GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:16:38

Sequence gi568815576f:40964052_41164633 : 200582 bp : 45.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    557    552    6                               1.05
 1.05 Term -  13388  13190  199  1  1  116   47   107 0.674   6.27
 1.04 Intr -  32554  32443  112  2  1   73  110    20 0.393   2.14
 1.03 Intr -  39329  39292   38  1  2  105   86    49 0.352   4.31
 1.02 Intr -  45637  45543   95  1  2  102   49    56 0.215   1.86
 1.01 Init -  46945  46916   30  1  0   34  102    18 0.241  -2.33
 1.00 Prom -  52424  52385   40                              -4.96

 2.00 Prom +  57557  57596   40                              -2.06
 2.01 Init +  65715  65762   48  2  0   65   97    29 0.308   2.45
 2.02 Intr +  70470  70580  111  2  0   50   79    92 0.394   5.08
 2.03 Term +  85324  85551  228  0  0   87   49   102 0.201   2.83
 2.04 PlyA +  90075  90080    6                               1.05

 3.00 Prom +  94742  94781   40                              -3.76
 3.01 Sngl + 100001 100585  585  1  0   99   46   737 0.996  66.79
 3.02 PlyA + 100633 100638    6                               1.05

 4.04 PlyA - 102101 102096    6                               1.05
 4.03 Term - 110637 110113  525  0  0  -55   43  1090 0.873  84.46
 4.02 Intr - 110910 110731  180  0  0  -30   51   294 0.296  13.96
 4.01 Init - 111188 111057  132  2  0   95   52   164 0.231  13.64
 4.00 Prom - 112094 112055   40                              -5.76

 5.00 Prom + 121318 121357   40                              -6.56
 5.01 Init + 128954 129047   94  1  1   71   92   126 0.859  11.84
 5.02 Intr + 153136 153770  635  2  2  119  115   326 0.995  30.25
 5.03 Intr + 161813 161989  177  1  0   72  101   180 0.988  17.82
 5.04 Intr + 163436 163697  262  1  1   74  115   191 0.985  17.46
 5.05 Intr + 167337 167582  246  1  0   93   80   175 0.694  14.63
 5.06 Intr + 171762 171855   94  1  1   57  106    -1 0.214  -2.38
 5.07 Intr + 173602 173739  138  1  0   24   93   171 0.231  10.78
 5.08 Intr + 176089 176206  118  1  1   66   72    71 0.985   3.77
 5.09 Intr + 176997 177171  175  2  1   22   94   141 0.988   7.61
 5.10 Intr + 183786 183895  110  1  2   63   65    49 0.550   0.10
 5.11 Intr + 184987 185124  138  0  0  104   55    40 0.599   2.96
 5.12 Intr + 187782 187961  180  2  0   94   78   181 0.858  17.76
 5.13 Intr + 188155 188299  145  0  1   48   70    85 0.892   2.56
 5.14 Intr + 190944 191062  119  1  2   72   95    40 0.895   3.28
 5.15 Intr + 193118 193357  240  1  0  112  116   210 0.999  23.95
 5.16 Intr + 194313 194449  137  2  2  100  115    36 0.554   6.87
 5.17 Intr + 196591 196671   81  1  0   65  111    16 0.352   0.35
 5.18 Intr + 198672 198728   57  0  0   93   93    16 0.060   0.60
 5.19 Intr + 200002 200079   78  1  0   86  106    -2 0.047   0.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:40964052_41164633|GENSCAN_predicted_peptide_1|157_aa
MPLKDSVLQKPLRGQLGPEPVPTPMASLFQACLPGEVQDAAGFSTWYKKSGPEKDLFTWL
FESWLLVNKLVLNPALHTTVFPCLGFARGPSRAPTTLEQVIVCPGDLVWDSPPMSDDCLH
QVSQLACHIPKEDFPAPLLEVATQFYSMTPQPSSLST

