Result of FASTA (ccds) for pF1KB7855
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7855, 551 aa
  1>>>pF1KB7855 551 - 551 aa - 551 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.5322+/-0.00106; mu= -13.8528+/- 0.063
 mean_var=411.1296+/-84.303, 0's: 0 Z-trim(115.4): 24  B-trim: 0 in 0/53
 Lambda= 0.063254
 statistics sampled from 15925 (15944) to 15925 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.49), width:  16
 Scan time:  3.630

The best scores are:                                      opt bits E(32554)
CCDS31609.1 RELA gene_id:5970|Hs108|chr11          ( 551) 3783 359.3 6.6e-99
CCDS44651.1 RELA gene_id:5970|Hs108|chr11          ( 548) 3747 356.1 6.5e-98
CCDS73322.1 RELA gene_id:5970|Hs108|chr11          ( 448) 2853 274.4   2e-73
CCDS74515.1 REL gene_id:5966|Hs108|chr2            ( 587) 1327 135.2 2.1e-31
CCDS1864.1 REL gene_id:5966|Hs108|chr2             ( 619) 1311 133.8 5.9e-31
CCDS46110.1 RELB gene_id:5971|Hs108|chr19          ( 579) 1142 118.3 2.5e-26


>>CCDS31609.1 RELA gene_id:5970|Hs108|chr11               (551 aa)
 initn: 3783 init1: 3783 opt: 3783  Z-score: 1889.1  bits: 359.3 E(32554): 6.6e-99
Smith-Waterman score: 3783; 100.0% identity (100.0% similar) in 551 aa overlap (1-551:1-551)

               10        20        30        40        50        60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
              490       500       510       520       530       540

              550 
pF1KB7 DFSALLSQISS
       :::::::::::
CCDS31 DFSALLSQISS
              550 

>>CCDS44651.1 RELA gene_id:5970|Hs108|chr11               (548 aa)
 initn: 3749 init1: 2762 opt: 3747  Z-score: 1871.4  bits: 356.1 E(32554): 6.5e-98
Smith-Waterman score: 3747; 99.5% identity (99.5% similar) in 551 aa overlap (1-551:1-548)

               10        20        30        40        50        60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
       ::::::::::::::::::::::   :::::::::::::::::::::::::::::::::::
CCDS44 VKKRDLEQAISQRIQTNNNPFQ---EEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
              130       140          150       160       170       

              190       200       210       220       230       240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
       180       190       200       210       220       230       

              250       260       270       280       290       300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
       240       250       260       270       280       290       

              310       320       330       340       350       360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
       300       310       320       330       340       350       

              370       380       390       400       410       420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
       360       370       380       390       400       410       

              430       440       450       460       470       480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
       420       430       440       450       460       470       

              490       500       510       520       530       540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
       480       490       500       510       520       530       

              550 
pF1KB7 DFSALLSQISS
       :::::::::::
CCDS44 DFSALLSQISS
       540        

>>CCDS73322.1 RELA gene_id:5970|Hs108|chr11               (448 aa)
 initn: 2987 init1: 2817 opt: 2853  Z-score: 1431.7  bits: 274.4 E(32554): 2e-73
Smith-Waterman score: 2885; 81.3% identity (81.3% similar) in 551 aa overlap (1-551:1-448)

               10        20        30        40        50        60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
       :::::::::::::::::::::::::::::::::::::::::::::               
CCDS73 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQ---------------
              370       380       390       400                    

              430       440       450       460       470       480
pF1KB7 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
                                                                   
CCDS73 ------------------------------------------------------------
                                                                   

              490       500       510       520       530       540
pF1KB7 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
                                   ::::::::::::::::::::::::::::::::
CCDS73 ----------------------------RPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
                                     410       420       430       

