GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:47:59

Sequence gi568815588r:70783953_70985930 : 201978 bp : 46.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -    383    378    6                               1.05
 1.08 Term -   2664   2531  134  1  2  117   29    57 0.388   0.95
 1.07 Intr -   2936   2815  122  1  2   86   43    91 0.412   4.54
 1.06 Intr -   8196   8084  113  0  2    0   93    81 0.302  -1.02
 1.05 Intr -   8775   8696   80  1  2   25   32   112 0.205  -1.43
 1.04 Intr -  10615  10235  381  2  0   51   75   287 0.066  18.58
 1.03 Intr -  20341  20262   80  0  2   78   93    41 0.545   2.79
 1.02 Intr -  27473  27395   79  0  1  100   89    25 0.190   2.41
 1.01 Init -  31997  31724  274  2  1   79   18   240 0.021  11.24
 1.00 Prom -  33425  33386   40                              -8.76

 2.00 Prom +  34518  34557   40                              -4.06
 2.01 Init +  44999  45055   57  1  0   49  110    48 0.681   4.41
 2.02 Intr +  60521  60686  166  1  1   83   89   107 0.796   9.83
 2.03 Intr +  67191  67258   68  1  2   63  115    21 0.230   0.92
 2.04 Intr +  67840  67908   69  0  0   84   96    30 0.659   2.78
 2.05 Intr +  70756  70903  148  0  1   17   51   158 0.707   4.81
 2.06 Intr +  73662  73738   77  1  2  110  113    36 0.879   7.53
 2.07 Intr +  75419  75547  129  1  0   94   75    57 0.746   5.89
 2.08 Intr +  84393  84481   89  2  2   81   48    82 0.674   2.27
 2.09 Intr +  85840  85945  106  1  1   76  100    71 0.648   7.32
 2.10 Intr +  87096  87194   99  2  0   58   71    64 0.556   2.01
 2.11 Intr +  87840  88034  195  2  0   52  105   129 0.853  10.61
 2.12 Intr +  89399  89637  239  1  2   99   36   227 0.973  15.01
 2.13 Intr +  91450  91596  147  1  0   70  115    87 0.997   8.95
 2.14 Intr +  92589  92709  121  0  1   98   54    54 0.990   3.50
 2.15 Term +  93243  93383  141  2  0  101   43   148 0.990   9.53
 2.16 PlyA +  97203  97208    6                               1.05

 3.05 PlyA -  97218  97213    6                               1.05
 3.04 Term - 100096  99998   99  1  0   55   41   150 0.952   5.13
 3.03 Intr - 101280 101200   81  0  0   51  113    90 0.991   7.63
 3.02 Intr - 101977 101846  132  1  0  125   51   109 0.997  11.74
 3.01 Init - 104581 104519   63  1  0   99   59    53 0.605   3.23
 3.00 Prom - 105442 105403   40                              -3.26

 4.04 PlyA - 105672 105667    6                               1.05
 4.03 Term - 107501 107282  220  1  1   77   42   163 0.772   7.11
 4.02 Intr - 109882 109747  136  2  1   70   49    68 0.306   0.73
 4.01 Init - 110472 110424   49  0  1   68   78    28 0.316   1.06
 4.00 Prom - 111839 111800   40                              -6.66

 5.00 Prom + 120414 120453   40                              -4.76
 5.01 Init + 131542 131595   54  0  0  103  105    58 0.832   8.30
 5.02 Intr + 132794 132893  100  1  1   85   77    29 0.642   1.18
 5.03 Intr + 135262 135332   71  2  2  123   45    54 0.443   3.50
 5.04 Intr + 138111 138289  179  2  2   44   97   131 0.389   8.32
 5.05 Intr + 142051 142132   82  1  1   49   -1    72 0.203  -5.96
 5.06 Intr + 142494 142604  111  2  0   87   59   109 0.571   8.48
 5.07 Intr + 143174 143266   93  1  0  100  109    38 0.974   7.26
 5.08 Intr + 143817 143854   38  2  2   63  108    27 0.706  -0.74
 5.09 Intr + 144852 144929   78  0  0  113   55    43 0.526   2.17
 5.10 Intr + 147892 148029  138  1  0   22   59   127 0.310   2.78
 5.11 Term + 148275 148314   40  0  1   69   55    38 0.176  -4.74
 5.12 PlyA + 148596 148601    6                              -0.45

