GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:23:49

Sequence gi568815581r:46621585_46822167 : 200583 bp : 43.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2660   2745   86  1  2   76   81    39 0.255   0.62
 1.02 Intr +   5029   5128  100  1  1   81   93    22 0.600   2.11
 1.03 Intr +   8827   8866   40  0  1  124  100   -21 0.761   0.50
 1.04 Intr +  15792  15958  167  1  2   99   68   239 0.860  22.68
 1.05 Intr +  18470  18577  108  1  0   79   65   108 0.996   8.08
 1.06 Intr +  19059  19134   76  2  1   84   91    43 0.999   3.29
 1.07 Intr +  21520  21675  156  2  0   33  106   152 0.993  11.48
 1.08 Intr +  52830  53029  200  1  2  126   57   188 0.495  18.57
 1.09 Intr +  71319  71484  166  2  1   86   76   255 0.992  23.63
 1.10 Intr +  72263  72337   75  0  0   63   82    41 0.583   0.49
 1.11 Intr +  72891  73078  188  1  2   37   77   139 0.702   7.11
 1.12 Intr +  83175  83270   96  2  0   80   81   101 0.921   8.81
 1.13 Intr +  89379  89535  157  2  1   82  100   223 0.997  22.48
 1.14 Intr +  92269  92402  134  2  2   96   64   142 0.852  12.96
 1.15 Intr +  93695  93740   46  1  1   86   63   -16 0.685  -6.32
 1.16 Term +  96189  96496  308  1  2   -6   45   372 0.580  18.78
 1.17 PlyA +  98870  98875    6                               1.05

 2.02 PlyA -  99984  99979    6                               1.05
 2.01 Sngl - 100549  99998  552  1  0   68   41   521 0.997  39.52
 2.00 Prom - 106277 106238   40                              -6.26

 3.00 Prom + 109206 109245   40                              -6.06
 3.01 Init + 109301 109377   77  1  2   70   99    55 0.292   5.36
 3.02 Intr + 117073 117107   35  1  2  105   89    15 0.169   1.17
 3.03 Intr + 120839 120930   92  0  2   32   92    53 0.178  -0.19
 3.04 Intr + 128189 128323  135  1  0   58   83   206 0.984  17.86
 3.05 Intr + 129919 130032  114  0  0   71  110   118 0.998  12.94
 3.06 Term + 132108 132251  144  2  0  110   38    61 0.944   1.21
 3.07 PlyA + 132408 132413    6                               1.05

 4.12 PlyA - 133892 133887    6                               1.05
 4.11 Term - 147215 146736  480  2  0   92   49   758 0.993  67.10
 4.10 Intr - 148464 148199  266  1  2   94  101   408 0.999  39.93
 4.09 Intr - 152325 152084  242  2  2  115   79   394 0.875  38.39
 4.08 Intr - 160911 160833   79  1  1  127   49    27 0.001   1.31
 4.07 Intr - 179677 179630   48  2  0   68   94    30 0.032   0.25
 4.06 Intr - 183519 183471   49  0  1   47  101    44 0.082  -0.15
 4.05 Intr - 194355 194301   55  2  1  103   51    74 0.410   4.18
 4.04 Intr - 197221 196934  288  0  0   74   83   111 0.335   5.56
 4.03 Intr - 198419 198337   83  2  2  106   37    49 0.191   0.04
 4.02 Intr - 198727 198580  148  0  1  110   47    74 0.277   5.74
 4.01 Intr - 199629 199524  106  1  1   79   86    22 0.567   0.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:46621585_46822167|GENSCAN_predicted_peptide_1|700_aa
SMQAARCPTDELSLTNCAVVNEKDFQSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL
PQRKWAGLSIGQEIEVSLYTFDKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQ
FNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVA
FEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEI
VEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRK
LFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQL
NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADV
DIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASL
ENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGP
PHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKENLNRITGTSDFPRVGK
ELEQCQRQANKVTEITLNNFDKVLEHDGKLTELEQRSDQLLDMSSAFSKTTKTLAQKKCW
ENIHCQIYLGLVVGGSLLIILIEQLAIFLPQSDTSNAPQT