              550 
pF1KB7 DFSALLSQISS
       :::::::::::
CCDS73 DFSALLSQISS
       440        

>>CCDS74515.1 REL gene_id:5966|Hs108|chr2                 (587 aa)
 initn: 1095 init1: 613 opt: 1327  Z-score: 677.5  bits: 135.2 E(32554): 2.1e-31
Smith-Waterman score: 1327; 46.9% identity (70.9% similar) in 461 aa overlap (16-465:5-461)

               10        20        30        40        50        60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
                      : .::.::::::.:::::::::::::::::::::.:::...:.:.
CCDS74            MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPS
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
       :.: .: : : :::.::::. :..::::.:::::::::.::::.  .:    ::::::.:
CCDS74 IQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRC
      50        60        70        80        90       100         

              130       140       150          160       170       
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDY---DLNAVRLCFQVTVRDPSGR-PLRLP
       :::.....::  ::... :::.:: :.: .:    :::.::::::: . :  :     ::
CCDS74 VKKKEVKEAIITRIKAGINPFNVP-EKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALP
     110       120       130        140       150       160        

        180       190       200       210       220       230      
pF1KB7 PVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEAR
       ::.:.::.::::::::::.:::::.: ::  ::::::::::::::.:::: :.   :::.
CCDS74 PVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLNDWEAK
      170       180       190       200       210       220        

        240       250       260       270       280       290      
pF1KB7 GSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRH
       : ::::::::::::::.::::   ..  :: :.::::::::.:.:: :.:.::::  : .
CCDS74 GIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDTY
      230       240       250        260       270       280       

        300       310       320       330       340          350   
pF1KB7 RIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQP---YPFTS
         . :...:   :... . .  . :  :::        .:   . :.   .      . .
CCDS74 GNKAKKQKTTLLFQKLCQ-DHVNFPERPRPGLLGSIGEGRYFKKEPNLFSHDAVVREMPT
       290       300        310       320       330       340      

           360       370       380       390       400        410  
pF1KB7 SLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQ-APAPVPV
       ..:.   . .:.    :. .:. ...:: : .   ..  :.:  . .. :.. .   .: 
CCDS74 GVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPS
        350       360       370       380       390       400      

            420       430          440       450       460         
pF1KB7 LAPGPPQAVAPPAPKPTQAGEGTL---SEALLQLQFDDEDLGALLGNSTDPAVFTDLASV
        . : :  .  :. .  .:... .   .. .. .. ..   . : : : :: ....    
CCDS74 NSQGIPPFLRIPVGNDLNASNACIYNNADDIVGMEASSMPSADLYGIS-DPNMLSNCSVN
        410       420       430       440       450        460     

     470       480       490       500       510       520         
pF1KB7 DNSEFQQLLNQGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLS
                                                                   
CCDS74 MMTTSSDSMGETDNPRLLSMNLENPSCNSVLDPRDLRQLHQMSSSSMSAGANSNTTVFVS
         470       480       490       500       510       520     

>>CCDS1864.1 REL gene_id:5966|Hs108|chr2                  (619 aa)
 initn: 1095 init1: 613 opt: 1311  Z-score: 669.2  bits: 133.8 E(32554): 5.9e-31
Smith-Waterman score: 1314; 50.0% identity (70.9% similar) in 426 aa overlap (16-427:5-421)

               10        20        30        40        50        60
pF1KB7 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
                      : .::.::::::.:::::::::::::::::::::.:::...:.:.
CCDS18            MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPS
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB7 IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
       :.: .: : : :::.::::. :..::::.:::::::::.::::.  .:    ::::::.:
CCDS18 IQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRC
      50        60        70        80        90       100         

              130       140       150          160       170       
pF1KB7 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDY---DLNAVRLCFQVTVRDPSGR-PLRLP
       :::.....::  ::... :::.:: :.: .:    :::.::::::: . :  :     ::
CCDS18 VKKKEVKEAIITRIKAGINPFNVP-EKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALP
     110       120       130        140       150       160        

