GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:36:50

Sequence gi568815596f:60791682_61022532 : 230851 bp : 41.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    121    201   81  0  0   43  113    59 0.509   4.92
 1.02 Intr +    448    608  161  0  2   61   66   129 0.998   5.86
 1.03 Intr +   1946   2034   89  2  2   38   58   113 0.983   2.00
 1.04 Intr +   2290   2510  221  2  2  120   98    90 0.958  10.30
 1.05 Intr +   3283   3339   57  0  0  104   87    62 0.983   5.86
 1.06 Term +   5381   5479   99  1  0   83   42   154 0.998   7.45
 1.07 PlyA +   7258   7263    6                               1.05

 2.11 PlyA -   7328   7323    6                               1.05
 2.10 Term -  13243  13035  209  2  2   32   50   216 0.023   8.72
 2.09 Intr -  16864  16819   46  1  1   63   75    86 0.015   1.86
 2.08 Intr -  19972  19890   83  2  2   83   44    56 0.053  -0.86
 2.07 Intr -  23028  22951   78  1  0   58   56    86 0.048   1.00
 2.06 Intr -  25518  25477   42  1  0   96   83    29 0.031   0.49
 2.05 Intr -  26500  26328  173  0  2   73   -5   102 0.045  -1.94
 2.04 Intr -  26732  26587  146  2  2  101   27   128 0.115   6.16
 2.03 Intr -  26852  26809   44  0  2  146   27     3 0.060  -2.96
 2.02 Intr -  28439  28405   35  1  2   87   99    30 0.070   0.95
 2.01 Init -  28866  28547  320  0  2   64   -4   185 0.044   3.75
 2.00 Prom -  31304  31265   40                              -2.35

 3.00 Prom +  38042  38081   40                              -4.85
 3.01 Init +  38333  38419   87  1  0   74   53    29 0.308  -1.30
 3.02 Intr +  39973  40023   51  0  0  111   80     5 0.433   0.19
 3.03 Term +  43643  44194  552  1  0   48   51   226 0.944   8.22
 3.04 PlyA +  45798  45803    6                               1.05

 4.05 PlyA -  45839  45834    6                               1.05
 4.04 Term -  49381  49177  205  0  1  106   50   150 0.968   8.86
 4.03 Intr -  49638  49497  142  1  1   85   47    83 0.834   2.39
 4.02 Intr -  51405  51284  122  2  2   78   59    72 0.718   2.52
 4.01 Init -  70042  69963   80  1  2   81   84    47 0.147   4.19
 4.00 Prom -  74004  73965   40                              -6.65

 5.00 Prom +  85156  85195   40                              -5.15
 5.01 Init +  90160  90169   10  0  1  109  117    11 0.440   5.88
 5.02 Intr + 100002 100144  143  1  2   96   90   152 0.996  15.35
 5.03 Intr + 102716 102864  149  1  2   79   81   167 0.968  13.21
 5.04 Intr + 109311 109402   92  0  2   65  115    83 0.934   7.42
 5.05 Intr + 125196 125336  141  1  0   79  103    74 0.961   7.40
 5.06 Intr + 126713 126925  213  0  0   69   86   205 0.999  16.16
 5.07 Intr + 128360 128428   69  0  0   72  107    75 0.985   6.04
 5.08 Term + 130082 130854  773  0  2   97   32   391 0.857  26.96
 5.09 PlyA + 133834 133839    6                               1.05

 6.03 PlyA - 134860 134855    6                               1.05
 6.02 Term - 145697 145458  240  2  0   -8   49   333 0.888  14.84
 6.01 Init - 146922 146653  270  0  0   90   74   271 0.974  22.91
 6.00 Prom - 149129 149090   40                              -6.75