>gi568815581r:46621585_46822167|GENSCAN_predicted_CDS_1|2103_bp
agcatgcaagcggcaagatgtcctacagatgaattatctttaaccaattgtgcagttgtg
aatgaaaaggatttccagtctggccagcatgtgattgtgaggacctctcccaatcacagg
tacacatttacactgaagacacatccatcggtggttccagggagcattgcattcagttta
cctcagagaaaatgggctgggctttctattgggcaagaaatagaagtctccttatataca
tttgacaaagccaaacagtgtattggcacaatgaccatcgagattgatttcctgcagaaa
aaaagcattgactccaacccttatgacaccgacaagatggcagcagaatttattcagcaa
ttcaacaaccaggccttctcagtgggacaacagcttgtctttagcttcaatgaaaagctt
tttggcttactggtgaaggacattgaagccatggatcctagcatcctgaagggagagcct
gcgacagggaaaaggcagaagattgaagtaggactggttgttggaaacagtcaagttgca
tttgaaaaagcagaaaattcgtcacttaatcttattggcaaagctaaaaccaaggaaaat
cgccaatcaattatcaatcctgactggaactttgaaaaaatgggaataggaggtctagac
aaggaattttcagatattttccgacgagcatttgcttcccgagtatttcctccagagatt
gtggagcagatgggttgtaaacatgttaaaggcatcctgttatatggacccccaggttgt
ggtaagactctcttggctcgacagattggcaagatgttgaatgcaagagagcccaaagtg
gtcaatgggccagaaatccttaacaaatatgtgggagaatcagaggctaacattcgcaaa
ctttttgctgatgctgaagaggagcaaaggaggcttggtgctaacagtggtttgcacatc
atcatctttgatgaaattgatgccatctgcaagcagagagggagcatggctggtagcacg
ggagttcatgacactgttgtcaaccagttgctgtccaaaattgatggcgtggagcagcta
aacaacatcctagtcattggaatgaccaatagaccagatctgatagatgaggctcttctt
agacctggaagactggaagttaaaatggagataggcttgccagatgagaaaggccgacta
cagattcttcacatccacacagcaagaatgagagggcatcagttactctctgctgatgta
gacattaaagaactggccgtggagaccaagaatttcagtggtgctgaattggagggtctg
gtgcgagcagcccagtccactgctatgaatagacacataaaggccagtactaaagtggaa
gtggacatggagaaagcagaaagcctgcaagtgacgagaggagacttccttgcttctttg
gagaatgatatcaaaccagcctttggcacaaaccaagaagattatgcaagttacattatg
aacggtatcatcaaatggggtgacccagttactcgagttctagatgatggggagctgctg
gtgcagcagactaagaacagtgaccgcacaccattggtcagcgtgcttctggaaggccct
cctcacagtgggaagactgctttagctgcaaaaattgcagaggaatccaacttcccgttc
atcaagatctgttctcctgataaaatgattggcttttctgaaacagccaaatgtcaggcc
atgaagaaggaaaatctgaatagaataactgggaccagtgatttccctagagtagggaaa
gagttggagcagtgccagcggcaagcgaacaaggtgacggaaatcacgcttaacaacttt
gacaaggtcctggagcatgatggaaagctgaccgaactggagcagcgttcagaccaactc
ctggatatgagctcagccttcagcaagacaacaaagaccctggcccagaagaagtgctgg
gagaacatccattgccagatctacttggggctagtggtgggtggtagcctgctcatcatc
ctgattgagcagctggccatctttctccctcagagtgacaccagtaatgccccacagacc
tag

>gi568815581r:46621585_46822167|GENSCAN_predicted_peptide_2|183_aa
MARSRTSSSPAISQALLELEMNSDLKAQLRELNITAAKETEVGGGRKAIIIFVPVPQLKS
FQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKCPRSRTLTAVHDAFLE
DLVFPSEIVGKRIPVKLDSSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE
FQL

>gi568815581r:46621585_46822167|GENSCAN_predicted_CDS_2|552_bp
atggcgagaagccggacgagttcgagtccggccatctcccaggctcttctggagctggag
atgaactcggacctcaaggctcagctcagggagctgaatattacggcagccaaggaaact
gaagttggtggtggtcggaaagctatcataatctttgttcccgttcctcaactgaaatct
ttccagaaaatccaagtccggctagtacgcgaattggagaaaaagttcagtgggaagcat
gtcgtctttatcgctcagaggagaattctgcctaagccaactcgaaaaagccgtacaaaa
aataagcaaaagtgtcccaggagccgtactctgacagctgtgcacgatgccttccttgag
gacttggtcttcccaagcgaaattgtgggcaagagaatccccgtcaaactagatagcagc
cggctcataaaggttcatttggacaaagcacagcagaacaatgtggaacacaaggttgaa
actttttctggtgtctataagaagctcacgggcaaggatgttaattttgaattcccagag
tttcaattgtaa

>gi568815581r:46621585_46822167|GENSCAN_predicted_peptide_3|198_aa
MAIIKKSGNDKRWCRCGEIGTCMHCCGFAISCYLQNPSSMLALETSVKPNRLKSCPDEGE
LARNTVNIGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKD
KERTTIAQQVKGKKVWIGIKKLLMLIEMSLQVSDQVNASYACGIESESGALRPDLQRLTF
HRPLSLNPFMSNGFRAAE

