GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:23:51

Sequence gi568815585r:21528435_21729015 : 200581 bp : 40.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1239   1269   31  2  1   66  103    24 0.441   1.66
 1.02 Term +   2346   2551  206  1  2   40   38   194 0.536   6.15
 1.03 PlyA +   2755   2760    6                               1.05

 2.00 Prom +   4641   4680   40                              -5.75
 2.01 Init +  26491  27413  923  0  2   70   42   223 0.430   9.38
 2.02 Intr +  36022  36177  156  1  0   32   77   127 0.701   4.20
 2.03 Term +  37754  37880  127  2  1  110   55    52 0.676   0.87
 2.04 PlyA +  37895  37900    6                               1.05

 3.00 Prom +  62609  62648   40                              -4.75
 3.01 Sngl +  65533  65868  336  0  0   81   44   159 0.716   6.58
 3.02 PlyA +  66218  66223    6                               1.05

 4.03 PlyA -  66617  66612    6                               1.05
 4.02 Term -  75443  75225  219  2  0   73   28   198 0.984   8.36
 4.01 Init -  75714  75505  210  0  0  107   92   238 0.999  22.93
 4.00 Prom -  79840  79801   40                              -4.95

 5.04 PlyA -  79953  79948    6                               1.05
 5.03 Term -  82606  82449  158  2  2   53   54   129 0.788   3.11
 5.02 Intr -  83177  83049  129  0  0   56  101   174 0.156  15.25
 5.01 Init -  91859  91793   67  2  1   86   85    61 0.146   6.89
 5.00 Prom -  94500  94461   40                              -6.35

 6.02 PlyA -  94877  94872    6                               1.05
 6.01 Sngl - 100581  99979  603  0  0   53   42   764 0.998  64.24
 6.00 Prom - 102055 102016   40                              -3.65

 7.04 PlyA - 102655 102650    6                               1.05
 7.03 Term - 109322 109090  233  0  2   68   45   127 0.026   2.05
 7.02 Intr - 114081 113759  323  2  2   41   91   114 0.005   1.58
 7.01 Init - 135589 135471  119  1  2   67   28   142 0.520   5.82
 7.00 Prom - 135862 135823   40                              -5.05

 8.03 PlyA - 137610 137605    6                               1.05
 8.02 Term - 141144 140405  740  1  2  -49   37   514 0.852  25.23
 8.01 Init - 142220 142163   58  2  1   81  110   -10 0.772   2.02
 8.00 Prom - 142882 142843   40                             -14.71

 9.00 Prom + 143064 143103   40                              -6.35
 9.01 Init + 143479 143755  277  0  1   39   74   270 0.969  17.89
 9.02 Term + 144858 145066  209  1  2   60   42   220 0.881  11.12
 9.03 PlyA + 147719 147724    6                               1.05

10.00 Prom + 148091 148130   40                              -6.35
10.01 Init + 148162 148198   37  0  1   55   80    77 0.017   4.14
10.02 Intr + 152608 152711  104  2  2  100   89   115 0.096  11.77
10.03 Intr + 161544 161603   60  2  0  104   61    35 0.030   0.41
10.04 Intr + 163112 163273  162  1  0   85  -22   158 0.015   3.75
10.05 Intr + 172756 172962  207  0  0  136   16   118 0.022   7.75
10.06 Intr + 192153 192300  148  2  1   65   19   112 0.222   0.89
10.07 Term + 194118 194248  131  1  2   79   47   106 0.628   2.96
10.08 PlyA + 194991 194996    6                              -0.45

11.03 PlyA - 195677 195672    6                               1.05
11.02 Term - 197762 197465  298  1  1   31   45   382 0.731  21.95
11.01 Init - 198486 198374  113  0  2   43  105    85 0.912   5.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  83331  83049  283  0  1   39  101   248 0.834  18.45
S.002 Term + 172756 173001  246  0  0  136   48   138 0.913   9.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_1|78_aa
MISGTVSEVSSAAPGRDGGRGQASRGAPMDDGFLSLDSPSYVLYSDRAEWADIDLVLQNV
GPNPVVQIIYSDKYTLWK

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_1|237_bp
atgatctcaggcactgtgtcagaagtttcatcagcagcaccaggaagagatggcggccga
ggccaggcaagccgtggtgcccccatggacgacgggtttctgagcctggactcaccctcc
tacgtcctgtacagcgacagagcagaatgggctgatatagatctagtgctgcagaatgtt
ggccccaatcctgtggtccagatcatttacagtgacaaatatacactctggaaatga

