Result of FASTA (omim) for pF1KB6753
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6753, 105 aa
  1>>>pF1KB6753 105 - 105 aa - 105 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6603+/-0.000358; mu= 12.9617+/- 0.022
 mean_var=67.4247+/-13.383, 0's: 0 Z-trim(114.5): 82  B-trim: 720 in 1/53
 Lambda= 0.156194
 statistics sampled from 24215 (24324) to 24215 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.285), width:  16
 Scan time:  3.650

The best scores are:                                      opt bits E(85289)
NP_005611 (OMIM: 603114) protein S100-A11 [Homo sa ( 105)  680 161.5 2.3e-40
NP_006262 (OMIM: 176940) protein S100-A1 [Homo sap (  94)  265 67.9   3e-12
NP_002957 (OMIM: 114085) protein S100-A10 [Homo sa (  97)  254 65.5 1.7e-11
NP_005971 (OMIM: 600614) protein S100-P [Homo sapi (  95)  250 64.6 3.1e-11
XP_011541546 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_016864661 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_011541542 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_011541541 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_016864662 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_016864660 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_011541543 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
NP_570128 (OMIM: 610103) protein S100-Z [Homo sapi (  99)  241 62.5 1.3e-10
XP_011541547 (OMIM: 610103) PREDICTED: protein S10 (  99)  241 62.5 1.3e-10
XP_016883913 (OMIM: 176990) PREDICTED: protein S10 (  92)  237 61.6 2.3e-10
NP_006263 (OMIM: 176990) protein S100-B [Homo sapi (  92)  237 61.6 2.3e-10
NP_062427 (OMIM: 114210) protein S100-A4 [Homo sap ( 101)  216 56.9 6.6e-09
NP_002952 (OMIM: 114210) protein S100-A4 [Homo sap ( 101)  216 56.9 6.6e-09
NP_005612 (OMIM: 603112) protein S100-A12 [Homo sa (  92)  203 54.0 4.7e-08
XP_011507833 (OMIM: 616284) PREDICTED: filaggrin-2 (2239)  215 57.9 7.4e-08
NP_001014364 (OMIM: 616284) filaggrin-2 [Homo sapi (2391)  215 57.9 7.8e-08
NP_002956 (OMIM: 123886) protein S100-A9 [Homo sap ( 114)  197 52.7 1.4e-07
NP_005969 (OMIM: 176993) protein S100-A2 [Homo sap (  97)  189 50.8 4.4e-07
NP_002951 (OMIM: 176992) protein S100-A3 [Homo sap ( 101)  189 50.8 4.5e-07
XP_016857520 (OMIM: 176991) PREDICTED: protein S10 (  92)  184 49.7 9.2e-07
XP_016857521 (OMIM: 176991) PREDICTED: protein S10 (  92)  184 49.7 9.2e-07
NP_002953 (OMIM: 176991) protein S100-A5 [Homo sap (  92)  184 49.7 9.2e-07
XP_011508162 (OMIM: 176991) PREDICTED: protein S10 ( 104)  184 49.7   1e-06
XP_016857519 (OMIM: 176991) PREDICTED: protein S10 ( 110)  184 49.7   1e-06
XP_016857518 (OMIM: 176991) PREDICTED: protein S10 ( 133)  184 49.8 1.2e-06
XP_016857522 (OMIM: 114110) PREDICTED: protein S10 (  90)  178 48.3 2.3e-06
NP_055439 (OMIM: 114110) protein S100-A6 [Homo sap (  90)  178 48.3 2.3e-06
NP_005970 (OMIM: 601989) protein S100-A13 [Homo sa (  98)  174 47.4 4.6e-06
XP_016857525 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
XP_016857523 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
NP_001019383 (OMIM: 601989) protein S100-A13 [Homo (  98)  174 47.4 4.6e-06
NP_001019382 (OMIM: 601989) protein S100-A13 [Homo (  98)  174 47.4 4.6e-06
XP_011508165 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
NP_001019381 (OMIM: 601989) protein S100-A13 [Homo (  98)  174 47.4 4.6e-06
XP_005245491 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
XP_011508164 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
XP_011508166 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
NP_001019384 (OMIM: 601989) protein S100-A13 [Homo (  98)  174 47.4 4.6e-06
XP_016857524 (OMIM: 601989) PREDICTED: protein S10 (  98)  174 47.4 4.6e-06
NP_002954 (OMIM: 600353) protein S100-A7 [Homo sap ( 101)  162 44.8 3.1e-05
NP_002007 (OMIM: 135940,146700,605803) filaggrin [ (4061)  179 50.0 3.2e-05
NP_009044 (OMIM: 190370) trichohyalin [Homo sapien (1943)  173 48.4 4.7e-05
NP_004048 (OMIM: 302020) protein S100-G [Homo sapi (  79)  156 43.3 6.5e-05
XP_016885330 (OMIM: 302020) PREDICTED: protein S10 (  79)  156 43.3 6.5e-05
NP_001116437 (OMIM: 613259) repetin [Homo sapiens] ( 784)  164 46.0 9.9e-05
NP_057274 (OMIM: 611312) cornulin [Homo sapiens]   ( 495)  159 44.7 0.00016