>gi568815581r:46621585_46822167|GENSCAN_predicted_CDS_3|597_bp
atggctatcatcaaaaagtcaggtaatgacaagcgctggtgcagatgtggagaaattgga
acctgtatgcactgctgtggttttgctatcagctgttacttgcagaatccaagcagtatg
ctagccctggaaacatcagtaaagccaaaccgacttaagtcctgtcctgatgaaggagaa
ctagcaagaaatacagtaaatataggccgcaagcttcttatcattgggaccactagccgc
aaagatgtccttcaggagatggaaatgcttaacgctttcagcaccaccatccacgtgccc
aacattgccacaggagagcagctgttggaagctttggagcttttgggcaacttcaaggat
aaggaacgcaccacaattgcacagcaagtcaaagggaagaaggtctggataggaatcaag
aagttactaatgctgatcgagatgtccctacaggtcagtgatcaagttaatgcttcttat
gcatgtgggatagagagtgagagtggggcactcaggcctgatcttcagcgactgacattt
cataggcctctgagtttgaaccccttcatgtcaaatggatttcgtgcagctgagtga

>gi568815581r:46621585_46822167|GENSCAN_predicted_peptide_4|614_aa
XAHGQLLDSTLQPTCFLPDAHDLRLSSPGCLEEAFSPAMGWERSRSHDKPRRLSRPLVPP
RPFPRAPCAGSSRVRRGLADQKGQQFPTQRSLLPTGSASFTPDRGCAESWCLRPRALIGC
SLTSSNPAAPRWAREGGGCGWRCASDKPESHFQSQVDFVPTIGGVAPPLHGRGQTSSSAP
LLMEPHLLGLLLGLLLGGTRVLAGYPIWWCWAQGCVAVNIFADIYLWWVRGLTDFKNEAT
YLCAWPLPPCTRSSPNPNMEVSVEGGALLGPGTSWASVQYCPGASRSLALGQQYTSLGSQ
PLLCGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCTTIDDSLAIF
GPVLDKATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHKGPPGEGWKWGGCSED
ADFGVLVSREFADARENRPDARSAMNKHNNEAGRTTILDHMHLKCKCHGLSGSCEVKTCW
WAQPDFRAIGDFLKDKYDSASEMVVEKHRESRGWVETLRAKYSLFKPPTERDLVYYENSP
NFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVS
CQECIRIYDVHTCK

>gi568815581r:46621585_46822167|GENSCAN_predicted_CDS_4|1845_bp
ngcgcacatggccagctcctagattccacccttcaacccacttgtttcctgcctgatgca
catgacctgcgtctgagttctccaggctgcctggaggaggcattcagtccagcaatgggc
tgggaacgcagcaggagccatgacaagcccaggcggctctcccgacccttggtgcccccg
aggccatttccccgcgctccctgtgccggcagcagccgcgtgcggagagggctcgccgac
cagaaggggcagcagttccctacacagcggtccctgctccccaccggcagtgcttccttc
accccagaccggggctgcgcagagtcctggtgcctcaggccgcgggcgctgattggctgc
tcgctgacatcctcaaacccggctgctccgcgctgggctcgggaggggggcggctgcggg
tggaggtgcgcttctgacaagcccgaaagtcatttccaatctcaagtggactttgttcca
actattgggggcgtcgctccccctcttcatggtcgcgggcaaacttcctcctcggcgcct
cttctaatggagccccacctgctcgggctgctcctcggcctcctgctcggtggcaccagg
gtcctcgctggctacccaatttggtggtgctgggcccagggctgtgtggctgtgaatatc
tttgcagacatctacctgtggtgggttcgtggtctcactgacttcaagaatgaagccacg
tacctttgcgcctggcccctgccgccctgcacccgctcctctcccaaccccaacatggaa
gtttccgtggagggtggagcccttctgggcccaggaacaagttgggcctctgtccagtac
tgcccaggagccagcaggtccctggccctgggccagcagtacacatctctgggctcacag
cccctgctctgcggctccatcccaggcctggtccccaagcaactgcgcttctgccgcaat
tacatcgagatcatgcccagcgtggccgagggcgtgaagctgggcatccaggagtgccag
caccagttccggggccgccgctggaactgcaccaccatagatgacagcctggccatcttt
gggcccgtcctcgacaaagccacccgcgagtcggccttcgttcacgccatcgcctcggcc
ggcgtggccttcgccgtcacccgctcctgcgccgagggcacctccaccatttgcggctgt
gactcgcatcataaggggccgcctggcgaaggctggaagtggggcggctgcagcgaggac
gctgacttcggcgtgttagtgtccagggagttcgcggatgcgcgcgagaacaggccggac
gcgcgctcggccatgaacaagcacaacaacgaggcgggccgcacgactatcctggaccac
atgcacctcaaatgcaagtgccacgggctgtcgggcagctgtgaggtgaagacctgctgg
tgggcgcagcctgacttccgtgccatcggtgacttcctcaaggacaagtatgacagcgcc
tcggagatggtagtagagaagcaccgtgagtcccgaggctgggtggagaccctccgggcc
aagtactcgctcttcaagccacccacggagagggacctggtctactacgagaactccccc
aacttttgtgagcccaacccagagacgggttcctttggcacaagggaccggacttgcaat
gtcacctcccacggcatcgatggctgcgatctgctctgctgtggccggggccacaacacg
aggacggagaagcggaaggaaaaatgccactgcatcttccactggtgctgctacgtcagc
tgccaggagtgtattcgcatctacgacgtgcacacctgcaagtag