 6.09 PlyA - 152690 152685    6                               1.05
 6.08 Term - 154086 154007   80  1  2   70   45    63 0.352  -1.87
 6.07 Intr - 154826 154628  199  2  1  113   68    90 0.900   8.42
 6.06 Intr - 160505 160406  100  1  1   32   77    96 0.859   3.01
 6.05 Intr - 162633 162500  134  0  2  122   85   146 0.990  17.14
 6.04 Intr - 164516 164447   70  1  1  118   14    21 0.076  -3.12
 6.03 Intr - 172693 172563  131  1  2   99   68   107 0.174   9.29
 6.02 Intr - 182976 182924   53  1  2  116   68    58 0.037   5.23
 6.01 Intr - 193713 193643   71  2  2   83   94    83 0.013   7.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_1|420_aa
MAPGAPARLPDPGVRGPAATSRAHAQTRAPRPVRAAYRPGSGLHPDPPVNVSTRPSWGGC
GIPTVTNFSSKLPWTKNFLVTFGHLEPPERVGHARPLQGLSESYRSTVFLQVLLLVDHWV
AFLNAGLDQSIPVSSRAVSPGQMTAVKKPDVLSPVRASKMTKKRNNGLTKKGHSHVQPIC
CMNCARCMPKDKAIKKFVIRNIVEPAAVRDIFEARVFNAYVLSKQYMKLHYCVSCAIHSK
VVRNQSHEGFKDPTLPPLDLWVLPHDPHQSPSEQGGVSAVIKKTYYTYINVSGEVETKGK
NKESKSHLVNIEQAPETKNSLSEEFRSIMKEVKTICCQDAQKYGRGGFQYDFKRVTVFLQ
RQAQKKPGNILTCRRMEKRHRVWKPQGTSMKPGVLRAKALGKAHLIILRDSTRHCLQAFP

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_1|1263_bp
atggctccgggggcaccggcccggctcccggaccctggcgtgcgcggccccgctgctacc
agccgcgcgcacgcccagacccgggccccacggcctgtgcgcgccgcctaccggccaggc
agcgggctgcacccagaccctccagtgaatgtctcaaccaggccgtcctggggcggctgt
ggtatcccgacggtcaccaacttctcttccaaactgccttggacaaaaaactttcttgtc
acatttggtcacttggagcctcctgagagagtagggcatgctagacctttgcaaggcttg
tctgagagctacagatctactgttttcctgcaggttttattgcttgtagatcattgggtg
gccttcctgaatgctggcttagaccagtctatacctgtcagctccagagctgtgagtcct
ggtcagatgacagctgtaaagaaaccagatgtcctctctccagtccgtgcctccaagatg
acaaagaaaaggaacaacggcctcaccaaaaagggccacagccatgtgcagcctatttgc
tgcatgaactgtgcccgatgcatgcccaaggacaaggctattaagaaatttgtcattcga
aacatagtggagcccgcagcagtcagggacatttttgaagcgagggtcttcaatgcctat
gtgctttccaagcagtatatgaagctacattactgtgtgagttgtgcaattcacagcaaa
gtagtcagaaatcaatctcatgaaggcttcaaggacccaacactcccacccttagacctg
tgggtgctgccccatgacccccaccaaagcccatctgaacaaggaggagtcagtgctgtc
atcaagaaaacctactacacctacattaatgtgtctggagaagtggaaactaaggggaaa
aataaggaaagcaaaagtcacctggtgaacattgagcaggccccggagacaaaaaactcc
ttatctgaggaatttagaagtataatgaaagaagtgaagaccatctgctgccaggatgcc
cagaagtatggaagagggggttttcagtatgatttcaaaagagtcaccgtattcctgcag
agacaggcccagaaaaagccagggaacatcctgacctgccgaaggatggagaaaagacac
agagtctggaagccccagggcaccagtatgaagccaggggtgctgagagcaaaggccctg
ggaaaagcccacctcatcattctgagggacagcacccggcactgtctgcaagccttccca
tag

>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_2|616_aa
MPFRSVLKGAGEGKYEDARKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWT
LLIVWGYEFVFQPESLWSRFKKKCFKLTRKMPIIGRKRDSSKRFRNEPGYIPVKLSLRIQ
IQDKLNKTKDDISKNMSFLKVDKEYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASG
TVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVT
SGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEV
DVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKGYKGNSLMFFVFWNKLAVKYKIPL
HVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYR
NYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKS
ELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFPPSIHFCITLLHA
RKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAELSSVFLDSLYST
DTVTQGSQMNGSPKPH

