Result of FASTA (omim) for pF1KE0541
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0541, 221 aa
  1>>>pF1KE0541 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9554+/-0.000299; mu= 16.1457+/- 0.019
 mean_var=68.9440+/-13.808, 0's: 0 Z-trim(117.7): 36  B-trim: 66 in 1/53
 Lambda= 0.154464
 statistics sampled from 29966 (30004) to 29966 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.352), width:  16
 Scan time:  5.790

The best scores are:                                      opt bits E(85289)
NP_071327 (OMIM: 607551) stromal cell-derived fact ( 221) 1537 350.9   1e-96
NP_008854 (OMIM: 602934) stromal cell-derived fact ( 211)  922 213.8 1.7e-55
XP_011523408 (OMIM: 602934) PREDICTED: stromal cel ( 230)  525 125.4 7.9e-29
XP_016876733 (OMIM: 236670,607439,613150,613156,61 ( 448)  219 57.4 4.4e-08
XP_016876734 (OMIM: 236670,607439,613150,613156,61 ( 448)  219 57.4 4.4e-08
XP_011534981 (OMIM: 236670,607439,613150,613156,61 ( 511)  219 57.4 4.9e-08
XP_011534978 (OMIM: 236670,607439,613150,613156,61 ( 702)  219 57.6 6.3e-08
NP_037514 (OMIM: 236670,607439,613150,613156,61315 ( 750)  219 57.6 6.6e-08
XP_011534979 (OMIM: 236670,607439,613150,613156,61 ( 660)  218 57.3   7e-08
XP_011534977 (OMIM: 236670,607439,613150,613156,61 ( 813)  219 57.6   7e-08
XP_011516445 (OMIM: 236670,607423,609308,613155) P ( 642)  186 50.2 9.6e-06
XP_011516447 (OMIM: 236670,607423,609308,613155) P ( 595)  167 45.9 0.00017
NP_001129586 (OMIM: 236670,607423,609308,613155) p ( 608)  167 45.9 0.00017
XP_005272216 (OMIM: 236670,607423,609308,613155) P ( 630)  167 45.9 0.00018
XP_006716995 (OMIM: 236670,607423,609308,613155) P ( 630)  167 45.9 0.00018
XP_011516444 (OMIM: 236670,607423,609308,613155) P ( 644)  167 45.9 0.00018
NP_001070834 (OMIM: 236670,607423,609308,613155) p ( 671)  167 45.9 0.00019
XP_011516443 (OMIM: 236670,607423,609308,613155) P ( 676)  167 45.9 0.00019
XP_005272215 (OMIM: 236670,607423,609308,613155) P ( 693)  167 46.0 0.00019
XP_016869692 (OMIM: 236670,607423,609308,613155) P ( 693)  167 46.0 0.00019
XP_011516442 (OMIM: 236670,607423,609308,613155) P ( 698)  167 46.0 0.00019
NP_001070833 (OMIM: 236670,607423,609308,613155) p ( 725)  167 46.0  0.0002
NP_001129585 (OMIM: 236670,607423,609308,613155) p ( 725)  167 46.0  0.0002
XP_005272213 (OMIM: 236670,607423,609308,613155) P ( 747)  167 46.0  0.0002
NP_009102 (OMIM: 236670,607423,609308,613155) prot ( 747)  167 46.0  0.0002


>>NP_071327 (OMIM: 607551) stromal cell-derived factor 2  (221 aa)
 initn: 1537 init1: 1537 opt: 1537  Z-score: 1857.6  bits: 350.9 E(85289): 1e-96
Smith-Waterman score: 1537; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KE0 MWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHSHDIKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHSHDIKY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 PSPLSNNQEVSAFGEDGEGDDLDLWTVRCSGQHWEREAAVRFQHVGTSVFLSVTGEQYGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 PSPLSNNQEVSAFGEDGEGDDLDLWTVRCSGQHWEREAAVRFQHVGTSVFLSVTGEQYGS
              130       140       150       160       170       180

              190       200       210       220 
pF1KE0 PIRGQHEVHGMPSANTHNTWKAMEGIFIKPSVEPSAGHDEL
       :::::::::::::::::::::::::::::::::::::::::
NP_071 PIRGQHEVHGMPSANTHNTWKAMEGIFIKPSVEPSAGHDEL
              190       200       210       220 

>>NP_008854 (OMIM: 602934) stromal cell-derived factor 2  (211 aa)
 initn: 915 init1: 899 opt: 922  Z-score: 1117.2  bits: 213.8 E(85289): 1.7e-55
Smith-Waterman score: 922; 65.7% identity (81.6% similar) in 207 aa overlap (17-221:7-211)