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_2|401_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEAIINILPTKKSPGPDGFTAEFYQRYKEKL
IPFLLKLFQSIEKEGILPNLFYEASIILIPKPGRDTTKKENFRPISLMNTDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRTKDKNHMIISIDAEKAFDKI
QQCFMLKTLNKLGIDGMYLKIIIAIYDKPTANIILNGQKLEAFPLKINRLILTSELITSS
GDFNKVTGNHIVFLNPSTLSLFYKAISVNLNTFPPSSLSADNLASQFTEKKRKKGNKQLD
QLPLDVMWGLLYGCGGEVKREVRIVQSYDQLSVFQSDCVTVKGCTLQKRFSVFLFFHSPC
CCIFIESIPVHLGRRQKANKFSQTTSSIWAQRMGSNPLYAK

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_2|1206_bp
atggataaattcctcgacacatatactctcccaagactaaatcaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatatcttaccaaccaaa
aaaagtccaggaccagatggattcacagctgaattctaccagaggtacaaggagaagctg
ataccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactta
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagag
aattttagaccaatatccttgatgaacactgatgcaaaaatcctcaataaaatactggca
aaccgaatacagcaacacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatacgaaaatcaataaacgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaatgcttcatgctaaaaactctcaataaattaggtattgatgggatgtatctcaaa
ataataatagctatctatgacaaacccacagccaatatcatactgaatggacaaaaactg
gaagcattccctttgaaaataaatagacttattttaacttcagaattaataacttcaagt
ggggactttaataaggttactggcaatcatattgtatttctcaatccatcaactctctca
ctgttttataaggctatttctgtaaacctcaataccttccccccctcttcactctcagct
gataacctggcttcccaattcactgagaaaaaaagaaagaaaggtaataaacaacttgac
cagcttccattagatgtcatgtggggcctgctctatggatgtggtggtgaggtgaaaagg
gaggtacgtattgtacagtcctatgatcagctgtcagtctttcagtcggactgtgtgact
gtgaagggatgtacccttcaaaagcggttctcagtttttttgtttttccactccccttgc
tgctgcatatttatagagagtattccagtacacttaggaaggcgtcagaaagccaacaag
ttttcacagactacttcttcaatatgggcacagaggatggggtcaaatccactctatgca
aaatga

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_3|111_aa
MGKDFMTKMPKVIATKAKIDKWDLIKVKSFCTAKETIIRVNRQLTEWEKIFAIYPSDKGL
IYRIYKKLKHIYKKKRNNPTKKWAKDMNRHFSKEDIYTANKHEKELIITGH

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_3|336_bp
atgggcaaagacttcatgacaaaaatgccaaaagtaattgcaacaaaagccaaaattgac
aaatgggatctaattaaagtaaagagcttctgcacagcaaaggaaactatcatcagggtg
aacaggcaacttacagaatgggagaaaatttttgcaatctacccatctgacaaaggtcta
atatacagaatttacaagaaacttaaacatatttataagaaaaaaagaaacaaccccacc
aaaaagtgggcaaaggatatgaacagacatttctcaaaagaagacatttacacggccaac
aaacatgaaaaagagctcatcatcactggtcattag

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_4|142_aa
MAAAAGSCARVAAWGGKLRRGLAVSRQAVRSPGPLAAAVAGAALAGAGAAWHHSRVSVAA
RDGSFTVSAQAGSGLALGGSPGAVGGGAAADRSALRLVGLAPSWTGPRPESPRAFEAGDR
RFCLPWENPADAEHHGPQNWPH

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_4|429_bp
atggcggcggctgcgggtagctgcgcgcgggtggcggcctggggcggaaaactgcgacgg
gggctcgctgtcagccgacaggctgtgcggagtcccggccccttggcagcggcagtggcc
ggcgcggccctggcaggagcaggagcggcctggcaccacagccgcgtcagtgttgcggcg
cgggatggcagttttacagtctccgcacaggcggggagtggtttggctctgggcggctct
cccggagccgtgggtggaggtgccgctgcggatcggagcgccctgcgactggtgggactc
gctccttcctggaccggcccccggcctgagtccccgagggccttcgaggctggtgaccgg
agattctgcctcccttgggagaaccccgcggacgctgaacaccacggcccacaaaactgg
ccgcactaa

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_5|117_aa
MQLRPGKRQRGPVTCRAGKRQGGPYVRAGRTAHAQHRSDCLLTQRATVSGIGGLSDFKNE
ATDPRARCKSSPSPHRTQKPGRLHLSRPRHLGLHLLDPLAGLLQGPVHTLGVWVLPH

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_5|354_bp
atgcagcttaggccaggcaagcgccagcgagggccagtaacctgcagagctggcaagagg
cagggaggcccctatgtgagagcaggtcggaccgcccacgcgcagcaccgcagcgactgc
ctcctcacccagcgtgcgactgtgtccggaattggtgggttgtctgacttcaagaatgaa
gccacagaccctcgcgctagatgtaaaagttctccaagtcctcaccggacccagaagcct
ggaaggcttcacctctcacgaccccggcacctggggctgcacctgctcgacccactggcc
ggcctgctccagggcccagtgcacactcttggggtctgggtgcttcctcattga