 7.15 PlyA - 150305 150300    6                               1.05
 7.14 Term - 150752 150714   39  2  0  121   33    65 0.353   0.51
 7.13 Intr - 153427 153328  100  0  1   32   82    88 0.302   1.79
 7.12 Intr - 156504 156302  203  0  2  112  -15   223 0.168  11.56
 7.11 Intr - 161433 161316  118  2  1   32   63    63 0.339  -2.25
 7.10 Intr - 162307 162252   56  1  2  100  116    44 0.511   5.26
 7.09 Intr - 162477 162401   77  1  2   31   97    87 0.409   2.22
 7.08 Intr - 163393 163337   57  2  0   85   95    37 0.762   2.04
 7.07 Intr - 168836 168711  126  0  0   82   89    60 0.934   5.23
 7.06 Intr - 169867 169782   86  0  2   70   58    83 0.967   2.04
 7.05 Intr - 171195 171145   51  2  0   57   97    59 0.054   0.80
 7.04 Intr - 173803 173742   62  1  2   90   95    24 0.065  -0.09
 7.03 Intr - 217334 217080  255  2  0   82   94   151 0.526  11.82
 7.02 Intr - 225520 225477   44  2  2   60  100    36 0.316  -0.96
 7.01 Init - 226659 226458  202  0  1   34   78   156 0.277   8.29
 7.00 Prom - 228233 228194   40                              -7.45

 8.00 Prom + 229366 229405   40                              -8.25
 8.01 Sngl + 230383 230721  339  0  0   88   37   383 0.997  28.98
 8.02 PlyA + 230772 230777    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 136554 137336  783  2  0   86   47   165 0.837   7.97
S.002 Term + 204447 204629  183  2  0  109   41    90 0.807   2.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_1|235_aa
MKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDN
GTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVS
PPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLK
DVEKDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTLNR

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_1|708_bp
atgaaaattgaagcaactcatgtaaagaaaaaacaacttcaccactaccttcctgcagaa
attcttcaaaagaagaaaaagcaaagtctctctgatgtcaatcgaagctcgggcggactt
caatccaaaagattgtctctggatagcagttgtctggatagctccagagacactgataat
ggaacaccttttaattctccagcgtccaagtctgatagcccttctgtaggagaaacagaa
aggaatagtgctgagcctgctgctgtaattgtggagaagccactgagtgtaccaccagcc
caaggactttccattccagtgattggcgcaaaagttgactctacagtaaaaactgtatca
ccccccactgtgtgtaccattcctaccgtagtaggacgaaatgtcattcctagaatcaca
acacctcacaaccctgcccagggacaaccgcatctgaatggaatgtcaaatataactaag
actgttacacctaagagatcccattccccatccatagatgggactcctaagaggttgaaa
gacgtagaaaaggatgccattggaggagaatctatgcctattccaactattgatacatca
cgcaaaaagagactacccagtaaagaactaccagattcatcatctccagttccagcaaac
aacatccgtgtcatcaaaaattccattcgactgacccttaatcggtaa

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_2|391_aa
MEGAAEKDRRGETSERREELGCWWWERSSALDGPAPGEDCLPTPSPASVSLSIPAESHLH
YSVKFSHLSFKFVCDWFFWDAGQELRIQKAVTLALCPCGKAEGPRSWALSNGGGGDPTAA
RLPKGMITDFGVGGEVTVQTGSPSSGSEMELGQEMELFSHKGCFRAVAVTVDPAHHILFL
PMGPAYLFCVHLPIDPSTSLGSHRMNYSEHHGLHYPGNSFHDGSLCTESLLGNAVKINTC
AVQGTEGTAGNKRGMHLPMEKTENPIAFLRMYGQQQGCAGRWCQCQNKTELEDIQLVSTA
ELTARLLGKAQSGPEFLQQVWGAKPLMAAVAHLERLQQGRCGQGCVCHGASRSLEQAGPL
PTSELEGQEPDVPGCSCSHPVTTADPGIPSF

