GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:21:15

Sequence gi568815592f:117898975_118099445 : 200471 bp : 38.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8753   8925  173  1  2   91   99   266 0.789  26.96
 1.02 Intr +  17392  17510  119  1  2   28   77   113 0.077   3.39
 1.03 Term +  18857  19071  215  0  2   11   47   184 0.910   3.01
 1.04 PlyA +  20766  20771    6                               1.05

 2.06 PlyA -  21049  21044    6                              -1.95
 2.05 Term -  21274  21053  222  1  0  108   42    89 0.060   2.23
 2.04 Intr -  37348  37170  179  2  2   43   68   141 0.092   6.32
 2.03 Intr -  38240  38161   80  1  2  -16   99    62 0.184  -4.82
 2.02 Intr -  39741  39554  188  0  2   37   80    75 0.218  -0.83
 2.01 Init -  42152  42075   78  2  0  117   92    31 0.729   7.51
 2.00 Prom -  45765  45726   40                              -7.15

 3.00 Prom +  51562  51601   40                              -4.85
 3.01 Sngl +  57010  57564  555  0  0   73   38   242 0.704  13.61
 3.02 PlyA +  59182  59187    6                               1.05

 4.04 PlyA -  60961  60956    6                               1.05
 4.03 Term -  66947  66871   77  0  2   69   37    90 0.742  -0.98
 4.02 Intr -  67439  67314  126  0  0   66   78   167 0.944  13.23
 4.01 Init -  67798  67615  184  1  1   34   89   154 0.939   9.43
 4.00 Prom -  70030  69991   40                              -8.05

 5.02 PlyA -  70198  70193    6                               1.05
 5.01 Sngl -  72875  72393  483  2  0   76   48   286 0.613  18.62
 5.00 Prom -  73549  73510   40                              -5.15

 6.00 Prom +  73674  73713   40                              -5.45
 6.01 Init +  81307  81326   20  0  2   68   73    19 0.415  -2.02
 6.02 Intr +  87829  87960  132  1  0   67  110    99 0.959   8.84
 6.03 Intr +  88153  88294  142  1  1  117  101    31 0.968   6.73
 6.04 Intr +  95462  95576  115  1  1   24   79   100 0.044   1.80
 6.05 Term +  97778  98172  395  0  2  -30   44   367 0.027  14.71
 6.06 PlyA +  98256  98261    6                               1.05

 7.00 Prom +  99256  99295   40                              -6.15
 7.01 Init + 100001 100442  442  1  1  110   75   500 0.982  47.17
 7.02 Term + 100812 101380  569  1  2   46   38   250 0.879   9.39
 7.03 PlyA + 101446 101451    6                               1.05

 8.04 PlyA - 103188 103183    6                               1.05
 8.03 Term - 106144 106076   69  1  0  123   50     2 0.069  -3.14
 8.02 Intr - 112402 112358   45  1  0   92   87    59 0.389   3.89
 8.01 Init - 112786 112724   63  1  0   75   92    28 0.288   3.26
 8.00 Prom - 117655 117616   40                              -3.15

 9.07 PlyA - 119041 119036    6                               1.05
 9.06 Term - 123606 123430  177  0  0  137   46    56 0.328   3.00
 9.05 Intr - 143916 143656  261  0  0   93   92    29 0.029   0.56
 9.04 Intr - 156694 156647   48  1  0  103   50    50 0.010   0.66
 9.03 Intr - 181202 181160   43  1  1  114   82    21 0.016   1.42
 9.02 Intr - 188553 188468   86  0  2   89   94    62 0.527   4.60
 9.01 Intr - 190395 190342   54  0  0  107   55    57 0.625   2.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  17393  17510  118  1  1   42   77   114 0.823   6.11
S.002 Sngl +  97843  98172  330  0  0   88   44   319 0.899  23.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_1|168_aa
MIPPEQPQQQLQPPSPAPPNHVVTTIENLPAEGSGGGGSLSASSRAGVRQRIRKVLNRMF
EKHWCQPDIQVEVRVNLDSGSASNHGWGERFLIVGASDREKEGYQEQFGGHTNPQTQKDS
AKELEKEGSEVGRKPGEYGVQKPREKMFPEGGNKQSTVLRVIEERTDK

