GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:54:14

Sequence gi568815597r:201368406_201568786 : 200381 bp : 50.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4570   4644   75  0  0   46   44   136 0.203   4.10
 1.02 Intr +   9199   9328  130  0  1  124   93    67 0.863  11.07
 1.03 Term +   9877   9959   83  2  2   86   54    53 0.895  -0.44
 1.04 PlyA +  10981  10986    6                              -3.64

 2.12 PlyA -  11010  11005    6                               1.05
 2.11 Term -  13488  13483    6  0  0  122   48     0 0.514  -2.73
 2.10 Intr -  14334  14248   87  0  0   74   68    46 0.700   1.37
 2.09 Intr -  14839  14669  171  1  0   72  100   105 0.631  10.24
 2.08 Intr -  14984  14912   73  1  1   91   63    94 0.899   6.61
 2.07 Intr -  16430  16387   44  2  2  108   75    34 0.879   1.14
 2.06 Intr -  17400  17296  105  0  0  116   80   108 0.821  13.21
 2.05 Intr -  18773  17930  844  1  1   83   52   551 0.537  42.38
 2.04 Intr -  20898  20755  144  2  0  126   92   207 0.996  24.30
 2.03 Intr -  28951  28823  129  0  0   61   68    84 0.796   3.51
 2.02 Intr -  29739  29620  120  2  0   54  121    22 0.279   1.71
 2.01 Init -  30901  30864   38  1  2   86   99    46 0.446   5.30
 2.00 Prom -  34225  34186   40                              -4.16

 3.13 PlyA -  36112  36107    6                               1.05
 3.12 Term -  42030  41923  108  0  0   81   44   150 0.996   8.41
 3.11 Intr -  43128  42952  177  0  0   80  100   269 0.999  27.42
 3.10 Intr -  44716  44627   90  1  0   91  105   179 0.999  20.09
 3.09 Intr -  46244  46113  132  2  0   41   71   264 0.994  20.84
 3.08 Intr -  46849  46808   42  1  0  128  100    22 0.980   5.84
 3.07 Intr -  53321  53268   54  2  0   82  121    46 0.941   6.48
 3.06 Intr -  62695  62546  150  1  0   78   86    76 0.697   6.76
 3.05 Intr -  73877  73852   26  0  2   73   77     5 0.006  -4.36
 3.04 Intr -  79842  79691  152  2  2   61   71    86 0.465   4.01
 3.03 Intr -  80476  80292  185  1  2   72   25    98 0.430   0.49
 3.02 Intr -  87019  86948   72  1  0   86   85    40 0.671   3.10
 3.01 Init -  91037  90984   54  2  0   89  100    42 0.884   6.78
 3.00 Prom -  96005  95966   40                              -7.86

 4.11 PlyA -  96122  96117    6                               1.05
 4.10 Term - 100412  99998  415  1  1   16   40   869 0.683  69.63
 4.09 Intr - 101591 101419  173  2  2   78   47   109 0.090   4.54
 4.08 Intr - 111965 111917   49  1  1   78   81    53 0.155   2.28
 4.07 Intr - 116384 116312   73  0  1  117   33    64 0.324   2.26
 4.06 Intr - 116971 116878   94  1  1   75   98   107 0.998   9.94
 4.05 Intr - 120579 120450  130  2  1  106  116   154 0.993  20.70
 4.04 Intr - 121939 121771  169  2  1  103   64   364 0.667  34.50
 4.03 Intr - 127899 127787  113  2  2  117   73    82 0.615   9.62
 4.02 Intr - 138496 138219  278  1  2  -12   64   233 0.424   7.21
 4.01 Init - 138826 138665  162  1  0   87  109   124 0.636  14.07
 4.00 Prom - 141165 141126   40                              -4.46

 5.00 Prom + 142756 142795   40                              -5.46
 5.01 Init + 151711 151854  144  0  0   89   42   229 0.157  18.52
 5.02 Term + 164339 164506  168  1  0  117   47    60 0.227   2.68
 5.03 PlyA + 165171 165176    6                               1.05