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_2|1176_bp
atggagggcgcggcagagaaagacagaagaggagaaacatctgaacgccgagaggagttg
ggctgttggtggtgggagaggagttcagctctggacggcccggctccaggggaagactgt
cttcccactccatcccctgcttctgtctctctatccatccccgctgagagccacctccac
tactcagtgaaattctcacatttatccttcaagttcgtgtgtgactggtttttctgggat
gctggacaagagcttaggatacagaaagctgtcacattggccctctgcccttgcggaaag
gcagagggtccacggagctgggctttgagcaacggtggcggtggcgacccaacagcagcc
aggctcccaaaggggatgatcactgactttggggtggggggtgaggtcacagtacagaca
gggagcccaagctcagggtctgaaatggagcttggccaagaaatggagctgttttcacac
aagggatgcttcagagccgtggcggtaactgtggaccctgcacatcacattctcttcctt
cccatgggcccagcttatttgttctgtgtccacctacccatagatccttcaacctccttg
ggaagccatcgaatgaattattctgagcatcacgggttgcattatccaggaaacagtttc
cacgacggcagtttgtgcacagaaagtttattggggaatgctgtcaagattaacacctgt
gctgttcaaggcactgagggtacagcagggaataaaagagggatgcaccttccaatggag
aaaacagaaaaccccatcgccttcctgagaatgtacggccaacagcaaggctgtgcaggt
agatggtgtcagtgtcagaacaaaactgaattagaagacatccagctggtgtccactgca
gaactgactgctcgcttgctgggcaaagcccagagcggcccggagttcctgcagcaggtc
tggggagccaagccactgatggcagcagtggcccacctggagcggctgcagcagggaagg
tgcggccagggctgcgtgtgccatggagccagcaggagcctggaacaggcgggacccctg
cccacttctgaattggaagggcaggagcctgatgttcctgggtgcagctgcagccaccca
gtcacgactgcggacccaggcatccctagcttttag

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_3|229_aa
MASAGRARGQCDERGRRVQGGQVPDKAGRRQGLTMLPMLEGSDYSQLGHKARLHLKKKKK
KKERKKERKKERKKERKKERKKERKKEKINPGINIKTDFSGERREVSIGSSYWSQAVLGP
SACIVTWRTKCLHCDLEEVASLNPGFIICKTRLLILASQMKCSYGASLVLMAAAYMVAAV
ITTVTHLREAGGVGIHRRVTGKGWFRGFGEMSRHGTITEIVRRGLEGRP

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_3|690_bp
atggcaagtgcagggagagcaagagggcagtgtgacgagagagggagaagggtgcagggg
ggccaggttccagataaggctggaaggagacagggtcttactatgttgcccatgctggag
ggcagtgactattcacagctgggccacaaagcaagactccatctcaaaaagaagaagaaa
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaaaaataaatccagggatcaatataaaaacagatttttct
ggggagaggagagaagtaagcatagggagttcctactggagccaggcagtcctgggacca
agtgcctgcattgtgacttggaggaccaagtgcctgcattgtgacttggaggaagttgcc
tctttaaacccgggattcatcatctgcaagacaaggttattgatactcgcctcgcagatg
aagtgtagttatggcgccagcctagtgcttatggctgctgcatacatggtagcagctgtg
attactactgtaactcatctcagggaagcaggaggtgtaggcatccacagaagggtaaca
gggaaaggatggtttaggggctttggggaaatgagccgccatgggactattacagagata
gtcagaaggggactagaaggaaggccatga

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_4|182_aa
MLLNRNVAEERSQSQNWPGVSVGCGGRGKIEDCVWVLLKVPLGGGGTGLSSGGKEGNRNG
PHLHTSETNPIHLAAIKPVPVFLNPGWGALKNACAQVSLQANLITPSVDGSRASRLCEAE
LGPLASASLDLKVFPEGQFGLACRYLCRPQQCTENTPSQHAHKSGSSAKHQTPTLLPMPD
AK

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_4|549_bp
atgctgctcaacaggaatgtggcagaggaaagaagccagagccaaaactggccaggtgtg
agtgtgggctgtggggggagggggaagatcgaggactgtgtctgggtgctgctgaaagtg
cctctaggtggtggggggacagggctgtcttcgggagggaaggaaggcaacaggaatggc
ccacacctccacacctctgaaaccaacccgattcatcttgctgcaatcaaacctgtacca
gtgtttctcaaccctggctggggagctcttaaaaatgcctgtgcccaggtgtctctccag
gccaatctaatcacaccctctgtggatgggtcccgggcatccagactctgtgaagcagaa
ctcgggcctctagcgtctgctagtctagatctaaaggtgtttcctgagggacagtttggc
ctggcatgcaggtacctctgcagaccacaacagtgcaccgaaaacaccccctcccagcac
gcacacaagtctggctcctcagccaaacatcaaacaccaacactgctgcccatgccagat
gccaagtga