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_1|507_bp
atgatcccccctgagcagccgcagcagcagctgcagccgccgtcgccagccccgccgaac
catgtggtgaccaccatcgagaacctgccggccgagggcagcggcggcggcgggagcctg
tccgcctcctcccgggctggcgtgcgccagaggatccgcaaagtgctgaacagaatgttt
gagaagcactggtgccagccagatatccaagtggaagtaagagtgaatttggattctggg
agtgcatctaatcatggatggggggagcggttcctcattgtgggggcatcagatagagag
aaagaggggtaccaagaacaatttggggggcacactaaccctcaaacacagaaggactca
gcaaaggaactggagaaggaaggatctgaagtaggaaggaaaccaggagagtatggtgtc
cagaagccaagagagaagatgtttccagaaggaggcaataagcagtccactgtgctgaga
gtaattgaggaaaggacagataaatga

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_2|248_aa
MGTPSLKITKKEINHDQGSNLTCSLQFGPKNPCSGPFTTENYQKGRKHLPSHFPRDGQAV
RSRLKLLRSLSDSAGIRPSCWQNANQGGRVWQTEEIWSRRVIRSDPNSTTYLEPTAIAEA
STPGPTQHVRTVDFGGTWTVSVHKKQKVPICRRGAFKHHTWQHIPTLTLQQRQILPPPKP
RGSRTPSPSTRVPRVCGAICGGQGPSLRAQCFPGLQQDPDRYRDSSQPREPGVTKSSTEP
AGIWASPH

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_2|747_bp
atggggacaccaagtcttaaaataacgaagaaggagataaaccatgaccagggatcaaat
ttgacatgcagccttcagtttggacccaagaacccttgttctgggcccttcaccactgag
aattaccaaaaaggaagaaaacatcttccttcccacttcccaagagatggccaagctgtc
aggagcaggctgaagcttctcaggagccttagtgactcagcaggaatccgcccctcctgc
tggcaaaatgccaatcaggggggcagagtgtggcagactgaagaaatttggagtcgaaga
gttattagatcagaccccaactctactacttatttggaacccacagcaatagcagaagca
tccacccctggacctacacagcatgtgaggacagtagactttggagggacttggactgtc
agtgttcacaagaaacagaaagtccctatatgcagaagaggagcatttaaacaccacact
tggcagcacatcccaactctcaccctccaacaaaggcagatcctaccaccacccaagccc
cgaggctcgcgcacgccctccccgtccacccgcgttccgagggtctgcggggctatctgt
ggaggacagggcccctctctaagagcgcagtgtttccccggcctgcagcaggatccagat
aggtacagagactccagccagccccgggaacccggcgtcacaaagagctccactgagccc
gctggcatctgggcttcccctcattag

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_3|184_aa
MRDQYRAGLNQLAVLWLMGMAMFCHLGEYELLYRKIKNLQPELNVVPASRPTITCLFCSC
IGCPRVVHKYLSFSSQTGVGLGVGQGIFLPHRMEHLKLFVSSIHSLLDSGHQAFPEGEQA
LILCLAQLERTYKGQCRAMVLSFDVLLNCLLQGGFCPLHCGCETVIKPSMSAALLGNAGT
VPGI

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_3|555_bp
atgagggatcaatatcgtgctggcttaaaccagctagctgtgctctggctcatggggatg
gcaatgttttgtcacttgggagagtatgagttgctttataggaagattaagaacctccaa
ccagagctgaatgtagtccctgcttccaggcctactattacatgtcttttctgcagttgt
attggatgccccagggtagtgcacaaatacctgtctttcagttcacaaacaggtgttggc
ttaggagtggggcagggtatcttcctaccgcacagaatggagcacctcaagctctttgtc
tccagcattcacagccttctggacagtggacatcaggctttcccagaaggtgagcaagcc
ctgattctttgccttgcccagctggagagaacatataaggggcaatgcagagcaatggtg
ctgtcttttgatgtgctgttgaactgccttttgcagggaggattctgccccttgcattgt
ggatgtgaaactgtgattaaaccttcaatgagtgctgctttactaggcaacgcggggaca
gtgcctggaatctag