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_2|1851_bp
atgcctttcagaagtgtcctgaagggcgctggggagggcaaatatgaggatgccaggaag
gcctttgagccctacttagagattttggaagtatactccacaaaagccaagaattatgta
aatggacattgcaccaagtatgagccctggcagctaattgcatggagtgtcgtgtggacc
ctgctgatagtctggggatatgagtttgtcttccagccagagagtttatggtcaaggttt
aaaaagaaatgttttaagctcaccaggaagatgcccattattggtcgtaagagggacagc
agcaagaggttcaggaatgagcctggctatattccagtgaaactttctttacgaattcag
attcaagacaagttgaacaagaccaaggatgatattagcaagaacatgtcattcctgaaa
gtggacaaagagtatgtgaaagctttaccctcccagggtctgagctcatctgctgttttg
gagaaacttaaggagtacagctctatggacgccttctggcaagaggggagagcctctgga
acagtgtacagtggggaggagaagctcactgagctccttgtgaaggcttatggagatttt
gcatggagtaaccccctgcatccagatatcttcccaggactacgcaagatagaggcagaa
atcgtgaggatagcttgttccctgttcaatgggggaccagattcgtgtggatgtgtgact
tctgggggaacagaaagcatactgatggcctgcaaagcatatcgggatctggcctttgag
aaggggatcaaaactccagaaattgtggctccccaaagtgcccatgctgcatttaacaaa
gcagccagttactttgggatgaagattgtgcgggtcccattgacgaagatgatggaggtg
gatgtgcgggcaatgagaagagctatctccaggaacactgccatgctcgtctgttctacc
ccacagtttcctcatggtgtaatagatcctgtccctgaagtggccaagggctataaagga
aattctcttatgttctttgttttttggaacaagctggctgtcaaatacaaaatacccctt
catgtcgacgcttgtctgggaggcttcctcatcgtctttatggagaaagcaggataccca
ctggagcacccatttgatttccgggtgaaaggtgtaaccagcatttcagctgacacccat
aagtatggctatgccccaaaaggctcatcattggtgttgtatagtgacaagaagtacagg
aactatcagttcttcgtcgatacagattggcagggtggcatctatgcttccccaaccatc
gcaggctcacggcctggtggcattagcgcagcctgttgggctgccttgatgcacttcggt
gagaacggctatgttgaagctaccaaacagatcatcaaaactgctcgcttcctcaagtca
gaactggaaaatatcaaaggcatctttgtttttgggaatccccaattgtcagtcattgct
ctgggatcccgtgattttgacatctaccgactatcaaacctgatgactgctaaggggtgg
aacttgaaccagttgcagttcccacccagtattcatttctgcatcacattactacacgcc
cggaaacgagtagctatacaattcctaaaggacattcgagaatctgtcactcaaatcatg
aagaatcctaaagcgaagaccacaggaatgggtgccatctatggcatggcccagacaact
gttgacaggaatatggttgcagaattgtcctcagtcttcttggacagcttgtacagcacc
gacactgtcacccagggcagccagatgaatggttctccaaaaccccactga

>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_3|124_aa
MVSPGVRGRDRGSGAGAAAGEAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHF
KDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVA
VSMT

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_3|375_bp
atggtgagtccaggggtgcgcggccgcgatcggggcagcggggccggggcagccgcgggc
gaggctggcaaagcacacaggctgagcgctgaggagagggaccagctgctgccaaacctg
agggctgtggggtggaatgagctggaaggccgtgatgccatcttcaagcagtttcatttc
aaagacttcaacagggcctttgggttcatgacaagagtggccctgcaggctgagaaactg
gaccaccatcctgaatggtttaacgtgtacaacaaggtccacatcacgctgagcacccat
gagtgtgccggcctttcagaacgggacataaacctggccagcttcatcgaacaagtagca
gtgtccatgacatag

>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_4|134_aa
MLPQAKELQELPAAGRVQWTLPYIRGRSFMGELPTLPQRQLTWNDINIGSWSQYGFLDLP
QGTRAQDPPNVGTHKGCNAGPLPSLVEGSCPTEQKLQQGQAGPGATGQSGERGRLSCQHA
AVHQAADGGDKRAI

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_4|405_bp
atgctgccacaagccaaggaactccaggagctaccggcagctggaagagtgcagtggacc
ctgccttatatccggggcaggtccttcatgggagagcttcccactctgccccagaggcag
ctgacctggaatgatattaacataggatcttggtcccagtacggtttcctggacctcccc
caaggaacaagagctcaggacccaccaaatgtgggcacccacaaaggctgtaacgctggc
cctctaccctcactggtggagggcagctgccccacagaacagaagctgcagcagggccaa
gctggtccaggagccacgggccagagtggagaaaggggccgcctgagctgccaacatgcc
gctgtccatcaggctgcagatggtggagataaaagagctatttag