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_5|529_aa
MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGK
VRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAII
TRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDNHD
IEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCKAITEPVTVKMQLRRPSDQEVSESM
DFRYLPDEKDTYGNKAKKQKTTLLFQKLCQDHEPNLFSHDAVVREMPTGVSSQAESYYPS
PGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIP
VGNDLNASNACIYNNADDIVGMEASSMPSADLYGISDPNMLSNCSVNMMTTSSDSMGETD
NPRLLSMNLENPSCNSVLDPRDLRQLHQMSSSSMSAGANSNTTVFVSQSDAFEGSDFSCA
DNSMINESGPSNSTNPNSHGFVQDSQYSGIGSMQNEQLSDSFPYEFFQV

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_5|1590_bp
atggcctccggtgcgtataacccgtatatagagataattgaacaacccaggcagagggga
atgcgttttagatacaaatgtgaagggcgatcagcaggcagcattccaggggagcacagc
acagacaacaaccgaacatacccttctatccagattatgaactattatggaaaaggaaaa
gtgagaattacattagtaacaaagaatgacccatataaacctcatcctcatgatttagtt
ggaaaagactgcagagacggctactatgaagcagaatttggacaagaacgcagacctttg
tttttccaaaatttgggtattcgatgtgtgaagaaaaaagaagtaaaagaagctattatt
acaagaataaaggcaggaatcaatccattcaatgtccctgaaaaacagctgaatgatatt
gaagattgtgacctcaatgtggtgagactgtgttttcaagtttttctccctgatgaacat
ggtaatttgacgactgctcttcctcctgttgtctcgaacccaatttatgacaaccatgac
atagaagttcgttttgtgttgaacgattgggaagcaaaaggcatcttttcacaagctgat
gtacaccgtcaagtagccattgttttcaaaactccaccatattgcaaagctatcacagaa
cccgtaacagtaaaaatgcagttgcggagaccttctgaccaggaagttagtgaatctatg
gattttagatatctgccagatgaaaaagatacttacggcaataaagcaaagaaacaaaag
acaactctgcttttccagaaactgtgccaggatcacgaaccaaacttgttttctcatgat
gcagttgtgagagaaatgcctacaggggtttcaagtcaagcagaatcctactatccctca
cctgggcccatctcaagtggattgtcacatcatgcctcaatggcacctctgccttcttca
agctggtcatcagtggcccaccccaccccacgctcaggcaatacaaacccactgagtagt
ttttcaacaaggacacttccttctaattcgcaaggtatcccaccattcctgagaatacct
gttgggaatgatttaaatgcttctaatgcttgcatttacaacaatgccgatgacatagtc
ggaatggaagcgtcatccatgccatcagcagatttatatggtatttctgatcccaacatg
ctgtctaattgttctgtgaatatgatgacaaccagcagtgacagcatgggagagactgat
aatccaagacttctgagcatgaatcttgaaaacccctcatgtaattcagtgttagaccca
agagacttgagacagctccatcagatgtcctcttccagtatgtcagcaggcgccaattcc
aatactactgtttttgtttcacaatcagatgcatttgagggatctgacttcagttgtgca
gataacagcatgataaatgagtcgggaccatcaaacagtactaatccaaacagtcatggt
tttgttcaagatagtcagtattcaggtattggcagtatgcaaaatgagcaattgagtgac
tcctttccatatgaattttttcaagtataa

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_6|169_aa
MAEEGSAAGGVMDINTVLQEVLKTALIHDGLAYEICKAAKASDKCQAHLCVLCVLASNCD
EPMYVKLVEALCAEHQINLIKVDDQKLGESRVLIEMEKQQQDEVDCNIKEAHEKLEMEME
VARLHQCQVMLMRQDLMRCQEELWRMEKLNNQEMQKRRQLEPMREECRH

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_6|510_bp
atggccgaggaaggcagtgctgctggaggtgtaatggacattaatactgttttacaggag
gtgctgaagaccgccctcatccatgatggcctagcatatgaaatttgcaaagctgccaaa
gcctcagacaagtgccaagcccatctttgtgtgctgtgtgtgcttgcatccaactgtgat
gagcctatgtatgtcaagttggtggaggccctttgtgctgaacaccaaatcaacctaatt
aaggttgatgaccagaaactaggggaatcgagggtactcattgagatggagaagcagcag
caggacgaagtggactgcaatatcaaggaggctcatgagaagctggagatggagatggag
gttgctcgccttcatcaatgccaggtcatgctaatgaggcaggatttgatgaggtgtcaa
gaagagctgtggaggatggaaaagctgaacaaccaagagatgcaaaaacgacggcaactg
gagcccatgcgagaggagtgcaggcactag