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_4|128_aa
MALQEEEIWTQETETRPCEDTGRRWPSTSQGERPQKNQSCCVQNWLVLGLADFKNEATDP
RGVKLQIFAASVTALKGSASGVVSSCRWVRGLADFRSEAEDLCPRQKSSPGPLPDQLDIA
LIGAFTNL

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_4|387_bp
atggctttacaagaagaggaaatttggacacaggaaacagagacaagaccatgtgaagac
acagggagaagatggccatcaacaagccaaggagagaggcctcagaagaaccaatcctgc
tgtgtccagaattggttggttcttggtctcgctgacttcaagaatgaagccacggaccct
cgtggagtgaagctgcagatcttcgcggcgagtgttacagctcttaaaggcagtgcctct
ggagttgttagttcctgccggtgggttcgtggtctcgctgacttcaggagcgaagctgaa
gacctttgccctagacagaaaagttctccaggtcccctacccgatcagttagacatagcg
ctgattggtgcatttacaaacctttag

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_5|160_aa
MVSWARPRAPVLYVAPDMVPCVPAAIALARAKRGQCTGQAVASEGASSKPWWFTCGIGPA
GAYKSRTEVWEPSLRFQRMYGNDWMSRQKLTAGVDPSWRASARAVQKGNVGLESPHRVPT
GALLSGAVRREPPSSRCQNCDPVTACTVHLERPQTLNNSL

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_5|483_bp
atggtttcctgggccaggcccagggcccctgtcctctatgtagccccagacatggtgccc
tgtgtcccagctgctatagctctagccagggctaaaaggggccaatgtacaggtcaggct
gttgcttcagagggtgcaagctccaagccttggtggtttacatgtggcattgggcctgca
ggtgcatacaagtcaagaactgaggtttgggaaccttcacttagatttcagaggatgtat
ggaaatgactggatgtccaggcagaagcttactgcaggggtggacccctcatggagagcc
tctgctagggcagtgcagaagggaaatgttgggttggagtccccacacagagtccctact
ggggcactgcttagtggagctgtgagaagagagccaccatcctccagatgccagaactgt
gatccagtgacagcttgcactgtgcacctggaaaggccacagacactcaacaacagcctg
tga

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_6|267_aa
MHIIKEISEELLLSTSLAAPTAGDDFQQPVLGLLGLVQFLIYQVGAHDTDRTTFAINQAA
IYVHICFGPIHSSLCAWVSSMMSLLELDDKFDILISSNGLGYGQLWEAILPSTAFIDLLT
RAISRLFKSLLQPYETERTSTPKTHLYITIIKVDKTTKMGKKQSRKTGNSKKQSASPPPK
EHSSSPATKQSWTENDFDELREEGFRRSNYSELQEEIQTKGKEVKNFEKNLDECITRITN
TEKCLKELMELKAKARELREECRSLSS

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_6|804_bp
atgcacatcattaaagaaatctctgaagagcttttgctctcgacatcactggcagctcct
actgctggagatgatttccagcagcctgtgttgggcctcttaggcttagttcagttcctt
atctatcaggtgggtgctcatgatacagacaggaccacctttgccataaatcaggcagct
atatatgtgcacatctgcttcggccctatccactcatctctttgtgcatgggtcagttcc
atgatgtctttattggaactagatgataagtttgatatcttgatatcaagtaatggatta
ggatatggacagctttgggaagccattttgccttccacagctttcatagacctcctcaca
agagctatttccagactcttcaaatccttactacaaccctatgagacagaaaggacatcc
acaccaaaaacccatctgtacatcaccatcatcaaagtagataaaaccacaaagatgggg
aaaaaacagagcagaaaaactggaaactctaaaaagcagagtgcctctcctcctccaaag
gaacacagttcctcaccagcaacgaaacaaagctggacggagaatgactttgacgagttg
agagaagaaggcttcagacgatcaaactactccgagctacaggaggaaattcaaaccaaa
ggcaaagaagttaaaaactttgaaaaaaatttagatgaatgtataactagaataaccaat
acagagaagtgcttaaaggagctgatggagctgaaagccaaggctcgagaactacgtgaa
gaatgcagaagcctcagcagctga