 6.08 PlyA - 168587 168582    6                               1.05
 6.07 Term - 170018 169963   56  0  2  112   55    26 0.132  -0.58
 6.06 Intr - 171021 170863  159  1  0   89   49   138 0.150   9.96
 6.05 Intr - 191178 190946  233  2  2   68   49   108 0.385   2.32
 6.04 Intr - 191604 191311  294  2  0   80  -25   206 0.604   4.62
 6.03 Intr - 194550 194466   85  1  1   76   57    74 0.830   1.98
 6.02 Intr - 198994 198838  157  1  1   14   35   140 0.390   0.88
 6.01 Init - 199338 199240   99  0  0   73   74    60 0.412   3.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 170880 170937   58  2  1   44  117   114 0.823   9.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_1|95_aa
MTLELNLCASRSLSACALPGIYNPGSPARALPQNSSCRQILEASAQSQRGLGEAEDGEGF
KQACGLGPGNGLKLLQEARYKVELPVKNLEQALVV

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_1|288_bp
atgaccctggagctgaacctctgtgcttcccgaagtctctcggcctgtgctctgcctggg
atctacaacccagggagccctgcccgagccttacctcagaacagcagctgccgacagatc
ctggaggcgtctgctcagtctcagcggggactgggtgaggcagaggatggagagggcttt
aagcaggcatgtgggctggggcctgggaatggactgaaactgctacaggaggccagatac
aaggtagaacttccagtcaagaaccttgaacaggcgctcgttgtgtga

>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_2|586_aa
MAVSRKDWSALSRLSLSIAAHRLGLGGHLPRPSRPHSALKHCGQPMGSREGKSPHRALWA
DAAAANSHPDEAPGTEDRSRSAPWVNKPQRAGRKGLLARQRTLEDEEEQERERRRRHRNL
SSTTDDEAPRLSQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQ
RRQVVEAAQAPIQERLEAEEGRNSLSPVQATQKPLVSKKELEIPPRRRLSREQRGPWALE
EESLVGREPEERKKGVPEKSPVLEKSSMPKKTAPEKSLVSDKTSISEKVLASEKTSLSEK
IAVSEKRNSSEKKSVLEKTSVSEKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADA
KPAPKRATASEQPLAQEPPASGGSPATTKEQRGRALPGKNLPSLAKQGASDPPTVASRLP
PVTLQVKIPSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPKKENSETTLTRSASMKL
PDNTVKLGEKLERYHTAIRHGSAVGVLGSQRSESVKSRGLPCTELFVAPVGVASKRHLFE
KELAGQSRAEPASSRKENLRLSGVVTSRLNLWISRTQESGDQDPQV

