Result of FASTA (omim) for pF1KB6336
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6336, 290 aa
  1>>>pF1KB6336 290 - 290 aa - 290 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1339+/-0.000305; mu= 5.3190+/- 0.019
 mean_var=222.1474+/-43.143, 0's: 0 Z-trim(123.9): 72  B-trim: 50 in 1/57
 Lambda= 0.086051
 statistics sampled from 44517 (44614) to 44517 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.523), width:  16
 Scan time:  7.490

The best scores are:                                      opt bits E(85289)
NP_001116293 (OMIM: 600960) protein SET isoform 1  ( 290) 1968 256.1 5.9e-68
XP_016870504 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
XP_016870503 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
XP_016870502 (OMIM: 600960) PREDICTED: protein SET ( 309) 1920 250.1 3.9e-66
NP_003002 (OMIM: 600960) protein SET isoform 2 [Ho ( 277) 1715 224.6 1.6e-58
NP_001234930 (OMIM: 600960) protein SET isoform 4  ( 266) 1712 224.2 2.1e-58
NP_001234929 (OMIM: 600960) protein SET isoform 3  ( 268) 1708 223.7 2.9e-58
XP_016870505 (OMIM: 600960) PREDICTED: protein SET ( 296) 1667 218.7 1.1e-56
NP_277047 (OMIM: 614721) testis-specific Y-encoded ( 417)  418 63.8 6.5e-10
NP_071400 (OMIM: 300564) testis-specific Y-encoded ( 693)  403 62.1 3.4e-09
XP_006724655 (OMIM: 300564) PREDICTED: testis-spec ( 694)  403 62.1 3.4e-09
NP_003300 (OMIM: 604714,608800) testis-specific Y- ( 437)  378 58.8 2.1e-08
NP_001184171 (OMIM: 480100) testis-specific Y-enco ( 294)  336 53.5 5.9e-07
NP_003299 (OMIM: 480100) testis-specific Y-encoded ( 308)  336 53.5 6.1e-07
XP_016885553 (OMIM: 480100) PREDICTED: testis-spec ( 288)  317 51.1   3e-06
NP_001307893 (OMIM: 480100) testis-specific Y-enco ( 221)  303 49.2 8.2e-06


>>NP_001116293 (OMIM: 600960) protein SET isoform 1 [Hom  (290 aa)
 initn: 1968 init1: 1968 opt: 1968  Z-score: 1340.9  bits: 256.1 E(85289): 5.9e-68
Smith-Waterman score: 1968; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
              190       200       210       220       230       240

              250       260       270       280       290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
              250       260       270       280       290

>>XP_016870504 (OMIM: 600960) PREDICTED: protein SET iso  (309 aa)
 initn: 2022 init1: 1920 opt: 1920  Z-score: 1308.4  bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
              190       200       210       220       230       240

              250       260       270       280       290          
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD          
       :::::::::::::::::::::::::::::::::::::::::::  :              
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
              250       260       270       280       290       300

XP_016 LFWGVYIYI
                

>>XP_016870503 (OMIM: 600960) PREDICTED: protein SET iso  (309 aa)
 initn: 2022 init1: 1920 opt: 1920  Z-score: 1308.4  bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
              190       200       210       220       230       240

              250       260       270       280       290          
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD          
       :::::::::::::::::::::::::::::::::::::::::::  :              
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
              250       260       270       280       290       300

XP_016 LFWGVYIYI
                

>>XP_016870502 (OMIM: 600960) PREDICTED: protein SET iso  (309 aa)
 initn: 2022 init1: 1920 opt: 1920  Z-score: 1308.4  bits: 250.1 E(85289): 3.9e-66
Smith-Waterman score: 1920; 99.3% identity (99.3% similar) in 286 aa overlap (1-286:1-286)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
              190       200       210       220       230       240

              250       260       270       280       290          
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD          
       :::::::::::::::::::::::::::::::::::::::::::  :              
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
              250       260       270       280       290       300

XP_016 LFWGVYIYI
                

>>NP_003002 (OMIM: 600960) protein SET isoform 2 [Homo s  (277 aa)
 initn: 1715 init1: 1715 opt: 1715  Z-score: 1171.4  bits: 224.6 E(85289): 1.6e-58
Smith-Waterman score: 1715; 96.2% identity (97.4% similar) in 266 aa overlap (25-290:12-277)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
                               : .:   :  . .:::::::::::::::::::::::
NP_003              MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNE
                            10        20        30        40       

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
        50        60        70        80        90       100       

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       110       120       130       140       150       160       

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       170       180       190       200       210       220       

              250       260       270       280       290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
       230       240       250       260       270       

>>NP_001234930 (OMIM: 600960) protein SET isoform 4 [Hom  (266 aa)
 initn: 1712 init1: 1712 opt: 1712  Z-score: 1169.7  bits: 224.2 E(85289): 2.1e-58
Smith-Waterman score: 1712; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:10-266)

            10        20        30        40        50        60   
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
                                     :   ::::::::::::::::::::::::::
NP_001                      MMPRSHQPPPPPHEKEQQEAIEHIDEVQNEIDRLNEQAS
                                    10        20        30         

            70        80        90       100       110       120   
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
      40        50        60        70        80        90         

           130       140       150       160       170       180   
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
     100       110       120       130       140       150         

