GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:40:48

Sequence gi568815576f:40851399_41067887 : 216489 bp : 44.91% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    993    988    6                               1.05
 1.03 Term -   4382   4352   31  1  1   56   48    75 0.615  -2.37
 1.02 Intr -   5231   5033  199  0  1   44   78   187 0.595  11.71
 1.01 Init -  10596   9729  868  0  1   75   83   456 0.556  38.53
 1.00 Prom -  12161  12122   40                              -2.46

 2.00 Prom +  21598  21637   40                              -3.16
 2.01 Init +  29838  29886   49  2  1   77   58    40 0.789  -0.99
 2.02 Intr +  30372  30779  408  1  0   89   87   176 0.189  11.84
 2.03 Intr +  34915  35117  203  2  2   53   80   216 0.152  16.30
 2.04 Intr +  56189  56251   63  1  0  122  100    61 0.784   9.61
 2.05 Intr +  57724  57837  114  0  0   78  102    54 0.986   6.44
 2.06 Intr +  62841  62926   86  2  2  113   91    34 0.975   4.82
 2.07 Intr +  70935  71115  181  0  1   96   75   116 0.975  10.97
 2.08 Intr +  72964  73084  121  0  1   99  107   -10 0.724   2.07
 2.09 Term +  74871  75037  167  1  2   95   43   182 0.979  12.48
 2.10 PlyA +  76085  76090    6                               1.05

 3.00 Prom +  93610  93649   40                              -2.46
 3.01 Init + 100001 100078   78  1  0   93   53   150 0.814  13.06
 3.02 Intr + 102157 102235   79  0  1   99   78    45 0.606   3.72
 3.03 Intr + 112649 112719   71  0  2  113   83   -23 0.203  -1.40
 3.04 Intr + 114939 115042  104  2  2  100   97    26 0.340   3.67
 3.05 Term + 115129 115246  118  1  1   92   38    29 0.317  -3.69
 3.06 PlyA + 115830 115835    6                               1.05

 4.06 PlyA - 117153 117148    6                               1.05
 4.05 Term - 126041 125843  199  1  1  116   47   107 0.674   6.27
 4.04 Intr - 145207 145096  112  2  1   73  110    20 0.393   2.14
 4.03 Intr - 151982 151945   38  1  2  105   86    49 0.352   4.31
 4.02 Intr - 158290 158196   95  1  2  102   49    56 0.215   1.86
 4.01 Init - 159598 159569   30  1  0   34  102    18 0.241  -2.33
 4.00 Prom - 165077 165038   40                              -4.96

 5.00 Prom + 170210 170249   40                              -2.06
 5.01 Init + 178368 178415   48  2  0   65   97    29 0.308   2.45
 5.02 Intr + 183123 183233  111  2  0   50   79    92 0.394   5.08
 5.03 Term + 197977 198204  228  0  0   87   49   102 0.201   2.83
 5.04 PlyA + 202728 202733    6                               1.05

 6.00 Prom + 207395 207434   40                              -3.76
 6.01 Sngl + 212654 213238  585  1  0   99   46   737 0.999  66.79
 6.02 PlyA + 213286 213291    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_1|365_aa
MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDE
KRDIYDKYGTEGLNGGGSHFDDECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLL
NRPGSSYGNRNRDAGYFFSTASEYPIFEKFSSYDTGYTSQGSLGHEGLTSFSSLAFDNSG
MDNYISVTTSDKIVNGRNINTKKIIESDQEREAEDNGELTFFLVNSVANEEGFAKECSWR
TQSFNNYSPNSHSSKHVSQYTFVDNDEGGISWVTSNRDPPIFSAGVKEGAAPFCAVTPSQ
RLGLEPGRSPPSFAHHLPTMDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVERVLRY
VQGVN