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_2|1761_bp
atggctgtcagcaggaaggactggtccgcgctgtccaggcttagcctctccatagcagct
catcgcctgggactggggggccacctccccagaccctcaagacctcacagtgctctgaag
cactgtgggcagcccatgggctctagagaggggaaaagccctcatagagccctgtgggca
gacgcagctgctgccaacagtcaccctgatgaggcacctggaacagaggaccgctcccgc
tccgctccctgggtgaacaagcctcagcgggcaggcaggaaagggctccttgcccggcag
aggactctggaggatgaggaggaacaggagcgcgagcgcaggcggcggcaccgcaacctg
agctccaccacggacgatgaggctcccaggctcagccagaatggagaccggcaggcctct
gcttctgagagactaccgagcgtggaagaagcagaggtgcccaagccactgcccccagcc
tccaaagatgaggacgaggacatccagagcatcctcagaacacggcaggagcggaggcag
aggcggcaggtggtggaggctgcacaggcccccatccaggagaggctggaggcagaggag
gggaggaacagcttgagccctgtgcaggccacacagaaacccctagtctccaagaaggaa
ctggaaatcccacctcgccggagactgagtcgggaacagcggggcccctgggccctggag
gaggagagcttggtgggcagggagccagaagagaggaagaaaggggttccagaaaagtcc
ccagtcttggagaagtcctccatgccaaagaagacggcacctgaaaagagcctggtctcc
gataaaacctccatctctgagaaggtgctggcctcagagaagacatctctatcagagaag
atagcagtgtcagagaaaagaaacagctcagagaagaagtctgttctagaaaaaaccagt
gtctctgagaagtcgctggccccagggatggcactgggctcaggaaggaggctggtgtct
gagaaagcttccatctttgagaaggcactggcctcagagaagagcccaactgcagatgct
aagccggccccaaagagggccacagcctcagagcagcccctggcgcaggagccgccagcc
tctgggggaagcccagccaccaccaaggagcagagaggaagggccctccctgggaagaac
ctgccctctttggcaaagcagggggcttcagaccctccgactgtggcctcccgcctccca
cccgtcacactccaggtgaaaatccccagcaaggaggaagaggcagatatgtcctcaccc
acacagcgaacctacagcagctccctcaaacgctccagccccaggaccatctcctttcgg
atgaaacccaagaaagaaaactcggaaacaaccctaactcgcagtgccagcatgaagctc
ccagacaacacagtgaagttgggagagaagctggagagataccacacggccatacggcat
gggtcagctgttggtgttcttggttcccagagatcagaatctgtcaagtctcggggtctg
ccttgcactgagttattcgtggctcctgtgggtgtagccagcaagcgccacctctttgag
aaggaactggcgggccagagccgagcagaaccagcctccagccggaaggagaacttgagg
ctctcaggggttgtgacatcaaggctcaacctgtggatcagcaggacccaggaatctgga
gatcaggacccccaggtgtga

>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_3|413_aa
MAFQVEEITCAKVPGPEKVDVSWAPGSSWDTSDEWSREEIRQGINAKDDYPYFTDEKTGS
KRRKALPEATQGVRGSASIHSSSGSGDGVCVVNLFERPEGRLKACLPELLKEQSDSIPQD
DSSDPSSPLPKLFPGSLGGGGEKDYERRDGTTQAEVGPHYDAQAGHRVEGVVIVQGDLPG
PKFNNNKGPVPSCCFYVCPSTLLEGEQFITYVKSAVYGEAQASPAPRGLNKRKPKITASR
KLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKVE
VVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKHKV
SMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTSQ

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_3|1242_bp
atggcgttccaggtggaagaaatcacatgtgcaaaggtgccaggaccagagaaggtggat
gtgagctgggctcctgggagctcctgggacacttcagatgagtggagccgggaagaaatc
cggcagggtataaatgcaaaagatgattacccctattttacagatgagaaaacaggttca
aagagaaggaaggctttacctgaggccacccagggagtaagaggaagtgccagcattcac
agcagctctgggagtggggatggagtatgtgtggtgaatttattcgagaggcccgaaggc
cgtctgaaagcatgtctgcctgagctgcttaaggagcagtcagattccatcccacaggat
gactcgtctgaccccagctccccactccctaaactgttcccagggtccctgggtgggggc
ggagagaaagattatgagaggcgagatggcacaacacaggcagaggtgggacctcactat
gatgcccaggctgggcacagggtggagggggtggtcatagttcagggtgacctcccaggg
cctaagtttaacaacaacaaaggcccagtgcccagctgttgtttctatgtgtgtccgagc
acattgttggagggcgagcagttcatcacctatgtcaagtctgcagtctacggcgaggca
caggccagcccagctccacgaggactgaacaagagaaaacccaagatcactgcctcccgc
aaactcttgctgaagagcctgatgctggccaaggccaaggaatgctgggagcaggagcac
gaggagcgcgaggctgagaaggtgcgctacctggcagagcgcatccccacgctgcagacc
cgtggcctgtccctcagtgccctgcaggacctgtgccgggagctgcacgccaaggtggag
gtggtggatgaggagcgatacgacattgaggccaaatgcctccacaacaccagggagatt
aaggacctgaagctgaaggtgatggacctccgtgggaagttcaagcgcccgcccctgcgt
cgagtccgtgtctcggctgacgccatgctccgggccctgctgggctccaagcacaaggtg
tccatggatctgcgggccaacctcaagtctgtgaagaaggaagacacagagaaggagcgg
cctgtggaggtgggtgactggaggaagaacgtggaggccatgtctggcatggaaggccgg
aagaagatgtttgatgccgccaagtctccgacctcacaatag