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_7|336_aa
MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQAN
NAKAMSARAEAIKALVKPKEVKPKIPKGVSCKLDRHAYVAHPKLGKRALARIAKGLRLCR
PKAKAKAKDQTKAQAAAPASVPAQAPKEIQTTIREYYKHLYANKLENLEEMDKFLDTYTL
PRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQS
IEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANGIQQHIKKL
IYHDQGGFIPVMQGWFNICKSINVIQHINRTKDKTT

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_7|1011_bp
atggccaagtccaagaaccacaccacacacaaccagtcccgaaaatggcacagaaatggt
atcaagaaaccccgatcacaaagatacgaatctcttaagggggtggaccccaagttcctg
aggaacatgcgctttgccaagaagcacaacaaaaagggcctaaagaagatgcaggccaac
aatgccaaggccatgagtgcacgtgccgaggctatcaaggccctcgtaaagcccaaggag
gttaagcccaagatcccaaagggagtcagctgcaagctcgatcgacatgcctacgttgcc
caccccaagcttgggaagcgtgctcttgcccgtattgccaaggggctcaggctgtgccgg
ccaaaggccaaggccaaggccaaggatcaaaccaaggcccaggctgcagctccagcttca
gttccagctcaggctcccaaagaaatacaaactaccatcagagaatactacaaacacctc
tacgcaaataaactagaaaatctagaagaaatggataaattcctcgacacatataccctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttacgaggccagcatcatcctgatacca
aagcctggcagagatacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaaacggaatccagcagcacatcaaaaagctt
atctaccatgatcaagggggcttcatccctgtgatgcaaggctggttcaatatatgcaaa
tcaataaatgtaatccagcatataaacagaaccaaagacaaaaccacatga

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_8|58_aa
MNWYWLVACLELGSTAGGEWWPCEDVPASPSPSSMILYITLSFCKTSSGNSSQNDESN

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_8|177_bp
atgaactggtactggttggtggcctgtttggaattgggcagcacagcaggaggtgagtgg
tggccatgtgaagatgtacctgcttccccttcaccttcctccatgattctatacatcaca
ttgtctttctgtaagacctcctctggaaactcttctcagaatgacgagtctaactga

>gi568815592f:117898975_118099445|GENSCAN_predicted_peptide_9|222_aa
VLGIRKDEPSHGCSMGLQVKRLNKQQKPLHKCDCDSNSDFCYQLLKSSPLTELMKLLLQE
LTSWGSHLVNTVMADPELMGTSFTQASPSKSSPFPICSTFNWSPILVASKAELSLRSSPS
CSFILPLLKCMLKYLPSFIWTIATDQHDPSSSLPIQDHPPYCHQVRALPQVRALPLCRPL
RLNIPAALNLPSKPGPSSVFLVLVNVITLLPTCPNQTLGLPS

>gi568815592f:117898975_118099445|GENSCAN_predicted_CDS_9|669_bp
gttttgggcatacgtaaggatgaaccttctcatggctgctctatggggctccaagtaaag
aggctaaacaaacaacaaaaaccactccacaaatgtgactgtgactctaattctgacttt
tgctaccagctgctaaagagttccccacttactgaattgatgaaactattacttcaggag
ctgacctcatggggctctcatctggttaacacagtgatggcagatcctgagttaatggga
acatcattcacccaagccagcccttccaaaagctctccttttcccatatgttccacattc
aattggtcaccaatactggtagcttctaaggcagaattgtctcttagatcgagcccttcc
tgttcattcattctgccattgctgaaatgtatgcttaaatacttgccatcattcatctgg
actattgcaacagaccaacatgatccctcatcttctctccctattcaagatcatcctcca
tactgccaccaggtgagagctctgcctcaggtgagagctctgcctctctgcaggcctctc
agactcaatattccagcagccctcaacttgccatccaagcctggtccttcttcagtcttc
cttgtgttggtcaatgtcatcactttgctccccacttgtccaaaccagacacttggtctt
ccttcttga