           190       200       210       220       230       240   
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
     160       170       180       190       200       210         

           250       260       270       280       290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
       :::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
     220       230       240       250       260      

>>NP_001234929 (OMIM: 600960) protein SET isoform 3 [Hom  (268 aa)
 initn: 1706 init1: 1706 opt: 1708  Z-score: 1166.9  bits: 223.7 E(85289): 2.9e-58
Smith-Waterman score: 1708; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:12-268)

            10        20        30        40        50        60   
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
                                     :   ::::::::::::::::::::::::::
NP_001                    MGCRDLLPSLKPTLLEKEQQEAIEHIDEVQNEIDRLNEQAS
                                  10        20        30        40 

            70        80        90       100       110       120   
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
              50        60        70        80        90       100 

           130       140       150       160       170       180   
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
             110       120       130       140       150       160 

           190       200       210       220       230       240   
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
             170       180       190       200       210       220 

           250       260       270       280       290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
       :::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
             230       240       250       260        

>>XP_016870505 (OMIM: 600960) PREDICTED: protein SET iso  (296 aa)
 initn: 1760 init1: 1658 opt: 1667  Z-score: 1138.9  bits: 218.7 E(85289): 1.1e-56
Smith-Waterman score: 1667; 95.4% identity (96.6% similar) in 262 aa overlap (25-286:12-273)

               10        20        30        40        50        60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
                               : .:   :  . .:::::::::::::::::::::::
XP_016              MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNE
                            10        20        30        40       

               70        80        90       100       110       120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
        50        60        70        80        90       100       

              130       140       150       160       170       180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
       110       120       130       140       150       160       

              190       200       210       220       230       240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
       170       180       190       200       210       220       

              250       260       270       280       290          
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD          
       :::::::::::::::::::::::::::::::::::::::::::  :              
XP_016 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEVKENLAKPTKITFKEFM
       230       240       250       260       270       280       

XP_016 LFWGVYIYI
       290      

>>NP_277047 (OMIM: 614721) testis-specific Y-encoded-lik  (417 aa)
 initn: 561 init1: 386 opt: 418  Z-score: 299.0  bits: 63.8 E(85289): 6.5e-10
Smith-Waterman score: 555; 37.9% identity (68.8% similar) in 240 aa overlap (25-257:175-400)

                     10        20        30        40              
pF1KB6       MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQ-------QEAIEH
                                     :.::.:::  :: :..        . ... 
NP_277 AGKKAPETCSTAGRGPQVIAGGRQKKGAAGENTSVSAGEEKKEERDAGSGPPATEGSMDT
          150       160       170       180       190       200    

        50        60        70        80        90       100       
pF1KB6 IDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSA
       ...:: ... .: ::..  :.. .:...::   ...:..:: .::.::  .: ::::...
NP_277 LENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHPQLAS
          210       220       230       240       250       260    

       110       120       130       140       150       160       
pF1KB6 LLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSK
       .:. ...:.: ::. .:: :.   . ::.: ::::.::::.:::: ::.  . ::.  :.
NP_277 FLNSQEKEVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQVVSR
          270       280       290       300       310       320    

       170       180       190       200       210       220       
pF1KB6 STEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWP
       :: :.:  :.::   .: .:..   .:      ::: ::..::.  .:.. :.:....::
NP_277 STPIQWLPGHDL---QSLSQGNPENNR------SFFGWFSNHSSIESDKIVEIINEELWP
          330          340             350       360       370     

       230       240       250       260       270       280       
pF1KB6 NPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEG
       ::::.::.      ::   :   . : ..:                              
NP_277 NPLQFYLLS-----EGARVEKGKEKEGRQGPGKQPMETTQPGVSQSN             
         380            390       400       410                    

>>NP_071400 (OMIM: 300564) testis-specific Y-encoded-lik  (693 aa)
 initn: 566 init1: 400 opt: 403  Z-score: 286.2  bits: 62.1 E(85289): 3.4e-09
Smith-Waterman score: 537; 38.3% identity (77.0% similar) in 196 aa overlap (40-234:210-396)

      10        20        30        40         50        60        
pF1KB6 PPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAI-EHIDEVQNEIDRLNEQASEEILK
                                     :..:.: . ....: ... .: .:.. .:.
NP_071 RESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLR
     180       190       200       210       220       230         

       70        80        90       100       110       120        
pF1KB6 VEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEF
       ...:. ..:.::...:. .: .::.::: .:.:::..: :....::. ..::: ..: ..
NP_071 LKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDL
     240       250       260       270       280       290         

      130       140       150       160       170       180        
pF1KB6 EDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQN
       . :. ::.. .::. :::: : :. :::. :.::   :.:: :.:. :..          
NP_071 RHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQE---------P
     300       310       320       330       340                350

      190       200       210       220       230       240        
pF1KB6 KASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEED
       .: :. ...  .:::.::..::   ::...:.::.:.: :::.:::              
NP_071 QARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEM
              360       370       380       390       400       410

      250       260       270       280       290                  
pF1KB6 DDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD                  
                                                                   
NP_071 KKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEIT
              420       430       440       450       460       470




290 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:45:40 2016 done: Fri Nov  4 22:45:41 2016
 Total Scan time:  7.490 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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