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_6|200_aa
MFSSSAKIVKPNDEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIELGGGRKAI
IIFVPIPQLKSFQKIQVRLVRELEKKFSGKHVVFIVQRRILPKPTRKSRTKNKQKRPRSH
TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL
TGKDVNFEFPEFQLQTKMTT

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_6|603_bp
atgttcagttcgagcgccaagatcgtgaagcccaatgatgagaagccggacgagttcgag
tccggcatctcccaggctcttctggagctggagatgaactcggacctcaaagctcagctc
agggagctgaatattacggcagccaaggaaattgaacttggtggtggtcggaaagctatc
ataatctttgttcccattcctcaactgaaatctttccagaaaattcaagtccggctagta
cgcgaattggagaaaaagttcagtgggaagcatgtcgtctttatcgttcagagaagaatt
ctgcctaagccaactcgaaaaagccgtacaaaaaataagcaaaagcgtcccaggagccat
actctgacagctgtgcacgatgccatccttgaggacttggtcttcccaagcgaaattgtg
ggcaagagaatccgcgtgaaactagatggcagccggctcataaaggttcatttggacaaa
gcacagcagaacaatgtggaacacaaggttgaaactttttctggtgtctataagaagctc
acgggcaaggatgttaattttgaattcccagagtttcaattacaaacaaaaatgactaca
taa

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_7|224_aa
METKGKNLKEVVEIKMTIAEMKNAFDEIVSKLDTAEKVISNWHVVLTVLWLPGVTILLMC
LRFSGDQKLHLMPSLHLGTPKLRISFILWIESVWDKKVYEAHWIFFYFSKGKDSVELLKL
RNLLLNPKITCKRDFLCYPTSDLGISAVYSGCLITRCCTNKSHFHIQIWFAESSSQDSHI
GSNAHKGAAMQRGTVAEVPGSSALQTGDCRGERTERPWRPNFRG

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_7|675_bp
atggaaactaaagggaagaatctaaaagaagtggtagaaatcaaaatgactatagcagaa
atgaagaatgcctttgatgagattgtcagtaaactggacacagctgaaaaagtgattagt
aattggcacgtcgtcctcacagtcctgtggctgccaggggtcaccattctgctcatgtgc
ttgaggttttctggggaccaaaaactgcacctaatgccatcacttcaccttggtacccct
aaattacggatcagtttcattctatggattgagtcagtgtgggacaagaaggtttatgaa
gcccattggatttttttctatttctccaaaggaaaggattcagttgagcttttgaagttg
aggaatttgcttcttaacccaaagatcacgtgcaaacgtgacttcctgtgctaccctact
tctgatttaggaatcagcgcagtatacagtgggtgcttaataactaggtgttgcacaaat
aaatcccatttccacatccaaatttggtttgctgaaagcagcagccaagacagccacata
ggtagtaacgcgcacaagggagcggcaatgcaaagaggaactgtggctgaggtgcccgga
agctccgctttgcaaaccggggactgcaggggagagaggacggaaaggccgtggcggccg
aacttccgaggctga

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_8|265_aa
MAVSLPFFGHTHRSANYVSGLRLKTKGSDEFADFGGAGGASDLERPSPALRGGRRAPARA
RRKERRASGPPLFLSHPPFAAVQGHWVSGAGSVRLAYVFLKHESPAPWYLQQSHPRWYRA
GFNVNCSAADTRSWVLSVTSHKPPESLALISEAASSDGYSRGVPRPVGYSAPGWLLSGEK
SDGRNRDRPRETGRRFIRRETSSTWTLDISSEDKTGTISTSCLQPHSFDLNLDCHPMSKD
HFRFRILQRVTVALKSVAAVEERAK

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_8|798_bp
atggcagtttctcttccattcttcggccacacacacagaagcgcaaactatgtttcaggg
cttcgcctgaagacgaaagggagcgatgaatttgcagatttcgggggcgctggaggtgcc
agcgacctggagcgaccttcccctgccctccggggaggaaggcgtgctccggcccgggcg
aggaggaaggagagaagagcgagtggtcctcccctcttcctttcccaccccccctttgcc
gcagtccagggtcattgggtgtccggggctggctcggtgcgtcttgcttacgtgtttctg
aagcatgagagccctgccccgtggtatttacagcagtcacatccgcggtggtacagagcg
ggctttaacgttaactgctcggcggcagatacaagaagctgggtattaagtgtcacttct
cataaaccacccgagtcgctcgcattaatctccgaggcagccagcagtgatgggtacagc
aggggcgttcctcgaccagttgggtacagtgcgccgggatggttacttagtggggaaaaa
agcgatggaagaaacagagacaggcccagagagacagggagacgcttcataagaagagaa
acgagcagcacgtggacattggacatttccagtgaagacaagactgggaccatttccacc
agctgtctccaaccacattctttcgatctgaatttagattgtcatccaatgagcaaagac
catttccgcttccgaatcctgcagcgtgtgactgtcgctttaaaaagcgttgcagcagtg
gaagagagggcgaagtag