>>NP_005611 (OMIM: 603114) protein S100-A11 [Homo sapien  (105 aa)
 initn: 680 init1: 680 opt: 680  Z-score: 845.7  bits: 161.5 E(85289): 2.3e-40
Smith-Waterman score: 680; 100.0% identity (100.0% similar) in 105 aa overlap (1-105:1-105)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
               10        20        30        40        50        60

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :::::::::::::::::::::::::::::::::::::::::::::
NP_005 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
               70        80        90       100     

>>NP_006262 (OMIM: 176940) protein S100-A1 [Homo sapiens  (94 aa)
 initn: 258 init1: 244 opt: 265  Z-score: 340.9  bits: 67.9 E(85289): 3e-12
Smith-Waterman score: 265; 43.2% identity (79.5% similar) in 88 aa overlap (8-95:3-90)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
              .: :  .:.:: ::. ..::.: .: ::: :.  ...:::..:   :::  ..
NP_006      MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :..::.:: :.::..::.:.. :...:..::.. :          
NP_006 DKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWENS      
          60        70        80        90          

>>NP_002957 (OMIM: 114085) protein S100-A10 [Homo sapien  (97 aa)
 initn: 235 init1: 163 opt: 254  Z-score: 327.4  bits: 65.5 E(85289): 1.7e-11
Smith-Waterman score: 254; 40.0% identity (75.6% similar) in 90 aa overlap (7-96:2-88)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             :.. :. .:... .:.:.::  ::   :.: ..  .:. :. .: .::::: ..
NP_002      MPSQMEHAMETMMFTFHKFAGDKGY---LTKEDLRVLMEKEFPGFLENQKDPLAV
                    10        20           30        40        50  

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :..:: ::   ::.. :. :..::.::..::.: :.         
NP_002 DKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQKGKK
             60        70        80        90       

>>NP_005971 (OMIM: 600614) protein S100-P [Homo sapiens]  (95 aa)
 initn: 250 init1: 250 opt: 250  Z-score: 322.6  bits: 64.6 E(85289): 3.1e-11
Smith-Waterman score: 250; 40.7% identity (74.7% similar) in 91 aa overlap (8-98:2-92)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
              :: :  .  .: ::..:.:..: . ::.: :.  .:. :: .: .. ::  ..
NP_005       MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAV
                     10        20        30        40        50    

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :...: ::.:.:.:.:::::. ...... :::  : ::       
NP_005 DKLLKDLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK    
           60        70        80        90         

>>XP_011541546 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_011      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_011 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>XP_016864661 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_016      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_016 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>XP_011541542 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_011      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_011 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>XP_011541541 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_011      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_011 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>XP_016864662 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_016      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_016 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>XP_016864660 (OMIM: 610103) PREDICTED: protein S100-Z   (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 311.4  bits: 62.5 E(85289): 1.3e-10
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
XP_016      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
XP_016 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          




105 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:48:52 2016 done: Fri Nov  4 23:48:53 2016
 Total Scan time:  3.650 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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