>gi568815576f:40964052_41164633|GENSCAN_predicted_CDS_1|474_bp
atgcctctgaaagacagtgtcctgcaaaagcctttgcgaggtcagcttggccctgagcct
gtgcccacacccatggcctccctctttcaggcctgtttacctggtgaggtgcaggatgct
gcagggttctccacctggtacaagaagagtggcccagagaaagacctttttacttggctc
ttcgaaagctggctcttggtcaacaaacttgtcctcaaccccgcccttcacaccacagtc
ttcccctgcctggggtttgctcgggggcccagcagagctccaaccacactggagcaagtc
atcgtctgccccggggacttggtctgggactccccacctatgtcagatgactgtcttcat
caagtctcacaacttgcctgtcatatccccaaagaggacttccctgcccctctgttagaa
gtggccacacagttttactctatgacacctcaaccctcttcactgtctacgtga

>gi568815576f:40964052_41164633|GENSCAN_predicted_peptide_2|128_aa
MLTFYQTSSFKVMGYKHFLTARVQAEHVPVARESPAGFESWCMQQEALGYTGTPTHHGEE
QPLTMPTCLVSPVIYGPVGPSCWPWTQQLLKVKQALCEGCKSQDGPSAVVPSWGQGGDHV
ASLKTNAS

>gi568815576f:40964052_41164633|GENSCAN_predicted_CDS_2|387_bp
atgctaacattctatcagaccagcagcttcaaagtgatgggctataagcacttccttact
gcccgtgttcaggctgagcatgttcctgtggccagagaaagccctgcaggattcgagtcc
tggtgcatgcagcaggaagccttggggtacacaggaacacccacccaccatggcgaggag
cagccgctgactatgccgacctgtttagtgtcgccagtgatttatggcccagtggggccc
agctgttggccgtggacacagcagctgctcaaggttaagcaggccctgtgtgagggatgc
aagtcacaggatggacccagtgcagttgttccctcttggggtcaagggggcgatcatgtt
gccagtctgaaaaccaacgcaagctaa

>gi568815576f:40964052_41164633|GENSCAN_predicted_peptide_3|194_aa
MPVARSWVCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAAREL
LTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLA
KSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKK
GQGGAGAGDHKEED

>gi568815576f:40964052_41164633|GENSCAN_predicted_CDS_3|585_bp
atgccagtggcccggagctgggtttgtcgcaaaacttacgtgaccccgcggagatccttt
gagaaatctcgtctcgaccaagagctgaagctgatcgaagagtatgggctccggaataaa
cgtgaggtctggagggtcaaatttaccctggccaagatccgcaaggccgcccgggaactg
ctgacgcttgatcagaaggacccacggcgtctgttcgaaggcaatgccctgctgtggcgg
ctggtctgcattggggtgctggatgagggcaagatgaagctggattacatcctgggcctg
aagatagaggatttcttagagagacgcctacagacccaggtcttcaagctgggcttggcc
aagtccatccaccacgctcgcgtgctgatccgccagcgccatttcagggtccgcaagcag
gtggtgaacatcccgtccttcattgtccgcctggattcccagaagcacatcgacttctct
ctgtgctctccctatgggggtggccgcccgggccgcgtgaagaggaagaatgccaagaag
ggccagggtggggctggggctggagaccacaaggaggaggattaa

>gi568815576f:40964052_41164633|GENSCAN_predicted_peptide_4|278_aa
MDDDIAALVVDNSSGMCKAGFAGDDVPWAIFPSIVGCTRHQVMMLHVAPEEHPVLLTEAP
LNPKANCEKMTQIMFETFNTPAMYVAIQAMLSLYASVRTAHVQGLHTTAEREIVRDIKKL
CYVALDFEREMAMVASSSSLEKSYKLLDGQVITIGNERFHCPEALFQPSFLGMESCGIHK
TTFNYIMKCDVDICKDLYTNTVLSGGTTMYPGITNRMQKKITALAPSMMKIKIIAPPERK
YSVWISGSILASLSTFQQMWISKQKYDQSGPSIVHECF