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_7|491_aa
MQSVRGLSSCCVKPFRLSATSREVNTFKERLCSLSMPWLDKCRSQLLQTKVYALKIEKPF
CQSENRSGPEGVKSQAPASGEKELLNELQKFLETEKDELILEVMNPPPKKIRLQELEDSI
DNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFIKKSLFEVSVVFAHPE
TVEDCHFLMAVMKALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFVAGRYNKYS
RNLPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRTLGNGRPFAI
ELVNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALI
WTNKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHL
KTQAGTYPSTCCTAAIEPELYWKSSCYIKEFVHGDFGRTKPNIGSLMNVTADILELDVES
VDVDWPPALDD

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_7|1476_bp
atgcaaagtgtacggggcttgagttcctgttgcgtaaaacctttccggctttcagcaact
tctcgagaggttaacacctttaaggagagactttgctccctgtcgatgccgtggctggac
aaatgccgctctcaactgctacagaccaaagtctacgctttaaagatagagaagccattc
tgtcaaagtgaaaacagaagcgggccggaaggggttaaatctcaggctccggcgtctggg
gagaaggagttgctcaatgaactacagaaatttctggaaactgaaaaagatgaattaatt
ttggaagttatgaacccacctcccaagaaaattcgactgcaagaactggaagatagtatt
gataatctaagtcaaaatggagagggaaggatctctgttagtcatgttggaagcactgct
tccaagaactcaaatttaaatgtatgtaatgtatgcctaggaattcttcaagaattctgt
gagaaagatttcattaaaaagagcttgtttgaagtgagtgtggtctttgctcacccagaa
acagttgaggattgccacttcctaatggcagttatgaaagccttgaataagataaaggaa
gaggatttccttaagcagtttccttgtcctccaaactcaccaaaggctgtatgcgctgtt
cttgaaattgaatgtgctcatggtgctgtttttgtggctgggagatataataaatactcc
aggaatctaccacaaactccttggataattgatggagaaaggaagctggaatcttcagtg
gaagaattaatttcagatcatctgttggcagtatttaaagcagagagttttaatttttca
tcctctggaagagaagatgtagatgtgagaacattaggaaatggaaggccctttgcaatt
gagctggtgaatcctcatagagtacatttcacttcacaagaaattaaggaacttcagcag
aaaattaataactcatctaacaaaatccaagtacgtgacttgcagcttgtcacaagagag
gcaataggacatatgaaagaaggtgaagaagaaaagacaaagacctacagtgccttaatt
tggacaaataaagcgatacagaagaaagacattgaattcctaaatgacataaaggactta
aaaatcgaccagaaaacacctttgcgcgtccttcaccgaaggcccctggctgtgcgagct
cgcgtcattcacttcatggagacacagtacgtggatgagcaccacttccgcctccacttg
aaaactcaggctggcacgtatccttccacctgctgcactgccgccatcgaaccagaactc
tattggaaaagttcatgctacattaaagagtttgtacatggagacttcgggagaaccaag
ccaaacattgggtccctgatgaatgtgactgcagacattctggagctggatgttgagtct
gtagatgttgactggccacctgctctggatgactag

>gi568815596f:60791682_61022532|GENSCAN_predicted_peptide_8|112_aa
MGRNQSRKAENSKNQSTSSPPKDRSSLPATEQSWTENDFDELTEVGFRRSAITNFSELKE
HVLTRRKEAKNLEKRLDEWLTRINSVEKTLNDLMELKTMAQELRDARTSFNS

>gi568815596f:60791682_61022532|GENSCAN_predicted_CDS_8|339_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaatcagagcacctcatctcct
ccaaaggatcgcagctccttgccagcaacggaacaaagctggacagagaatgactttgac
gagttgacagaagtaggcttcagaaggtcggcaataacaaacttctccgagctaaaggag
catgttctaacccgtcgcaaagaagctaaaaaccttgaaaaaaggttagatgaatggctt
actagaataaacagtgtagagaagaccttaaatgacctgatggagctgaaaaccatggca
caagaacttcgtgatgcacgcacaagcttcaatagctga