               10        20        30        40        50        60
pF1KE0 MWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHSHDIKY
                       :::. :  . ::.. :  .::::::.:::::.: :::::::..:
NP_008           MAVVPLLLLGGLWSAVGASSLG--VVTCGSVVKLLNTRHNVRLHSHDVRY
                         10        20          30        40        

               70        80        90       100       110       120
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHF
       :::::::::::: . ::.:::::::: :   : ::.:..::: .::::: ::.:::.:::
NP_008 GSGSGQQSVTGVTSVDDSNSYWRIRGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHF
       50        60        70        80        90       100        

              130       140       150       160       170       180
pF1KE0 PSPLSNNQEVSAFGEDGEGDDLDLWTVRCSGQHWEREAAVRFQHVGTSVFLSVTGEQYGS
        ::::.:::::::::.:::: :: ::: :.: .: :.. :::.: .: :.::::::::: 
NP_008 TSPLSGNQEVSAFGEEGEGDYLDDWTVLCNGPYWVRDGEVRFKHSSTEVLLSVTGEQYGR
      110       120       130       140       150       160        

              190       200       210         220 
pF1KE0 PIRGQHEVHGMPSANTHNTWKAMEGIFIKPS--VEPSAGHDEL
       :: ::.::::: . . .: ::::::::.:::  ..  : : ::
NP_008 PISGQKEVHGMAQPSQNNYWKAMEGIFMKPSELLKAEAHHAEL
      170       180       190       200       210 

>>XP_011523408 (OMIM: 602934) PREDICTED: stromal cell-de  (230 aa)
 initn: 521 init1: 505 opt: 525  Z-score: 638.5  bits: 125.4 E(85289): 7.9e-29
Smith-Waterman score: 874; 60.2% identity (74.8% similar) in 226 aa overlap (17-221:7-230)

               10        20        30        40        50        60
pF1KE0 MWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHSHDIKY
                       :::. :  . ::.. :  .::::::.:::::.: :::::::..:
XP_011           MAVVPLLLLGGLWSAVGASSLG--VVTCGSVVKLLNTRHNVRLHSHDVRY
                         10        20          30        40        

               70        80        90       100       110       120
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHF
       :::::::::::: . ::.:::::::: :   : ::.:..::: .::::: ::.:::.:::
XP_011 GSGSGQQSVTGVTSVDDSNSYWRIRGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHF
       50        60        70        80        90       100        

                                 130       140       150       160 
pF1KE0 PSPLSNNQ-------------------EVSAFGEDGEGDDLDLWTVRCSGQHWEREAAVR
        ::::.::                   :::::::.:::: :: ::: :.: .: :.. ::
XP_011 TSPLSGNQRRKQRLKGFTEEGIKLRFKEVSAFGEEGEGDYLDDWTVLCNGPYWVRDGEVR
      110       120       130       140       150       160        

             170       180       190       200       210           
pF1KE0 FQHVGTSVFLSVTGEQYGSPIRGQHEVHGMPSANTHNTWKAMEGIFIKPS--VEPSAGHD
       :.: .: :.::::::::: :: ::.::::: . . .: ::::::::.:::  ..  : : 
XP_011 FKHSSTEVLLSVTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGIFMKPSELLKAEAHHA
      170       180       190       200       210       220        

     220 
pF1KE0 EL
       ::
XP_011 EL
      230

>>XP_016876733 (OMIM: 236670,607439,613150,613156,613158  (448 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 266.0  bits: 57.4 E(85289): 4.4e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:33-232)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
XP_016 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
             10        20        30        40        50        60  

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
XP_016 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
             70         80        90       100       110       120 

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
XP_016 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
             130       140       150       160       170       180 

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
XP_016 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
             190       200       210         220        230        

XP_016 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
      240       250       260       270       280       290        

>>XP_016876734 (OMIM: 236670,607439,613150,613156,613158  (448 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 266.0  bits: 57.4 E(85289): 4.4e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:33-232)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
XP_016 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
             10        20        30        40        50        60  

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
XP_016 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
             70         80        90       100       110       120 

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
XP_016 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
             130       140       150       160       170       180 

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
XP_016 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
             190       200       210         220        230        

XP_016 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
      240       250       260       270       280       290        

>>XP_011534981 (OMIM: 236670,607439,613150,613156,613158  (511 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 265.2  bits: 57.4 E(85289): 4.9e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:33-232)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
XP_011 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
             10        20        30        40        50        60  

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
XP_011 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
             70         80        90       100       110       120 

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
XP_011 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
             130       140       150       160       170       180 

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
XP_011 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
             190       200       210         220        230        

XP_011 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
      240       250       260       270       280       290        

>>XP_011534978 (OMIM: 236670,607439,613150,613156,613158  (702 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 263.3  bits: 57.6 E(85289): 6.3e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:224-423)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
XP_011 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
           200       210       220       230       240       250   