>gi568815576f:40964052_41164633|GENSCAN_predicted_CDS_4|837_bp
atggatgatgatattgctgcgctcgttgttgacaacagctctggcatgtgcaaggccggc
ttcgcgggtgacgatgtcccctgggccatcttcccttccatcgtggggtgcaccaggcac
caggtcatgatgctgcatgtggctcccgaggagcaccctgtgctgctgaccgaggccccc
ctgaaccccaaagccaactgtgagaagatgacccagatcatgtttgagaccttcaacacc
ccagccatgtatgtggccatccaggccatgctgtccctgtacgcctccgtccgtaccgcc
catgtacaagggcttcacaccacggccgagcgggaaatcgtgcgtgacatcaagaagctg
tgctacgtcgccctggacttcgagcgggagatggccatggtggcctccagctcctccctg
gagaagagctacaagctgctcgatggccaggtcatcaccatcggcaacgagcggttccac
tgccccgaggcgctcttccagccttccttcctgggcatggaatcctgtggcatccacaaa
actaccttcaactacatcatgaagtgtgacgtggacatctgcaaagacctgtacaccaac
acagtgctgtctggcggcaccaccatgtaccctggcatcaccaacaggatgcagaagaag
atcaccgccctagcacccagcatgatgaagatcaagatcattgctcctcccgagcgcaag
tactccgtgtggatcagcggctccatcctggcctcgctgtctaccttccagcagatgtgg
atcagcaagcagaagtatgaccagtccggcccctccatcgtccacgaatgcttctag

>gi568815576f:40964052_41164633|GENSCAN_predicted_peptide_5|1075_aa
MAENVVEPGPPSAKRPKLSSPALSASASDGTDFGSLFDLEHDLPDELINSTELGLTNGGD
INQLQTSLGMVQDAASKHKQLSELLRSGSSPNLNMGVGGPGQVMASQAQQSSPGLGLINS
MVKSPMTQAGLTSPNMGMGTSGPNQGPTQSTGMMNSPVNQPAMGMNTGMNAGMNPGMLAA
GNGQGIMPNQVMNGSIGAGRGRQNMQYPNPGMGSAGNLLTEPLQQGSPQMGGQTGLRGPQ
PLKMGMMNNPNPYGSPYTQNPGQQIGASGLGLQIQTKTVLSNNLSPFAMDKKAVPGGGMP
NMGQQPAPQVQQPGLVTPVAQGMGSGAHTADPEKRKLIQQQLVLLLHAHKCQRREQANGE
VRQCNLPHCRTMKNVLNHMTHCQSGKSCQAILTGAPVGLGNPSSLGVGQQSAPNLSTVSQ
IDPSSIERAYAALGLPYQVNQMPTQPQVQAKNQQNQQPGQSPQGMRPMSNMSASPMGVNG
GVGVQTPSLLSDSMLHSAINSQNPMMSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQD
LRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIY
KIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTSSLNQFGQMSMAQPP
IVPRQTPPLQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAP
SSGQAPVSQLSQPAVSIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPA
DTQPEDISESKVEDCKMESTETEERSTELKTEIKEEEDQPSTSATQSSPAPGQSKKKIFK
PEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQ
YQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQSLGYCCGRKLVL
KASVLFNKWFLLQLEFSPQTLCCYGKQLCTIPRDATYYSYQNRYHFCEKCFNEIQGESVS
LGDDPSQPQTTINKEQFSKRKNDTLDPELFVECTECGRKMHQICVLHHEIIWPAG

