GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:56:23

Sequence gi568815596r:231632955_231881114 : 248160 bp : 48.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  20474  20513   40                              -2.86
 1.01 Init +  22739  22924  186  1  0  108   25    87 0.106   1.53
 1.02 Intr +  29783  29969  187  1  1   88   57    84 0.223   4.56
 1.03 Term +  32676  32905  230  1  2   49   43   159 0.157   4.29
 1.04 PlyA +  32965  32970    6                               1.05

 2.05 PlyA -  34802  34797    6                               1.05
 2.04 Term -  43092  43052   41  1  2   94   48    52 0.186  -0.85
 2.03 Intr -  53273  53138  136  2  1   58   90    85 0.493   5.84
 2.02 Intr -  60010  59819  192  1  0   90   32   106 0.344   4.89
 2.01 Init -  66925  66770  156  1  0   42   70   135 0.836   7.01
 2.00 Prom -  67769  67730   40                              -8.76

 3.00 Prom +  75537  75576   40                              -8.56
 3.01 Init +  76573  76661   89  0  2   98   54   176 0.994  13.31
 3.02 Intr +  76887  77110  224  0  2   92   57    80 0.619   3.07
 3.03 Intr +  77231  77394  164  0  2   33   74    77 0.833   0.49
 3.04 Intr +  78394  78465   72  0  0   61   68   105 0.696   5.40
 3.05 Intr +  78933  79029   97  2  1   52  101   176 0.975  14.88
 3.06 Intr +  79489  79562   74  2  2   77   90   137 0.999  11.93
 3.07 Term +  79850  79897   48  1  0   65   42   156 0.985   6.00
 3.08 PlyA +  80548  80553    6                               1.05

 4.07 PlyA -  80566  80561    6                               1.05
 4.06 Term -  81700  81647   54  1  0   65   43    79 0.176  -1.34
 4.05 Intr -  84226  84104  123  1  0    2   61   110 0.112   0.48
 4.04 Intr -  93509  93347  163  1  1   99   51    74 0.439   4.78
 4.03 Intr - 104338 104233  106  2  1  129   92    97 0.733  13.47
 4.02 Intr - 105184 105059  126  2  0   70   61    59 0.753   2.05
 4.01 Init - 106227 106146   82  0  1    5   75    57 0.306  -2.77
 4.00 Prom - 106959 106920   40                              -5.46

 5.00 Prom + 114477 114516   40                              -5.06
 5.01 Init + 115237 115356  120  0  0   53   57   118 0.714   5.39
 5.02 Intr + 146390 146410   21  1  0  104  100     0 0.317   0.54
 5.03 Term + 148348 148485  138  0  0  135   48    70 0.519   5.66
 5.04 PlyA + 151373 151378    6                               1.05

 6.00 Prom + 155497 155536   40                              -4.86
 6.01 Init + 155617 155778  162  0  0   51   94    88 0.837   5.43
 6.02 Intr + 158779 158854   76  0  1  108   95    45 0.857   6.29
 6.03 Intr + 161309 161397   89  0  2  -37  102   122 0.817   0.79
 6.04 Intr + 163023 163354  332  2  2   93   77   426 0.686  36.43
 6.05 Intr + 165905 166010  106  2  1   82   94   169 0.947  17.12
 6.06 Intr + 170065 170280  216  0  0  105   47    44 0.406   0.70
 6.07 Term + 174533 174691  159  1  0   90   49   171 0.839  11.34
 6.08 PlyA + 175947 175952    6                               1.05

 7.03 PlyA - 176757 176752    6                               1.05
 7.02 Term - 177893 177584  310  1  1   31   36   283 0.115  11.93
 7.01 Init - 189503 189373  131  2  2   82   64    91 0.738   5.72
 7.00 Prom - 233095 233056   40                              -2.56

 8.02 PlyA - 234678 234673    6                               1.05
 8.01 Term - 245148 244979  170  1  2   58   48   174 0.551   8.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_1|200_aa
MMARGSVAPRLALVGWPTAIPCLGVSAHSWQDAAAHCVSAHGWQDAAVHWNDPERELSAF
IKNPGACAFLYVHNLGSVRIPLLTLPSTHTKTLACTNPRVSMFSYVHDLEDVLGPENVRI
CVCTGPRTWVMSFSVNGPLLQHKAPEAAPHPTPLLSRRPELPPLNATLGKGSVPGKHLVG
NALASRINNGDLDDATVLSL

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_1|603_bp
atgatggcacggggctctgtagccccaaggctagcacttgtgggctggcctacagcaatc
ccctgcctgggcgtctctgcacatagctggcaggatgctgctgcccactgcgtctctgca
catggctggcaggatgctgctgtccactggaatgatccagaacgagagctctcagctttc
ataaagaaccctggggcgtgcgcctttctgtatgtgcacaacctcggaagtgtgcgcata
cccttgcttacactccctagcacgcacaccaaaactctggcatgcacgaacccgcgggtt
tccatgttttcgtatgtgcacgacctcgaggatgtacttggacccgagaatgtccgcatt
tgtgtttgcacaggccccaggacttgggtgatgtccttctccgtcaacggtcctctcctt
cagcacaaggctccagaggcagctccccatcccaccccactcctgagcaggcggccggag
ctgccccctctgaatgccacgctgggcaaggggtccgtgcctgggaaacacctggtgggc
aatgctctggcctcaagaataaacaacggggatctagatgatgccaccgtcctcagtctc
tga

