Result of FASTA (omim) for pF1KB6439
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6439, 314 aa
  1>>>pF1KB6439 314 - 314 aa - 314 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8602+/-0.000401; mu= 20.9541+/- 0.026
 mean_var=208.0521+/-52.457, 0's: 0 Z-trim(115.2): 253  B-trim: 1476 in 1/55
 Lambda= 0.088918
 statistics sampled from 25044 (25503) to 25044 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.299), width:  16
 Scan time:  7.710

The best scores are:                                      opt bits E(85289)
XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-pr ( 314) 2122 285.1 1.3e-76
NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-tr ( 314) 2122 285.1 1.3e-76
NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans ( 301) 1895 255.9 7.2e-68
NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans ( 296) 1890 255.3 1.1e-67
XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-pr ( 230) 1584 215.8 6.6e-56
XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-pr ( 217) 1357 186.7 3.7e-47
XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-pr ( 301) 1209 167.9 2.2e-41
XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-pr ( 288)  982 138.8 1.3e-32
NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-tr ( 283)  977 138.1   2e-32
NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans ( 207)  769 111.2 1.9e-24
NP_066953 (OMIM: 123840) peptidyl-prolyl cis-trans ( 165)  713 103.8 2.5e-22
XP_005269436 (OMIM: 604486) PREDICTED: peptidyl-pr ( 201)  655 96.5 4.6e-20
XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 S (2281)  647 97.5 2.7e-19
XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 S (2282)  647 97.5 2.7e-19
XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199)  647 97.8 3.1e-19
NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224)  647 97.8 3.1e-19
XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232)  647 97.8 3.1e-19
XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232)  647 97.8 3.1e-19
XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250)  647 97.8 3.1e-19
XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257)  647 97.8 3.1e-19
XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258)  647 97.8 3.2e-19
NP_006338 (OMIM: 606095) peptidyl-prolyl cis-trans ( 177)  624 92.5 6.9e-19
XP_005270419 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177)  624 92.5 6.9e-19
XP_016855546 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177)  624 92.5 6.9e-19
NP_001137504 (OMIM: 608608) peptidyl-prolyl cis-tr ( 164)  623 92.3 7.3e-19
NP_000933 (OMIM: 123841,259440) peptidyl-prolyl ci ( 216)  600 89.6 6.4e-18
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370)  591 88.8 1.8e-17
NP_000934 (OMIM: 123842) peptidyl-prolyl cis-trans ( 212)  576 86.5 5.3e-17
XP_016860791 (OMIM: 606093) PREDICTED: peptidyl-pr ( 272)  544 82.6   1e-15
XP_005247023 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754)  544 83.4 1.6e-15
XP_005247024 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754)  544 83.4 1.6e-15
NP_004783 (OMIM: 606093) peptidyl-prolyl cis-trans ( 754)  544 83.4 1.6e-15
XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor re (1435)  545 84.0 1.9e-15
XP_006713234 (OMIM: 161565) PREDICTED: NK-tumor re (1436)  545 84.0 1.9e-15
NP_005376 (OMIM: 161565) NK-tumor recognition prot (1462)  545 84.1 1.9e-15
XP_005265230 (OMIM: 161565) PREDICTED: NK-tumor re (1463)  545 84.1 1.9e-15
XP_016855547 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134)  488 74.8 1.1e-13
XP_016855548 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134)  488 74.8 1.1e-13
NP_001317439 (OMIM: 606095) peptidyl-prolyl cis-tr ( 134)  488 74.8 1.1e-13
NP_001287910 (OMIM: 123840) peptidyl-prolyl cis-tr ( 105)  474 72.8 3.4e-13
NP_057143 (OMIM: 601301) peptidyl-prolyl cis-trans ( 166)  394 62.9 5.1e-10
XP_016884195 (OMIM: 607588) PREDICTED: peptidyl-pr ( 266)  380 61.5 2.2e-09
XP_016884194 (OMIM: 607588) PREDICTED: peptidyl-pr ( 362)  380 61.8 2.5e-09
XP_011528351 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438)  380 61.9 2.7e-09
XP_011528353 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438)  380 61.9 2.7e-09
XP_011528352 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438)  380 61.9 2.7e-09
NP_001304925 (OMIM: 607588) peptidyl-prolyl cis-tr ( 520)  380 62.1 2.9e-09
XP_005261505 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520)  380 62.1 2.9e-09
XP_011528349 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520)  380 62.1 2.9e-09
XP_011528348 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520)  380 62.1 2.9e-09


>>XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-prolyl  (314 aa)
 initn: 2122 init1: 2122 opt: 2122  Z-score: 1496.7  bits: 285.1 E(85289): 1.3e-76
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
              250       260       270       280       290       300

              310    
pF1KB6 RNWGKSQKVESHTI
       ::::::::::::::
XP_016 RNWGKSQKVESHTI
              310    

>>NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-trans   (314 aa)
 initn: 2122 init1: 2122 opt: 2122  Z-score: 1496.7  bits: 285.1 E(85289): 1.3e-76
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
              250       260       270       280       290       300

              310    
pF1KB6 RNWGKSQKVESHTI
       ::::::::::::::
NP_001 RNWGKSQKVESHTI
              310    

>>NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans iso  (301 aa)
 initn: 1890 init1: 1890 opt: 1895  Z-score: 1339.4  bits: 255.9 E(85289): 7.2e-68
Smith-Waterman score: 1895; 97.2% identity (98.3% similar) in 290 aa overlap (1-290:1-289)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       ::::::::::::::::::::::::::::::::::::::: :  .: .: .          
NP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE
              250       260       270        280       290         