>gi568815576f:40964052_41164633|GENSCAN_predicted_CDS_5|3225_bp
atggccgagaatgtggtggaaccggggccgccttcagccaagcggcctaaactctcatct
ccggccctctcggcgtccgccagcgatggcacagattttggctctctatttgacttggag
cacgacttaccagatgaattaatcaactctacagaattgggactaaccaatggtggtgat
attaatcagcttcagacaagtcttggcatggtacaagatgcagcttctaaacataaacag
ctgtcagaattgctgcgatctggtagttcccctaacctcaatatgggagttggtggccca
ggtcaagtcatggccagccaggcccaacagagcagtcctggattaggtttgataaatagc
atggtcaaaagcccaatgacacaggcaggcttgacttctcccaacatggggatgggcact
agtggaccaaatcagggtcctacgcagtcaacaggtatgatgaacagtccagtaaatcag
cctgccatgggaatgaacacagggatgaatgcgggcatgaatcctggaatgttggctgca
ggcaatggacaagggataatgcctaatcaagtcatgaacggttcaattggagcaggccga
gggcgacagaatatgcagtacccaaacccaggcatgggaagtgctggcaacttactgact
gagcctcttcagcagggctctccccagatgggaggacaaacaggattgagaggcccccag
cctcttaagatgggaatgatgaacaaccccaatccttatggttcaccatatactcagaat
cctggacagcagattggagccagtggccttggtctccagattcagacaaaaactgtacta
tcaaataacttatctccatttgctatggacaaaaaggcagttcctggtggaggaatgccc
aacatgggtcaacagccagccccgcaggtccagcagccaggcctggtgactccagttgcc
caagggatgggttctggagcacatacagctgatccagagaagcgcaagctcatccagcag
cagcttgttctccttttgcatgctcacaagtgccagcgccgggaacaggccaatggggaa
gtgaggcagtgcaaccttccccactgtcgcacaatgaagaatgtcctaaaccacatgaca
cactgccagtcaggcaagtcttgccaagcaattttgactggagcacccgttggacttgga
aatcctagctctctaggggtgggtcaacagtctgcccccaacctaagcactgttagtcag
attgatcccagctccatagaaagagcctatgcagctcttggactaccctatcaagtaaat
cagatgccgacacaaccccaggtgcaagcaaagaaccagcagaatcagcagcctgggcag
tctccccaaggcatgcggcccatgagcaacatgagtgctagtcctatgggagtaaatgga
ggtgtaggagttcaaacgccgagtcttctttctgactcaatgttgcattcagccataaat
tctcaaaacccaatgatgagtgaaaatgccagtgtgccctccctgggtcctatgccaaca
gcagctcaaccatccactactggaattcggaaacagtggcacgaagatattactcaggat
cttcgaaatcatcttgttcacaaactcgtccaagccatatttcctacgccggatcctgct
gctttaaaagacagacggatggaaaacctagttgcatatgctcggaaagttgaaggggac
atgtatgaatctgcaaacaatcgagcggaatactaccaccttctagctgagaaaatctat
aagatccagaaagaactagaagaaaaacgaaggaccagactacagaagcagaacatgcta
ccaaatgctgcaggcatggttccagtttccatgaatccagggcctaacatgggacagccg
caaccaggaatgacttctagtttgaatcaatttggccagatgagcatggcccagccccct
attgtaccccggcaaacccctcctcttcagcaccatggacagttggctcaacctggagct
ctcaacccgcctatgggctatgggcctcgtatgcaacagccttccaaccagggccagttc
cttcctcagactcagttcccatcacagggaatgaatgtaacaaatatccctttggctccg
tccagcggtcaagctccagtgtctcaactttcccagccagctgtaagcattgaaggacag
gtatcaaatcctccatctactagtagcacagaagtgaattctcaggccattgctgagaag
cagccttcccaggaagtgaagatggaggccaaaatggaagtggatcaaccagaaccagca
gatactcagccggaggatatttcagagtctaaagtggaagactgtaaaatggaatctacc
gaaacagaagagagaagcactgagttaaaaactgaaataaaagaggaggaagaccagcca
agtacttcagctacccagtcatctccggctccaggacagtcaaagaaaaagattttcaaa
ccagaagaactacgacaggcactgatgccaactttggaggcactttaccgtcaggatcca
gaatcccttccctttcgtcaacctgtggaccctcagcttttaggaatccctgattacttt
gatattgtgaagagccccatggatctttctaccattaagaggaagttagacactggacag
tatcaggagccctggcagtatgtcgatgatatttggcttatgttcaataatgcctggtta
tataaccggaaaacatcacgggtatacaaatactgctccaagctctctgaggtctttgaa
caagaaattgacccagtgatgcaaagccttggatactgttgtggcagaaagcttgtcctt
aaggcctctgtgctttttaacaaatggtttcttttgcagttggagttctctccacagaca
ctgtgttgctacggcaaacagttgtgcacaatacctcgtgatgccacttattacagttac
cagaacaggtatcatttctgtgagaagtgtttcaatgagatccaaggggagagcgtttct
ttgggggatgacccttcccagcctcaaactacaataaataaagaacaattttccaagaga
aaaaatgacacactggatcctgaactgtttgttgaatgtacagagtgcggaagaaagatg
catcagatctgtgtccttcaccatgagatcatctggcctgctggn