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_2|174_aa
MQHHPEVKPHQGGEGKVGAFPGKLESHAHVKSEGKAASQHLDRELPKLSSASQARSTLPR
PVSRCACTCLYNHEHGSHVLNVATDVCMRVQMRACAHDTTNRSTTLSPPRGRGTKQGPVW
QQLRLQAHPDSPFQDPAVPMLRQLRCSCAINASSVAWEGGPAAIAERLLCMLLG

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_2|525_bp
atgcagcatcacccagaagtgaagcctcatcagggaggggaaggcaaggtgggcgccttt
ccaggaaagctcgagtcccatgcacatgtgaagtccgaggggaaagctgccagtcagcac
ctggaccgagagcttcccaagctgtcctcagcctcacaggcccgttccacactcccacgc
ccagtctctcggtgtgcatgtacatgtctgtacaaccatgaacacggatcccatgtcctg
aatgtggccacagatgtgtgcatgcgtgtgcagatgcgagcatgtgcccatgataccacc
aaccgttcaaccaccctttcccctcctaggggccggggcaccaagcaggggcctgtttgg
cagcagctcaggctgcaggctcatcccgactcccccttccaagacccagcagtgcccatg
ctgcgccagctgcggtgctcttgtgccatcaatgcctcctctgtggcctgggagggtggg
ccggctgcaattgcggagcgcctgctgtgcatgcttctggggtaa

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_3|255_aa
MGAPRGCPGAPCAPQLGATRANTAAATGQWDWRESPWRLLNPCVPGVISDSPRGDFLAER
SSGPGSPQGLSVTPSGLSPGMSLWGENTVPSAGPGCSIFSEAPKDIRACRGGGSGASSRE
PGRPTRDPRACHCKLCLPAGSLQGKGRTRRPRATCSLRADLKEKKEVVEEAENGRDAPAN
GNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDE
DDDVDTKKQKTDEDD

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_3|768_bp
atgggcgccccccgcggctgcccgggagcaccgtgtgcgccgcagctcggggcgacgcgg
gccaacacggcggccgcgacaggccaatgggattggcgcgagtcaccttggcgtctcctt
aacccttgtgtccctggcgtcatctctgactctcccaggggcgacttcttggcagagcgg
agctcggggcccggatctccacaggggctctcagtgaccccttctggactcagtccggga
atgagtttgtggggtgagaacaccgtccccagtgcggggcctggctgttcgattttctcc
gaagcaccaaaagacattcgggcctgccggggtggcggcagtggggcgtcgagtcgagag
cccggccgaccgacgcgcgacccgcgcgcgtgccactgcaagctctgcctgccggccggg
agtctccaaggcaagggacgcactcggcggccccgggccacgtgctccctgcgcgcggac
ttaaaggagaagaaggaagttgtggaagaggcagaaaatggaagagacgcccctgctaac
gggaatgctgagaatgaggaaaatggggagcaggaggctgacaatgaggtagacgaagaa
gaggaagaaggtggggaggaagaggaggaggaagaagaaggtgatggtgaggaagaggat
ggagatgaagatgaggaagctgagtcagctacgggcaagcgggcagctgaagatgatgag
gatgacgatgtcgataccaagaagcagaagaccgacgaggatgactag

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_4|217_aa
MNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQK
VYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTPVDPSPLTSLHKHLV
RVLAIPTGPTSGPVTISGLQHGPPFLTYPPHHSQKEQAKKKKLDIASGHYCQEKGEGMAA
GGKNNRCPLGPYGIHQQLLSLPGDMLNKRPEQPHESD

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_4|654_bp
atgaaccttcgggatgctgagacagggaagatactctggcaaggaacagaagacctgtct
gtccctggtgtggagcatgaagcccgtgttcccaagaaaatcctcaagtgcaaggcagtg
tctcgagaacttaatttttcttcgacagaacaaatggaaaaattccgcctggaacaaaaa
gtttacttcaaagggcaatgcctagaagaatggttcttcgagtttggctttgtgatccct
aactccacaaatacctggcagtccttgatagaggcagcacccgagtcccagatgatgcca
gcaagcgtcttaaccccagtagaccctagcccgttgacctcacttcataaacatcttgtt
cgggtcctcgccatccccacgggccccacctcaggtcctgtaaccatctcaggactgcag
cacgggcctcccttcctgacttaccctccacatcacagccagaaagaacaagctaagaaa
aaaaagctggacattgcttcagggcattactgccaagaaaagggtgaaggaatggctgct
ggtggcaaaaacaatagatgtcccctgggaccttatggaatccaccagcagctcctttca
ctgcctggggacatgctgaacaagcggcctgagcagccccatgagagtgactaa