>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_5|327_aa
MASTTSLTPRPLQDLPSLGSPMQRVSELESHLQVADSEPLVIQTEKMSPREALGTWIKVG
KISLLGLRGAEGQQAPWLIFPGFGGTGAYSPFNAVKERILASAYTLWAGTVSSLSHLPRV
SGDAGARSALVDFRSSCPLGGSRGLEAMNENSLSTLPVHTARDWLGSEDAETTATVLTFS
WALFPSFQFPAIRRLCKAFGPQQTICSDAGPVRKTWPHPLSSLGRRFMRQSKTDDTPFGD
TDKSLHISFYCHVTWGHPSISVCHTAQMRPMAAITHQPEAAAESLTQDPENLNPTVHGGL
ELLSHGFLASETVLRRAPIPVMATILY

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_5|984_bp
atggccagcaccacctcactcacccccagacccctccaggacctccccagcctggggagc
ccaatgcagagagtgtctgagctagaaagtcacttacaggttgcagattctgagcccctg
gtgatccagacggagaaaatgagtcccagagaagccctaggcacctggatcaaggtgggc
aaaatcagcttgctgggcctccggggggcagaggggcagcaggcaccctggttgatattc
cctggctttggaggcactggtgcatatagcccgttcaatgccgtgaaagaacgcatcttg
gcttctgcatacaccttgtgggcagggacggtgtcttctctttcacatctgccccgtgtc
tcaggtgatgctggagctcgatcagctcttgtggactttcgaagctcctgtccacttgga
ggctccaggggcctcgaggccatgaatgagaactcactgtccacactgcccgtccacact
gcccgcgactggctgggctctgaggatgcagagaccaccgccactgtcctcacgttctct
tgggctctatttccatccttccagttcccagccatccggcgtctctgcaaggcctttggt
ccccagcagaccatctgcagtgatgcaggcccggtccggaagacgtggcctcatccactg
tcttcactaggaagaagattcatgaggcagagcaagacagatgacacgccttttggggat
acggacaagtctctgcacatctctttctactgccacgtcacctggggtcatccgtccatc
tcagtgtgccacactgcccagatgaggccgatggcagccatcactcatcagcctgaagca
gctgcagaatccttaacccaggacccagagaacctcaacccaacggttcatggagggctg
gaacttctaagccatggatttctagcatccgaaacagttttgagacgggctccaatacct
gtcatggccaccatcctttactga

>gi568815588r:70783953_70985930|GENSCAN_predicted_peptide_6|279_aa
XRIGTFGKAVERLQRGLRPQSRAADLQQLAEECTFQVWHPNLVFQVPALAQATLECENRG
PACCHMVGSMHVFPMGLDIPLVVETGGQLRASPTDVPEQELQAFLPRSKGTLAQPPTAIF
ISLPEDFDCWVLFAEEKARNVKDASWEQPSSNGWTHKILSITGPGSKPQIPQKMPVIGSA
CRGEPNLVQQEVPGAQEAGGKAGGMGNFEGTERPRGTKLCGINCSWLPGRYNPPNECPDL
NRSCLCSSFWFLLASLREEPWACILDGHPGHPLAFSAGE

>gi568815588r:70783953_70985930|GENSCAN_predicted_CDS_6|840_bp
nnaagaattggcaccttcggcaaagcagtggagcgcctgcagcgaggcctcaggcctcag
agcagagcagcagacctccagcagcttgcagaagaatgcacgttccaggtttggcatcca
aacctggtctttcaggtgcctgccttggcgcaggccacactggagtgtgagaaccgaggg
ccagcctgctgtcatatggtaggaagcatgcatgtgttccccatgggcctggacataccc
ctggtggtggaaactgggggccagctgagagcatcccccactgatgtccctgagcaagaa
cttcaggccttcctcccaaggtccaagggcacactggcccaaccgccaactgccatcttt
atttctttgcctgaggactttgactgctgggtcctctttgctgaagagaaggccagaaat
gtcaaggatgcctcctgggagcagccttcaagcaatggctggactcacaaaatcctgagc
atcacggggcctggcagcaaaccccagatcccccagaaaatgcctgtgatcggatcagct
tgcagaggggagcccaacttggtccagcaggaggtgccgggagcccaggaagcaggtgga
aaagctgggggcatgggcaactttgagggtacagagaggccacgagggaccaagctctgc
gggatcaactgttcctggctcccagggagatataaccccccaaatgagtgcccagacctc
aacagaagctgtctctgctcctccttctggttcttgctggcttccttgagggaggagccc
tgggcctgcatcctggacgggcacccaggtcaccccctcgccttcagtgctggtgaatga