Result of FASTA (omim) for pF1KE0042
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0042, 511 aa
  1>>>pF1KE0042 511 - 511 aa - 511 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7004+/-0.000318; mu= 12.2600+/- 0.020
 mean_var=104.4994+/-20.422, 0's: 0 Z-trim(118.6): 91  B-trim: 62 in 1/55
 Lambda= 0.125463
 statistics sampled from 31537 (31628) to 31537 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.371), width:  16
 Scan time: 10.580

The best scores are:                                      opt bits E(85289)
NP_001243625 (OMIM: 616347) PR domain-containing p ( 477) 3264 601.3 2.1e-171
XP_011518533 (OMIM: 616347) PREDICTED: PR domain-c ( 477) 3264 601.3 2.1e-171
XP_011518526 (OMIM: 616347) PREDICTED: PR domain-c (1177) 3116 574.7 5.2e-163
XP_011518524 (OMIM: 616347) PREDICTED: PR domain-c (1177) 3116 574.7 5.2e-163
XP_011518525 (OMIM: 616347) PREDICTED: PR domain-c (1177) 3116 574.7 5.2e-163
XP_011518527 (OMIM: 616347) PREDICTED: PR domain-c (1177) 3116 574.7 5.2e-163
NP_001243624 (OMIM: 616347) PR domain-containing p (1177) 3116 574.7 5.2e-163
XP_011518528 (OMIM: 616347) PREDICTED: PR domain-c ( 994) 1838 343.3 1.9e-93
XP_011518529 (OMIM: 616347) PREDICTED: PR domain-c ( 994) 1838 343.3 1.9e-93
XP_011518530 (OMIM: 616347) PREDICTED: PR domain-c ( 968) 1721 322.1 4.5e-87
XP_011518532 (OMIM: 616347) PREDICTED: PR domain-c ( 516) 1297 245.2 3.4e-64
XP_016878371 (OMIM: 609759) PREDICTED: probable hi ( 419)  531 106.5 1.5e-22
XP_016878372 (OMIM: 609759) PREDICTED: probable hi ( 419)  531 106.5 1.5e-22
XP_016878373 (OMIM: 609759) PREDICTED: probable hi ( 313)  529 106.1 1.6e-22
XP_005256331 (OMIM: 609759) PREDICTED: probable hi ( 492)  531 106.6 1.8e-22
NP_001091643 (OMIM: 609759) probable histone-lysin ( 492)  531 106.6 1.8e-22
NP_064612 (OMIM: 609760) histone-lysine N-methyltr ( 894)  535 107.4 1.8e-22
NP_001297143 (OMIM: 609760) histone-lysine N-methy ( 894)  535 107.4 1.8e-22
XP_011521131 (OMIM: 609759) PREDICTED: probable hi ( 377)  367 76.8 1.2e-13
XP_011534365 (OMIM: 603423) PREDICTED: PR domain z ( 789)  317 68.0 1.2e-10
XP_016866676 (OMIM: 603423) PREDICTED: PR domain z ( 789)  317 68.0 1.2e-10
XP_006715613 (OMIM: 603423) PREDICTED: PR domain z ( 796)  317 68.0 1.2e-10
NP_001189 (OMIM: 603423) PR domain zinc finger pro ( 825)  317 68.0 1.2e-10
XP_011534364 (OMIM: 603423) PREDICTED: PR domain z ( 839)  317 68.0 1.3e-10
NP_036538 (OMIM: 605780) PR domain zinc finger pro ( 801)  303 65.4 7.1e-10
NP_078780 (OMIM: 611781) PR domain zinc finger pro ( 571)  248 55.4 5.3e-07
XP_011542028 (OMIM: 616982,617039) PREDICTED: puta ( 395)  230 52.0 3.7e-06
NP_001129711 (OMIM: 616982,617039) putative histon ( 595)  230 52.1 5.2e-06
NP_878911 (OMIM: 603423) PR domain zinc finger pro ( 691)  231 52.4 5.2e-06
XP_016857753 (OMIM: 601196) PREDICTED: PR domain z ( 310)  225 51.1 5.6e-06
NP_001129082 (OMIM: 601196) PR domain zinc finger  ( 226)  213 48.8   2e-05
XP_011515874 (OMIM: 611781) PREDICTED: PR domain z ( 316)  212 48.7 2.9e-05
XP_016857746 (OMIM: 601196) PREDICTED: PR domain z (1682)  223 51.1   3e-05
NP_056950 (OMIM: 601196) PR domain zinc finger pro (1682)  223 51.1   3e-05
NP_036363 (OMIM: 601196) PR domain zinc finger pro (1718)  223 51.1 3.1e-05
XP_016857745 (OMIM: 601196) PREDICTED: PR domain z (1718)  223 51.1 3.1e-05
XP_016857744 (OMIM: 601196) PREDICTED: PR domain z (1718)  223 51.1 3.1e-05
XP_005247283 (OMIM: 165215,616738) PREDICTED: MDS1 ( 906)  210 48.6 9.1e-05
XP_016861366 (OMIM: 165215,616738) PREDICTED: MDS1 ( 907)  210 48.6 9.1e-05
XP_005247282 (OMIM: 165215,616738) PREDICTED: MDS1 ( 915)  210 48.6 9.2e-05
XP_005247281 (OMIM: 165215,616738) PREDICTED: MDS1 ( 916)  210 48.6 9.2e-05
XP_005247272 (OMIM: 165215,616738) PREDICTED: MDS1 (1230)  210 48.7 0.00012
XP_005247271 (OMIM: 165215,616738) PREDICTED: MDS1 (1231)  210 48.7 0.00012
NP_004982 (OMIM: 165215,616738) MDS1 and EVI1 comp (1239)  210 48.7 0.00012
XP_005247270 (OMIM: 165215,616738) PREDICTED: MDS1 (1240)  210 48.7 0.00012
XP_005268650 (OMIM: 605780) PREDICTED: PR domain z ( 808)  192 45.3 0.00079
XP_016857743 (OMIM: 601196) PREDICTED: PR domain z (1608)  180 43.3  0.0064
XP_011534366 (OMIM: 603423) PREDICTED: PR domain z ( 667)  174 42.0  0.0065
XP_016857742 (OMIM: 601196) PREDICTED: PR domain z (1644)  180 43.3  0.0065