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_9|161_aa
MAPLGEVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGI
LRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFVPDVEHNLNCMFSFVRLRMMPEGEEDLG
LGWGWSQIHEAQDLLLMLTPEPKPTAEPSSVKLLRPSPLAA

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_9|486_bp
atggctcccttaggtgaagttgggaactatttcggtgtgcaggatgcggtaccgtttggg
aatgtgcccgtgttgccggtggacagcccggttttgttaagtgaccacctgggtcagtcc
gaagcaggggggctccccaggggacccgcagtcacggacttggatcatttaaaggggatt
ctcaggcggaggcagctatactgcaggactggatttcacttagaaatcttccccaatggt
actatccagggaaccaggaaagaccacagccgatttgtgccagatgttgaacacaatcta
aactgtatgtttagcttcgtgcggctgcggatgatgccagaaggtgaggaggacttaggc
ctgggctggggatggtcccagatccacgaggcccaggatttgctcctcatgctcacccct
gagcctaagcccacagctgagcctagtagtgtgaaattgctccggccgtctccactcgct
gcttaa

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_10|282_aa
MVDLAALVRASLGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSNGLFIAWNPGEPL
NQSLSVMLLPEASLLTCGESSPVSISSPSGAVVQRPGPRDALHPYKVEWEPLSWASFGSG
LEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTH
FLPRPVDPDKLGSPKSSELDSPPRLMAPIHPSQRCQESTELQLHTSGACCVLEWSRFQNV
RTLKIYALSKFQENDPMLLATGTVQQQSCRTEAPRKLKLCTL

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_10|849_bp
atggttgatctggcagccctggttcgagcttctctgggcattctggaatttatcagtata
gcagtgggcctggtcagcattcgaggcgtggacagtggactctacctcgggatgaatgag
aagggggagctgtatggatcaaatggattgttcattgcatggaaccctggagaacccctc
aaccagagcctcagtgtcatgttgctgccagaggcatctttgctgacatgtggagagtcc
tcccctgtcagcatcagcagcccctccggggctgtcgttcagcgtcctggcccgagagat
gccctccatccttacaaagtggagtgggaaccactgtcctgggccagctttggcagtggc
ctggaaaaactaacccaagagtgtgtattcagagaacagttcgaagaaaactggtataat
acgtactcatcaaacctatataagcacgtggacactggaaggcgatactatgttgcatta
aataaagatgggaccccgagagaagggactaggactaaacggcaccagaaattcacacat
tttttacctagaccagtggaccccgacaaattaggctcccccaagtcatctgagctggac
tccccgcctaggctcatggcccccatccatccttcacagagatgccaggagagtacagag
ctgcaacttcatacctctggggcctgctgtgttttggaatggtccagatttcagaatgtg
agaacacttaagatctacgctctcagcaaatttcaagaaaacgatccaatgttgttagct
acaggcaccgtacaacagcagagctgcagaactgaggcacctcgcaaactcaaactttgc
accctttga

>gi568815585r:21528435_21729015|GENSCAN_predicted_peptide_11|136_aa
MGSPLLETSAEDTESRSPSRSRSGNTSEQSTLTVEPERCSISAAGDSDGSGSIGSGSGCD
DGGGGSDGASDGGGDGGGDGDGDGDGSGDGGDGGGGGGDGGGGGGDGGDGDGADGADGGD
GDGGDGDGDGWWWWWW

>gi568815585r:21528435_21729015|GENSCAN_predicted_CDS_11|411_bp
atgggatcccctctcttggaaacctctgcagaagacacagagagcaggagtccttccagg
agcaggagtggaaacaccagcgagcagtcaacactcacagtagagcctgagaggtgctca
ataagtgctgctggtgatagtgatggtagtggtagtattggtagtggtagtggttgtgat
gatggtggcggtggtagtgatggtgctagtgatggtggtggtgatggtggtggtgatggt
gatggtgatggtgatggtagtggtgatggtggtgatggtggtggtggtggtggtgatggt
ggtggtggtggtggtgatggtggtgatggtgatggtgctgatggtgctgatggtggtgat
ggtgatggtggtgatggtgatggtgatggttggtggtggtggtggtggtga