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
XP_011 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
           260        270       280       290       300       310  

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
XP_011 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
            320       330       340       350       360       370  

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
XP_011 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
            380       390       400         410        420         

XP_011 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
     430       440       450       460       470       480         

>>NP_037514 (OMIM: 236670,607439,613150,613156,613158) p  (750 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 262.9  bits: 57.6 E(85289): 6.6e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:335-534)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
NP_037 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
          310       320       330       340       350       360    

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
NP_037 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
          370        380       390       400       410       420   

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
NP_037 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
           430       440       450       460       470       480   

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
NP_037 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
           490       500       510       520          530       540

NP_037 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
              550       560       570       580       590       600

>>XP_011534979 (OMIM: 236670,607439,613150,613156,613158  (660 aa)
 initn:  93 init1:  93 opt: 218  Z-score: 262.5  bits: 57.3 E(85289): 7e-08
Smith-Waterman score: 225; 29.4% identity (56.6% similar) in 235 aa overlap (10-221:153-381)

                                    10        20         30        
pF1KE0                      MWSAGRGGAAWPVLLGLLLAL-LVPGGGAAKTGAELVTC
                                     .: : .. : .: :  . .::   : :.: 
XP_011 YDGTFLFQKPGDKYEHHSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTF
            130       140       150       160       170       180  

           40        50         60          70        80        90 
pF1KE0 ----GSVLKLLNTHHRV-RLHSHDIKY--GSGSGQQSVTGVEASDDANSYWRIRGGSEGG
           :::. . : .  .  ::::   :  : :. ::.:: .    : :. : :.  . ..
XP_011 DLAYGSVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVT-TYLHKDYNNLWIIKKHNTNS
            190       200       210       220        230       240 

                  100       110       120        130       140     
pF1KE0 CPRGS--PV---RCGQAVRLTHVLTGKNLHTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLW
        :     ::   : :. .:: :  :..:::.:.  .:.. .. .:...: .: ::. :.:
XP_011 DPLDPSFPVEFVRHGDIIRLEHKETSRNLHSHYHEAPMTRKHYQVTGYGINGTGDSNDFW
             250       260       270       280       290       300 

         150            160       170       180         190        
pF1KE0 TVRCSGQHW-ER----EAAVRFQHVGTSVFLSVTGEQYGSPIRG--QHEVHGMP--SANT
        ..  .... .:    .. .:: :. :.  :. .:.    :  :  : ::   :  . . 
XP_011 RIEVVNRKFGNRIKVLRSRIRFIHLVTGCVLGSSGKVL--PKWGWEQLEVTCTPYLKETL
             310       320       330         340       350         

        200       210       220                                    
pF1KE0 HNTWKAMEGIFIKPSVEPSAGHDEL                                   
       .. :.. .   :.:.. :. . : :                                   
XP_011 NSIWNVED--HINPKL-PNISLDVLQPSFPEILLESHMVMIRGNSGLKPKDNEFTSKPWH
     360         370        380       390       400       410      

>>XP_011534977 (OMIM: 236670,607439,613150,613156,613158  (813 aa)
 initn:  93 init1:  93 opt: 219  Z-score: 262.5  bits: 57.6 E(85289): 7e-08
Smith-Waterman score: 219; 28.4% identity (57.8% similar) in 204 aa overlap (34-221:335-534)

            10        20        30        40        50         60  
pF1KE0 AGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRV-RLHSHDIKY--
                                     : .. :::. . : .  .  ::::   :  
XP_011 LSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPE
          310       320       330       340       350       360    

               70        80        90            100       110     
pF1KE0 GSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGS--PV---RCGQAVRLTHVLTGKNL
       : :. ::.:: .    : :. : :.  . .. :     ::   : :. .:: :  :..::
XP_011 GIGARQQQVT-TYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETSRNL
          370        380       390       400       410       420   

         120        130       140       150            160         
pF1KE0 HTHHFPSPLSNNQ-EVSAFGEDGEGDDLDLWTVRCSGQHW-ER----EAAVRFQHVGTSV
       :.:.  .:.. .. .:...: .: ::. :.: ..  .... .:    .. .:: :. :. 
XP_011 HSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGC
           430       440       450       460       470       480   

     170       180       190         200       210       220       
pF1KE0 FLSVTGEQYGSPIRGQHEVHGMP--SANTHNTWKAMEGIFIKPSVEPSAGHDEL      
        :. .:.   .    : ::   :  . . .. :.. .   :.:.. :. . : :      
XP_011 VLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVED--HINPKL-PNISLDVLQPSFPE
           490       500       510       520          530       540

XP_011 ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
              550       560       570       580       590       600




221 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 00:25:33 2016 done: Thu Nov  3 00:25:34 2016
 Total Scan time:  5.790 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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