Result of FASTA (omim) for pF1KB6734
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6734, 138 aa
  1>>>pF1KB6734 138 - 138 aa - 138 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0922+/-0.000304; mu= 12.1770+/- 0.019
 mean_var=68.8231+/-13.747, 0's: 0 Z-trim(118.4): 43  B-trim: 89 in 1/53
 Lambda= 0.154599
 statistics sampled from 31246 (31295) to 31246 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.367), width:  16
 Scan time:  4.220

The best scores are:                                      opt bits E(85289)
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
NP_000920 (OMIM: 228980,601192) calcium-dependent  ( 138) 1052 242.8 1.3e-64
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145)  473 113.7   1e-25
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144)  462 111.2 5.5e-25
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144)  462 111.2 5.5e-25
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144)  462 111.2 5.5e-25
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144)  462 111.2 5.5e-25
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211)  382 93.5 1.8e-19
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211)  382 93.5 1.8e-19
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165)  344 85.0 5.1e-17
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219)  309 77.2 1.4e-14
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148)  262 66.6 1.5e-11
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120)  249 63.7 9.6e-11
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124)  249 63.7 9.8e-11
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131)  249 63.7   1e-10
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133)  249 63.7   1e-10
NP_001258743 (OMIM: 605630) group IID secretory ph (  62)  202 53.0 8.1e-08
NP_001073868 (OMIM: 601658) otoconin-90 precursor  ( 477)  212 55.8 8.7e-08


>>XP_011539892 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>NP_000920 (OMIM: 228980,601192) calcium-dependent phos  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
NP_000 NLRSYNPQYQYFPNILCS
              130        

>>XP_005245950 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_005 NLRSYNPQYQYFPNILCS
              130        

>>XP_011539894 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>XP_011539890 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1281.0  bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
              130        

>>XP_005245948 (OMIM: 228980,601192) PREDICTED: calcium-  (169 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1279.7  bits: 242.9 E(85289): 1.5e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:32-169)

                                             10        20        30
pF1KB6                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                     ::::::::::::::::::::::::::::::
XP_005 EVRTKRPRIGTDTNRPFVEEEIQMAIRTPEMKGLLPLAWFLACSVPAVQGGLLDLKSMIE
              10        20        30        40        50        60 

               40        50        60        70        80        90
pF1KB6 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
              70        80        90       100       110       120 

              100       110       120       130        
pF1KB6 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
       ::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
             130       140       150       160         

>>XP_011539888 (OMIM: 228980,601192) PREDICTED: calcium-  (169 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1279.7  bits: 242.9 E(85289): 1.5e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:32-169)

                                             10        20        30
pF1KB6                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                     ::::::::::::::::::::::::::::::
XP_011 EVRTKRPRIGTDTNRPFVEEEIQMAIRTPEMKGLLPLAWFLACSVPAVQGGLLDLKSMIE
              10        20        30        40        50        60 

               40        50        60        70        80        90
pF1KB6 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
              70        80        90       100       110       120 

              100       110       120       130        
pF1KB6 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
       ::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
             130       140       150       160         




138 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:41:38 2016 done: Fri Nov  4 23:41:39 2016
 Total Scan time:  4.220 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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