              310    
pF1KB6 RNWGKSQKVESHTI
                     
NP_006 YV            
     300             

>>NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans iso  (296 aa)
 initn: 1890 init1: 1890 opt: 1890  Z-score: 1336.0  bits: 255.3 E(85289): 1.1e-67
Smith-Waterman score: 1890; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       :::::::::::::::::::::::::::::::::::::::                     
NP_982 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEKQEESAITSQPRSWKLT    
              250       260       270       280       290          

              310    
pF1KB6 RNWGKSQKVESHTI

>>XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-prolyl  (230 aa)
 initn: 1584 init1: 1584 opt: 1584  Z-score: 1124.7  bits: 215.8 E(85289): 6.6e-56
Smith-Waterman score: 1584; 100.0% identity (100.0% similar) in 230 aa overlap (85-314:1-230)

           60        70        80        90       100       110    
pF1KB6 ELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENK
                                     ::::::::::::::::::::::::::::::
XP_011                               MRIKEGSSRPVWSDDDWLKKFSGKTLEENK
                                             10        20        30

          120       130       140       150       160       170    
pF1KB6 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
               40        50        60        70        80        90

          180       190       200       210       220       230    
pF1KB6 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
              100       110       120       130       140       150

          240       250       260       270       280       290    
pF1KB6 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
              160       170       180       190       200       210

          300       310    
pF1KB6 NKDGQERNWGKSQKVESHTI
       ::::::::::::::::::::
XP_011 NKDGQERNWGKSQKVESHTI
              220       230

>>XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-prolyl  (217 aa)
 initn: 1352 init1: 1352 opt: 1357  Z-score: 967.6  bits: 186.7 E(85289): 3.7e-47
Smith-Waterman score: 1357; 96.1% identity (97.6% similar) in 206 aa overlap (85-290:1-205)

           60        70        80        90       100       110    
pF1KB6 ELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENK
                                     ::::::::::::::::::::::::::::::
XP_016                               MRIKEGSSRPVWSDDDWLKKFSGKTLEENK
                                             10        20        30

          120       130       140       150       160       170    
pF1KB6 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
               40        50        60        70        80        90

          180       190       200       210       220       230    
pF1KB6 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
              100       110       120       130       140       150

          240       250       260       270       280       290    
pF1KB6 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
       ::::::::::::::::::::::::::::::::::::::::::::: :  .: .: .    
XP_016 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVI
              160       170       180       190        200         

          300       310    
pF1KB6 NKDGQERNWGKSQKVESHTI
                           
XP_016 IADCGEYV            
     210                   

>>XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-prolyl  (301 aa)
 initn: 1198 init1: 1198 opt: 1209  Z-score: 863.8  bits: 167.9 E(85289): 2.2e-41
Smith-Waterman score: 1999; 95.9% identity (95.9% similar) in 314 aa overlap (1-314:1-301)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::             :::::::::::::::::::::::::::::::::::::::
XP_006 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
                           130       140       150       160       

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       170       180       190       200       210       220       

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       230       240       250       260       270       280       

              310    
pF1KB6 RNWGKSQKVESHTI
       ::::::::::::::
XP_006 RNWGKSQKVESHTI
       290       300 

>>XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-prolyl  (288 aa)
 initn: 966 init1: 966 opt: 982  Z-score: 706.6  bits: 138.8 E(85289): 1.3e-32
Smith-Waterman score: 1772; 92.8% identity (93.8% similar) in 290 aa overlap (1-290:1-276)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::             :::::::::::::::::::::::::::::::::::::::
XP_006 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
                           130       140       150       160       

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       170       180       190       200       210       220       

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       ::::::::::::::::::::::::::::::::::::::: :  .: .: .          
XP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE
       230       240       250       260        270       280      

              310    
pF1KB6 RNWGKSQKVESHTI
                     
XP_006 YV            
                     

>>NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-trans   (283 aa)
 initn: 966 init1: 966 opt: 977  Z-score: 703.2  bits: 138.1 E(85289): 2e-32
Smith-Waterman score: 1767; 95.3% identity (95.3% similar) in 279 aa overlap (1-279:1-266)

               10        20        30        40        50        60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
       ::::::::             :::::::::::::::::::::::::::::::::::::::
NP_001 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
                           130       140       150       160       

              190       200       210       220       230       240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
       170       180       190       200       210       220       

              250       260       270       280       290       300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
       :::::::::::::::::::::::::::::::::::::::                     
NP_001 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEKQEESAITSQPRSWKLT    
       230       240       250       260       270       280       

              310    
pF1KB6 RNWGKSQKVESHTI

>>NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans iso  (207 aa)
 initn: 769 init1: 769 opt: 769  Z-score: 560.1  bits: 111.2 E(85289): 1.9e-24
Smith-Waterman score: 769; 68.9% identity (88.7% similar) in 151 aa overlap (129-279:35-185)

      100       110       120       130       140       150        
pF1KB6 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
                                     :.: .... .:: ::.:.  ..:: ::. .
NP_005 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
           10        20        30        40        50        60    

      160       170       180       190       200       210        
pF1KB6 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
        :..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
NP_005 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
           70        80        90       100       110       120    

      220       230       240       250       260       270        
pF1KB6 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
       : :::: :::.:::.:::::.::::::::::.   :::::::::::::.: ::.::...:
NP_005 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
          130       140       150       160       170       180    

      280       290       300       310    
pF1KB6 EVAPDTKASKARGSRKNKDGQERNWGKSQKVESHTI
       :                                   
NP_005 ESFGSKSGRTSKKIVITDCGQLS             
          190       200                    




314 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:59:30 2016 done: Fri Nov  4 22:59:31 2016
 Total Scan time:  7.710 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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