        180       190       200       210       220       230      
pF1KB7 PVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEAR
       ::.:.::.::::::::::.:::::.: ::  ::::::::::::::.:::: :.   :::.
CCDS18 PVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLNDWEAK
      170       180       190       200       210       220        

        240       250       260       270       280       290      
pF1KB7 GSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRH
       : ::::::::::::::.::::   ..  :: :.::::::::.:.:: :.:.::::  : .
CCDS18 GIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDTY
      230       240       250        260       270       280       

        300       310       320                 330       340      
pF1KB7 RIEEKRKRTYETFKSIMKKSPFSG--PTDPR--------PPPRRIAVPSRSSASVPKPAP
         . :...:   :... .    .:   .:           ::   .  .  ... :.  :
CCDS18 GNKAKKQKTTLLFQKLCQDHVETGFRHVDQDGLELLTSGDPPTLASQSAGITVNFPE-RP
       290       300       310       320       330       340       

        350       360       370       380       390       400      
pF1KB7 QPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQA
       .:  . :      . . :..      .:. ...   :  :  :: .  :.:. .:.  . 
CCDS18 RPGLLGSIGEGRYFKKEPNL------FSHDAVVREMPTGVSSQAESYYPSPGPISSGLSH
        350       360             370       380       390       400

        410       420       430       440       450       460      
pF1KB7 PAPVPVLAPGPPQAVAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDL
        : .  :  .  ..:: :.:.                                       
CCDS18 HASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIPVGNDLNASNA
              410       420       430       440       450       460

>>CCDS46110.1 RELB gene_id:5971|Hs108|chr19               (579 aa)
 initn: 1080 init1: 736 opt: 1142  Z-score: 586.3  bits: 118.3 E(32554): 2.5e-26
Smith-Waterman score: 1142; 42.4% identity (68.4% similar) in 446 aa overlap (7-436:114-552)

                                       10        20        30      
pF1KB7                         MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY
                                     :. :: :. .  :.. : ::::::::::::
CCDS46 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY
            90       100       110        120       130       140  

         40        50        60        70          80        90    
pF1KB7 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD
       .::::::::: :: ::...:: :.:..    :   :...  :: :: ::: ::: :::::
CCDS46 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD
            150       160       170       180       190       200  

          100       110        120       130       140       150   
pF1KB7 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD
       : ::. ...: :     :::.:::::::.:...: :: ..:: . .:...   ... . :
CCDS46 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD
            210       220       230       240       250       260  

           160       170       180       190       200       210   
pF1KB7 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF
       .:.::.:::.. :: .:.  :. ::::.:..:... ::.::.:::.:..:: : ::.:..
CCDS46 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY
            270       280       290       300       310       320  

           220       230       240       250       260       270   
pF1KB7 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR
       ::::::::::: : :.  .::.:..:::::::::.::::.:::: :  .  :: :.. :.
CCDS46 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ
            330       340       350       360       370       380  

           280       290       300       310       320             
pF1KB7 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR
       : .:   :::. : :::   : . ...:::: .    . ...:   :  . :    :   
CCDS46 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL
            390       400       410       420       430       440  

     330       340          350       360       370         380    
pF1KB7 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP
          .:...:.    :.   :.:  :....:      .: .  :.:   .... :  :. :
CCDS46 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP
            450       460       470             480       490      

          390       400       410          420        430       440
pF1KB7 QVLPQAPAPAPAPAMVSALAQAPAPVPVLA--PGP-PQAV-APPAPKPTQAGEGTLSEAL
        .. .     :::  .::.. . .   :..  ::: : .. .  :: : ..: ..:    
CCDS46 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN
        500       510       520       530       540       550      

              450       460       470       480       490       500
pF1KB7 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI
                                                                   
CCDS46 MFPNHYREAAFGGGLLSPGPEAT                                     
        560       570                                              




551 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 21:09:00 2016 done: Fri Nov  4 21:09:00 2016
 Total Scan time:  3.630 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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