>>NP_001243625 (OMIM: 616347) PR domain-containing prote  (477 aa)
 initn: 3264 init1: 3264 opt: 3264  Z-score: 3198.3  bits: 601.3 E(85289): 2.1e-171
Smith-Waterman score: 3264; 100.0% identity (100.0% similar) in 477 aa overlap (35-511:1-477)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
NP_001                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510 
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG
       :::::::::::::::::::::::::::
NP_001 EFSDPAGKLVWMRLLSEGRVRSGLCGG
              460       470       

>>XP_011518533 (OMIM: 616347) PREDICTED: PR domain-conta  (477 aa)
 initn: 3264 init1: 3264 opt: 3264  Z-score: 3198.3  bits: 601.3 E(85289): 2.1e-171
Smith-Waterman score: 3264; 100.0% identity (100.0% similar) in 477 aa overlap (35-511:1-477)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510 
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG
       :::::::::::::::::::::::::::
XP_011 EFSDPAGKLVWMRLLSEGRVRSGLCGG
              460       470       

>>XP_011518526 (OMIM: 616347) PREDICTED: PR domain-conta  (1177 aa)
 initn: 3116 init1: 3116 opt: 3116  Z-score: 3047.6  bits: 574.7 E(85289): 5.2e-163
Smith-Waterman score: 3116; 100.0% identity (100.0% similar) in 456 aa overlap (35-490:1-456)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510                                  
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG                                 
       ::::::                                                      
XP_011 EFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQE
              460       470       480       490       500       510

>>XP_011518524 (OMIM: 616347) PREDICTED: PR domain-conta  (1177 aa)
 initn: 3116 init1: 3116 opt: 3116  Z-score: 3047.6  bits: 574.7 E(85289): 5.2e-163
Smith-Waterman score: 3116; 100.0% identity (100.0% similar) in 456 aa overlap (35-490:1-456)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510                                  
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG                                 
       ::::::                                                      
XP_011 EFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQE
              460       470       480       490       500       510

>>XP_011518525 (OMIM: 616347) PREDICTED: PR domain-conta  (1177 aa)
 initn: 3116 init1: 3116 opt: 3116  Z-score: 3047.6  bits: 574.7 E(85289): 5.2e-163
Smith-Waterman score: 3116; 100.0% identity (100.0% similar) in 456 aa overlap (35-490:1-456)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510                                  
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG                                 
       ::::::                                                      
XP_011 EFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQE
              460       470       480       490       500       510

>>XP_011518527 (OMIM: 616347) PREDICTED: PR domain-conta  (1177 aa)
 initn: 3116 init1: 3116 opt: 3116  Z-score: 3047.6  bits: 574.7 E(85289): 5.2e-163
Smith-Waterman score: 3116; 100.0% identity (100.0% similar) in 456 aa overlap (35-490:1-456)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510                                  
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG                                 
       ::::::                                                      
XP_011 EFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQE
              460       470       480       490       500       510