>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_4|551_aa
MTSALEWCSVQSPLVGVARDTPSAERNKTARRPGAPSRHFRERLPPLRRRASCQALGPSP
SRAFLGFLDTVDFRVCVTQGDPAPRNRLQVGQNNRRFCAPLTLIVWQRDEGIRATPSLTL
LLGRKCPRAGWGKHLGLTLDICVPERRMPNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKS
CFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHE
EAPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGL
ESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGAGALVHSEDPLAFQRFLMEAPGSPLCMR
EKSILGEGRGRTESAERKEQGWSCAYTWDWLCHRSSVGACKCAVERTADSGIPSLELSAN
LGAPMTAAATATVLKEGVLEKRSGGLLQLWKRKRCVLTERGLQLFEAKGTGGRPKELSFA
RIKAVECVESTGRHIYFTLVTEGGGEIDFRCPLEDPGWNAQITLGLVKFKNQQAIQTVRA
RQSLGTGTLVS

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_4|1656_bp
atgacatcagccctggagtggtgcagtgtgcaaagcccactggttggcgtggcccgggac
acgccttccgcggagcggaacaaaacggcgcgcaggccgggcgcacccagccgccacttc
cgagagcgcctgccgcccctgcgccgccgagccagctgccaggcactaggtccgtcccca
tcccgggccttcctgggcttcctggacacagttgacttccgcgtgtgcgtgacccagggc
gacccggctccccgcaaccgcctgcaagtcgggcagaacaatcggcgattctgcgcgcca
ctgacgctcattgtatggcagagagatgagggcatccgtgccaccccctccctcaccctc
ctgctggggagaaaatgcccgcgggcggggtggggcaaacatctgggcctgaccttggac
atctgtgtccctgagcgcagaatgccgaactggggaggaggcaagaaatgtggggtgtgt
cagaagacggtttactttgccgaagaggttcagtgcgaaggcaacagcttccataaatcc
tgcttcctgtgcatggtctgcaagaagaatctggacagtaccactgtggccgtgcatggt
gaggagatttactgcaagtcctgctacggcaagaagtatgggcccaaaggctatggctac
gggcagggcgcaggcaccctcagcactgacaagggggagtcgctgggtatcaagcacgag
gaagcccctggccacaggcccaccaccaaccccaatgcatccaaatttgcccagaagatt
ggtggctccgagcgctgcccccgatgcagccaggcagtctatgctgcggagaaggtgatt
ggtgctgggaagtcctggcataaggcctgctttcgatgtgccaagtgtggcaaaggcctt
gagtcaaccaccctggcagacaaggatggcgagatttactgcaaaggatgttatgctaaa
aacttcgggcccaagggctttggttttgggcaaggagctggggccttggtccactctgaa
gatcccctggcctttcagcgcttcctgatggaggcaccagggagcccactctgtatgcgg
gagaagtccattcttggggaaggccgagggaggacagaatctgcggagcggaaggagcaa
ggttggagctgcgcttacacctgggactggctgtgccatcggtccagcgtcggcgcctgc
aagtgtgcggtggagaggactgcagacagtggcatccccagcctggagctttccgcgaac
ctcggggcgcccatgacggcggcggcgacggctaccgtgctcaaggagggcgtgctggag
aagcgcagcggcgggctgctgcagctgtggaagcggaagcgctgcgtcctcaccgaacgc
gggctgcagctcttcgaggccaagggcacgggcggccggcccaaggagctcagcttcgcc
cgcatcaaggccgtggagtgcgtggagagcaccgggcgccacatctacttcacgctggtg
accgaagggggcggcgagatcgacttccgctgccccctggaagatcccggctggaacgcc
cagatcaccctaggcctggtcaagttcaagaaccagcaggccatccagacagtgcgggcc
cggcagagcctcgggaccgggaccctcgtgtcctaa