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_1|1098_bp
atggtggattactatgaagttctaggactgcaaagatatgcttcacctgaggacattaaa
aaagcttatcataaagtggcacttaaatggcaccctgataaaaatccagaaaataaagaa
gaagcagagagaaaattcaaagaagtagctgaggcatacgaggtattatcaaatgatgag
aaacgggacatttatgataaatatggcacagaaggattaaacggaggtggaagtcatttt
gatgatgaatgtgagtacggcttcacattccataagccagatgatgtttttaaagaaatt
tttcatgaaagggatccattttcttttcacttctttgaagactcgcttgaggacctgtta
aatcgtccaggaagctcctatggaaacagaaacagagatgcaggatactttttctccact
gccagtgaatatccaatttttgagaaattttcttcatatgatacaggatatacatcacag
ggttcattggggcatgaaggccttacttctttctcttccctggcttttgataatagtggg
atggacaactacatatctgttacaacttcagacaaaatcgttaatggcagaaatattaat
acaaagaaaattattgaaagtgatcaagaaagagaagctgaagataatggagagttgaca
ttttttcttgtaaatagtgtggccaatgaagagggctttgcaaaagaatgcagctggaga
acacagtcattcaacaactattcaccaaattctcacagctccaaacatgtatctcaatat
actttcgtggacaatgatgagggaggtatatcttgggttaccagcaacagagatccccct
attttctcagcaggagtcaaagagggtgccgcccccttctgcgcggtcacgccgagccag
cgcctgggcctggaaccgggccgtagcccccccagtttcgcccaccacctccctaccatg
gacccccgcaaagtgaacgagcttcgggcctttgtgaaaatgtgtaagcaggatccgagc
gttctgcacaccgaggaaatgcgcttcctgagggagtgggtggagagagtacttcgctac
gtgcaaggagttaattga

>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_2|463_aa
MRFYHVGRAGLELLTSGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPT
YYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWD
GPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTE
AKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYA
KFEFECRARGADILAYPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDIT
RTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKN
IKENNAFKAARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAP
EKFRGLGVRIEDDVVVTQDSPLILSADCPKEMNDIEQICSQAS

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_2|1392_bp
atgaggttttaccatgttggccgggctggtcttgaactcctgacctcaggggaggtaact
ccaggactatctcaggtggaatatgcacttcgcagacacaaactaatgtctctgatccag
aaggaagctcaagggcagagtgggacagaccagacagtggttgtgctctccaaccctaca
tactacatgagcaacgatattccctatactttccaccaagacaacaatttcctgtaccta
tgtggattccaagagcctgatagcattcttgtccttcagagcctccctggcaaacaatta
ccatcacacaaagccatactttttgtgcctcggcgagatcccagtcgagaactttgggat
ggtccgcgatctggcactgatggagcaatagctctaactggagtagacgaagcctatacg
ctagaagaatttcaacatcttctaccaaaaatgaaagctgagacgaacatggtttggtat
gactggatgaggccctcacatgcacagcttcactctgactatatgcagcccctgactgag
gccaaagccaagagcaagaacaaggttcggggtgttcagcagctgatacagcgcctccgg
ctgatcaagtctcctgcagaaattgaacgaatgcagattgctgggaagctgacatcacag
gctttcatagaaaccatgttcaccagtaaagcccctgtggaagaagcctttctttatgct
aagtttgaatttgaatgccgggctcgtggcgcagacattttagcctatccacctgtggtg
gctggtggtaatcggtcaaacactttgcactatgtgaaaaataatcaactcatcaaggat
ggggaaatggtgcttctggatggaggttgtgagtcttcctgctatgtgagtgacatcaca
cgtacgtggccagtcaatggcaggttcaccgcacctcaggcagaactctatgaagccgtt
ctagagatccaaagagattgtttggccctctgcttccctgggacaagcttggagaacatc
tacagcatgatgctgaccctgataggacagaagcttaaagacttggggatcatgaagaac
attaaggaaaataatgccttcaaggctgctcgaaaatactgtcctcatcatgttggccac
tacctcgggatggatgtccatgacactccagacatgccccgttccctccctctgcagcct
gggatggtaatcacaattgagcccggcatttatattccagaggatgacaaagatgcccca
gagaagtttcggggtcttggtgtacgaattgaggatgatgtagtggtgactcaggactca
cctctcatcctttctgcagactgtcccaaagagatgaatgacattgaacagatatgcagc
caggcttcttga