>>NP_001243624 (OMIM: 616347) PR domain-containing prote  (1177 aa)
 initn: 3116 init1: 3116 opt: 3116  Z-score: 3047.6  bits: 574.7 E(85289): 5.2e-163
Smith-Waterman score: 3116; 100.0% identity (100.0% similar) in 456 aa overlap (35-490:1-456)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
NP_001                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
              280       290       300       310       320       330

          370       380       390       400       410       420    
pF1KE0 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKA
              340       350       360       370       380       390

          430       440       450       460       470       480    
pF1KE0 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELP
              400       410       420       430       440       450

          490       500       510                                  
pF1KE0 EFSDPAGKLVWMRLLSEGRVRSGLCGG                                 
       ::::::                                                      
NP_001 EFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQE
              460       470       480       490       500       510

>>XP_011518528 (OMIM: 616347) PREDICTED: PR domain-conta  (994 aa)
 initn: 1838 init1: 1838 opt: 1838  Z-score: 1798.5  bits: 343.3 E(85289): 1.9e-93
Smith-Waterman score: 1838; 100.0% identity (100.0% similar) in 273 aa overlap (218-490:1-273)

       190       200       210       220       230       240       
pF1KE0 KSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACR
                                     ::::::::::::::::::::::::::::::
XP_011                               MRYVVISREEREQNLLAFQHSERIYFRACR
                                             10        20        30

       250       260       270       280       290       300       
pF1KE0 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL
               40        50        60        70        80        90

       310       320       330       340       350       360       
pF1KE0 SVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRK
              100       110       120       130       140       150

       370       380       390       400       410       420       
pF1KE0 VPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKADSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKADSP
              160       170       180       190       200       210

       430       440       450       460       470       480       
pF1KE0 AEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELPEFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELPEFS
              220       230       240       250       260       270

       490       500       510                                     
pF1KE0 DPAGKLVWMRLLSEGRVRSGLCGG                                    
       :::                                                         
XP_011 DPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLK
              280       290       300       310       320       330

>>XP_011518529 (OMIM: 616347) PREDICTED: PR domain-conta  (994 aa)
 initn: 1838 init1: 1838 opt: 1838  Z-score: 1798.5  bits: 343.3 E(85289): 1.9e-93
Smith-Waterman score: 1838; 100.0% identity (100.0% similar) in 273 aa overlap (218-490:1-273)

       190       200       210       220       230       240       
pF1KE0 KSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACR
                                     ::::::::::::::::::::::::::::::
XP_011                               MRYVVISREEREQNLLAFQHSERIYFRACR
                                             10        20        30

       250       260       270       280       290       300       
pF1KE0 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL
               40        50        60        70        80        90

       310       320       330       340       350       360       
pF1KE0 SVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRK
              100       110       120       130       140       150

       370       380       390       400       410       420       
pF1KE0 VPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKADSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKADSP
              160       170       180       190       200       210

       430       440       450       460       470       480       
pF1KE0 AEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELPEFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELPEFS
              220       230       240       250       260       270

       490       500       510                                     
pF1KE0 DPAGKLVWMRLLSEGRVRSGLCGG                                    
       :::                                                         
XP_011 DPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLK
              280       290       300       310       320       330

>>XP_011518530 (OMIM: 616347) PREDICTED: PR domain-conta  (968 aa)
 initn: 1721 init1: 1721 opt: 1721  Z-score: 1684.2  bits: 322.1 E(85289): 4.5e-87
Smith-Waterman score: 1721; 98.0% identity (99.2% similar) in 252 aa overlap (35-286:1-252)

           10        20        30        40        50        60    
pF1KE0 AEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                     ::::::::::::::::::::::::::::::
XP_011                               MTENMKECLAQTNAAVGDMVTVVKTEVCSP
                                             10        20        30

           70        80        90       100       110       120    
pF1KE0 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
               40        50        60        70        80        90

          130       140       150       160       170       180    
pF1KE0 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQIS
              100       110       120       130       140       150

          190       200       210       220       230       240    
pF1KE0 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFR
              160       170       180       190       200       210

          250       260       270       280       290       300    
pF1KE0 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP
       :::::::::::::::::::::::::::::::::::::. . .                  
XP_011 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARASESMVSGPAIMEDDDQEVDSAD
              220       230       240       250       260       270

          310       320       330       340       350       360    
pF1KE0 IHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLV
                                                                   
XP_011 ESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQS
              280       290       300       310       320       330




511 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:24:50 2016 done: Fri Nov  4 06:24:52 2016
 Total Scan time: 10.580 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com