>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_5|103_aa
MVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKEVCLETFLLGITCLPPPHPFL
TTAGFTSTAFTSSRIWQFILFQLLSSSPTLTKVDIAASKSERS

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_5|312_bp
atggtggccaagaaggatgtccacatgcctaagcacccggagctggcagacaagaatgcg
cccaaccttcgtgtcatgaaggccatgcagtctctcaagtcccgaggctacgtgaaggaa
gtttgcctggagacatttctactgggaatcacctgcctacctccacctcatccatttctc
accacagctggattcacctctacagcctttacctccagtcgtatttggcaattcatcctt
ttccagctcctatcatcctcccctaccctcaccaaagtggacatcgcagcctctaaatct
gaacggagctga

>gi568815597r:201368406_201568786|GENSCAN_predicted_peptide_6|360_aa
MSVLLERQSPPSSTKQRQVDPGHTGLEQRPQGTWPSSYSAGSNPGNLTGQGPSGPANALV
PVDSPIRKNNRGNPLNQQKPVPHEEGCYHPYFSEKETDAQTDPVIQQHPGSGLSAGLPQP
EPLTPTFFQSEKEGTRACGTCFLSPQDAELRAACIGEEGVGIGLGSAGQLHPLVAATGRC
KAMQTKAEPDSSSFPESLYTAFIKHLLADGTGFSDQCFNGQFCCPLPTCMAPRPSSRTKL
LTSIKTLLPVVTLRTLSLPQPTRDLKAATVGRALFLVVYVRVSSVRSSKGPASQASQNGK
RQTLSAATARPPRAGHSPERLPARAPGPRRSRAESRIPKGSAGTWEWEEGEEEERGNDRT

>gi568815597r:201368406_201568786|GENSCAN_predicted_CDS_6|1083_bp
atgtctgtgctgttggagagacagtctccaccttcctccacaaagcagcggcaggtagac
cctggccacactggattggaacagagaccccagggcacttggcccagctcctacagcgcg
ggctccaaccccggtaacttgacaggacaaggcccctctggcccagccaatgccctcgta
cctgtggacagccccatcagaaaaaacaacagaggcaaccccctgaaccaacagaagcct
gttccccatgaagagggctgttatcatccctacttttcagaaaaggaaactgatgctcag
acagatcccgtgatccaacagcatccaggatctggactgagtgcaggactgccccagcct
gagcctctcaccccaactttcttccagtctgagaaggaggggacacgtgcctgtgggacc
tgcttccttagcccacaagatgcagagctgcgagctgcctgcataggagaggagggcgtg
gggatcgggctgggttctgctgggcaactgcaccctctggtggcggcaacaggaagatgc
aaggccatgcagacaaaggccgaaccagattcttcctccttcccagaatccctctacacc
gcctttattaagcacctattggcggatggcacgggcttcagcgatcagtgcttcaatgga
caattttgctgccctctgcccacatgcatggcacctcgaccatcatctcggacaaagctt
ctcacctccatcaaaaccctgctcccagtcgtaactctaaggaccctcagcctcccccaa
cctacaagagacttaaaagcagcaactgttggaagagcactgttcctggtggtttatgtg
cgagtctccagtgtcagatcctccaagggacctgccagccaagcctcgcaaaacgggaag
cgccagaccctcagcgccgcgaccgcgcgaccgccccgcgccggccactcaccggagcgc
ctgcccgcccgggctccgggtccgcgccgcagccgcgcagagtcgcgcatccccaagggc
agcgcggggacttgggagtgggaggagggggaagaagaggagagaggaaatgacaggacc
tga