>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_3|149_aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNRVVCSDLVGLYQDTVLLQSAQWVRWEREKLSNTLRELYKSQLKR
DLPKGCHSKRIFVLLGIPSVLAVDSTLSY

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_3|450_bp
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagctaaccag
gcgtccgctacttcagaagagtgtactgtcgcatggggagtctgtaaccgcgtggtatgc
tctgacttagttgggctctaccaggacaccgtactgctgcaaagtgctcagtgggtgagg
tgggagagggagaagctgtcgaatacccttcgtgagttatacaagagtcagctgaaaagg
gatcttccaaaaggctgtcactctaagagaatatttgtcctcttgggtatccctagtgta
ctagctgtggattccactcttagttactga

>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_4|157_aa
MPLKDSVLQKPLRGQLGPEPVPTPMASLFQACLPGEVQDAAGFSTWYKKSGPEKDLFTWL
FESWLLVNKLVLNPALHTTVFPCLGFARGPSRAPTTLEQVIVCPGDLVWDSPPMSDDCLH
QVSQLACHIPKEDFPAPLLEVATQFYSMTPQPSSLST

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_4|474_bp
atgcctctgaaagacagtgtcctgcaaaagcctttgcgaggtcagcttggccctgagcct
gtgcccacacccatggcctccctctttcaggcctgtttacctggtgaggtgcaggatgct
gcagggttctccacctggtacaagaagagtggcccagagaaagacctttttacttggctc
ttcgaaagctggctcttggtcaacaaacttgtcctcaaccccgcccttcacaccacagtc
ttcccctgcctggggtttgctcgggggcccagcagagctccaaccacactggagcaagtc
atcgtctgccccggggacttggtctgggactccccacctatgtcagatgactgtcttcat
caagtctcacaacttgcctgtcatatccccaaagaggacttccctgcccctctgttagaa
gtggccacacagttttactctatgacacctcaaccctcttcactgtctacgtga

>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_5|128_aa
MLTFYQTSSFKVMGYKHFLTARVQAEHVPVARESPAGFESWCMQQEALGYTGTPTHHGEE
QPLTMPTCLVSPVIYGPVGPSCWPWTQQLLKVKQALCEGCKSQDGPSAVVPSWGQGGDHV
ASLKTNAS

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_5|387_bp
atgctaacattctatcagaccagcagcttcaaagtgatgggctataagcacttccttact
gcccgtgttcaggctgagcatgttcctgtggccagagaaagccctgcaggattcgagtcc
tggtgcatgcagcaggaagccttggggtacacaggaacacccacccaccatggcgaggag
cagccgctgactatgccgacctgtttagtgtcgccagtgatttatggcccagtggggccc
agctgttggccgtggacacagcagctgctcaaggttaagcaggccctgtgtgagggatgc
aagtcacaggatggacccagtgcagttgttccctcttggggtcaagggggcgatcatgtt
gccagtctgaaaaccaacgcaagctaa

>gi568815576f:40851399_41067887|GENSCAN_predicted_peptide_6|194_aa
MPVARSWVCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAAREL
LTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLA
KSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKK
GQGGAGAGDHKEED

>gi568815576f:40851399_41067887|GENSCAN_predicted_CDS_6|585_bp
atgccagtggcccggagctgggtttgtcgcaaaacttacgtgaccccgcggagatccttt
gagaaatctcgtctcgaccaagagctgaagctgatcgaagagtatgggctccggaataaa
cgtgaggtctggagggtcaaatttaccctggccaagatccgcaaggccgcccgggaactg
ctgacgcttgatcagaaggacccacggcgtctgttcgaaggcaatgccctgctgtggcgg
ctggtctgcattggggtgctggatgagggcaagatgaagctggattacatcctgggcctg
aagatagaggatttcttagagagacgcctacagacccaggtcttcaagctgggcttggcc
aagtccatccaccacgctcgcgtgctgatccgccagcgccatttcagggtccgcaagcag
gtggtgaacatcccgtccttcattgtccgcctggattcccagaagcacatcgacttctct
ctgtgctctccctatgggggtggccgcccgggccgcgtgaagaggaagaatgccaagaag
ggccagggtggggctggggctggagaccacaaggaggaggattaa