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_5|92_aa
MWESLELPRDLLNGFAQNADSNMDNKIQMEMRNLFGTGAKVQELRLKPRSALLEPMESQP
WRLASQPASRSAQRLRRGTVNVNGKGPPREVP

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_5|279_bp
atgtgggaaagtttggaacttcctagagacttgttgaatggctttgcccaaaatgctgat
agcaatatggacaataaaattcagatggagatgaggaacttgttcggcactggagcaaag
gttcaagagctaagactgaagcctcgcagtgccctcctggaaccaatggaaagccagcct
tggcgattggcatctcaaccagccagtaggagcgcgcagcggcttcgcagggggactgtt
aacgtcaatgggaagggccctccccgggaagtcccatag

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_6|379_aa
MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGAN
AAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKLLIITTSLRFP
SLEAAVGYGSNTCIFANACQMVFIMITWPYLQCIPYSVLLKDLEMRNLRELEDLIIEAVY
TDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQ
YKENHNRTQQQVEAEDVYILPQSGNDCRGLRFVSSLIGGVRCVHLKHKGDAVVWEAIEEG
EALPGKYRLKGGRSVWAAAVRAVCMDQVTNIKKTLKATASSSAQEMEQQLAERECPPHAE
QRQPTKKMSKVKGLVSSRH

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_6|1140_bp
atggcaggggaacagaaaccctcaagtaatctcctggagcagtttattttactagccaaa
ggtaccagtggctcagccctcactgctctcataagccaggtcttagaggctcccggagtg
tatgtctttggagaacttctggagctggccaacgtgcaggagcttgcggaaggagctaat
gctgcttatttgcagttgttgaacctgtttgcctatgggacatacccagattacatagcc
aacaaggagagcctgccagaactgagcacagctcagcagaacaagctgaagcatcttacc
atcgtgagcttggcatcaagaatgaagctattaataattaccactagcctgcgtttcccg
agcctagaggcagctgttggctatgggagtaatacctgcattttcgctaatgcttgccag
atggtttttataatgatcacatggccttatctacagtgtatcccctactccgtgttgctg
aaagacctggagatgcggaatctccgggaactagaagaccttatcattgaggctgtctac
actgacatcatccagggcaagctggaccagcgaaaccagctgctggaagtggatttctgc
attggccgtgacatccgaaagaaggatatcaataatattgtcaagaccctgcatgaatgg
tgtgatggctgtgaagcagttctactgggcatcgagcagcaagttctgagagccaaccag
tacaaagagaaccacaaccgaactcagcagcaggtagaagcagaggatgtttacattttg
cctcaaagtggtaacgactgtagaggacttagatttgtcagcagtcttattggaggagtg
aggtgtgtgcatctgaaacacaaaggagatgcagtggtgtgggaggccatcgaagaggga
gaggcactgccaggcaagtacagattgaagggtggcagatcagtgtgggctgcagcagtc
agggcagtttgtatggaccaggttaccaacatcaagaagacactcaaagccaccgcatcc
tcctcggctcaggagatggagcagcagctggctgaacgggagtgtccccctcacgctgag
cagaggcagcccaccaagaagatgtccaaagtgaaaggtctggtctccagccgccactag

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_7|146_aa
MRYVQGGMAEDYTPIKWLKSKTVITPNAGKMWRNWIIPTQLMEIKSAPTATPFAAFTTSK
GGRVLEVGFGMATRIWKVQEVAIQEHWIMECNDSIFQLLQDWTQQQPHKVIPLKVLWKEV
ALPCQVVALMGSCMTRTHCRRRPGTH

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_7|441_bp
atgcggtatgttcagggtggtatggctgaagactacacacctatcaaatggctaaaatct
aaaacagtgataacacccaatgctggcaagatgtggagaaactggatcattcctacacag
ctgatggaaatcaagagcgcccctactgcaacccccttcgctgccttcaccacctccaaa
gggggccgagtcttagaggtgggcttcggcatggccacaagaatatggaaggtgcaggag
gtcgccatccaggaacactggatcatggagtgcaatgacagcatcttccagctgctccag
gactggacccagcagcagccacacaaggtcatccccttgaaagtcctgtggaaggaggtg
gcgctcccctgccaggtggtcgctttgatgggatcctgtatgacgcgtacccactgtaga
aggagacctggcacacactag

>gi568815596r:231632955_231881114|GENSCAN_predicted_peptide_8|56_aa
XEENALEKAFAFTLVQSEKALSTSEWKTPTFRGLEQVSAGILRTGFVPVSGQLPKH

>gi568815596r:231632955_231881114|GENSCAN_predicted_CDS_8|171_bp
ncagaagaaaatgctctagagaaagcttttgccttcacgctggtacagagtgagaaagca
ctgtcaacatctgagtggaaaaccccaacattccgcggcctcgagcaggtctctgctgga
atcctgaggacaggctttgttcctgtgtctggccagctgcccaaacactga