSQPQRYEIEIKDSLRGISVGKEVETLEPLGIAGSSPASSR
VPGMQDLPQLPQPHPRSETASSVLAAATHRTANVTSAAGIPGGSPARSLPWGPEDERRKC
LGRQTSHSPRRSAQPAGTPLGLREGLERVPGSGRSRAHGLWVGREPALYYPEVMGTVGQQ
RSTGALVPAGLV

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_8|579_bp
atggagcagcctcaaggggatgaaatggatgaaggggaggaagaagagaagaaagccaga
tctcagccccaaaggtatgaaatagaaatcaaagatagtctaaggggaataagtgttggc
aaggaggtggagacactggaacccttgggcattgcaggctcctcgcccgcgtcctcgagg
gtcccagggatgcaggacctgccgcagcttccgcagccacacccacgctcagagacggct
tccagcgtcctcgccgcggcaacgcaccggactgcaaatgtcaccagcgcagcggggatt
cccgggggaagtccagcgcgctccctgccctggggaccagaggacgagcggaggaagtgt
cttgggcggcaaacatcccactccccgcgccggtccgcgcagcccgcgggaacgcccctg
ggcttgcgggaggggctggagcgcgtccccggctccgggcggtcccgagcgcatggactc
tgggtggggcgggaacccgcgctctattatccagaagtcatgggaaccgtgggacagcag
aggagcaccggagccttagtcccagcaggcctggtatag

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_9|144_aa
MCGDEASADHKAAEKLIDEFAKVIADENLTPQQVCNADKTSPFWCYCPGKTLTRAETAST
GIKDAKDRTTVQGCADAAGMHKVSKLEDINEVFFNINKEATVLHSLTADEKAEMVVNEND
CDNSDKEDTINTAEKVPIDDIVDV

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_9|435_bp
atgtgtggtgatgaagcatctgctgatcacaaagcagcagagaaattaattgatgaattt
gccaaggtcattgctgatgaaaatttgactccacaacaagtttgcaatgctgataaaaca
tcaccgttttggtgttattgccccggaaagacactgactagagctgagacagcctctaca
ggaattaaggatgccaaggacagaacaactgtgcagggatgtgctgatgcagcaggcatg
cataaagtcagtaagctggaagacatcaatgaagttttttttaacatcaacaaagaggct
acagttcttcattcattgactgctgatgaaaaagctgaaatggttgtcaatgaaaatgat
tgtgataatagtgacaaggaagataccattaacactgcagaaaaagtgcctatagatgac
atagtggatgtgtga

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_10|287_aa
MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_10|864_bp
atgaaagaccggctagcagaacttctggacttgtccaagcaatatgaccagcagttccca
gacggggacgatgagtttgactcgccccacgaggacatcgtgttcgagacggaccacatc
ctggagtccctgtaccgagacatccgggacattcaggatgaaaaccagctgctggtggcc
gacgtgaagcggctgggaaagcagaacgcccgcttcctcacgtccatgcggcgcctcagc
agcatcaagcgcgacaccaactccatcgccaaggccatcaaggcccggggcgaggtcatc
cactgcaagctgcgcgccatgaaggagctgagcgaggcggctgaggcccagcacggcccg
cactcggcagtggcgcgcatttcgcgggcgcagtacaacgcgctcaccctcaccttccag
cgcgccatgcacgactacaaccaggccgagatgaagcagcgcgacaactgcaagatccgc
atccagcgccagctggagatcatgggcaaggaagtctcgggcgaccagatcgaggacatg
ttcgagcagggtaagtgggacgtgttttccgagaacttgctggccgacgtgaagggcgcg
cgggccgccctcaacgagatcgagagccgccaccgcgaactgctgcgcctggagagccgc
atccgcgacgtacacgagctcttcttgcagatggcggtgctggtggagaagcaggccgac
accctgaacgtcatcgagctcaacgtacaaaagacggtcgactacaccggccaggccaag
gcgcaggtgcggaaggccgtgcagtacgaggagaagaacccctgccggaccctctgctgc
ttctgctgtccctgcctcaagtag

>gi568815592r:143995240_144195497|GENSCAN_predicted_peptide_11|85_aa
MGLEKDCLGRSRSCRRTVSLKSLWIVQNSNSKGLLFLQALKTKERMEDPKLPLLGAASSL
PAEADPAGRLLLGPEVPLSHQQPTL

>gi568815592r:143995240_144195497|GENSCAN_predicted_CDS_11|258_bp
atgggactggagaaagactgcttgggaagaagcagatcatgcaggagaacggtcagtctg
aaaagcctgtggattgtgcagaacagtaacagcaagggtcttcttttcctacaagcgttg
aagaccaaggagagaatggaggaccctaaactgcccttgcttggagctgcaagttctctc
cctgctgaagctgaccctgcaggtcgactgctgcttgggcctgaagtgcctctcagccac
cagcagccaactctttga