GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:14:04

Sequence gi568815589f:114223134_114329904 : 106771 bp : 51.71% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4379   4456   78  1  0   72   44    50 0.331   0.09
 1.02 Intr +   7946   7999   54  1  0  146  121    44 0.984  13.16
 1.03 Intr +   8689   8725   37  0  1   88   54    36 0.498  -1.48
 1.04 Intr +   8882   8982  101  0  2   95   91    15 0.473   2.83
 1.05 Intr +  12466  12519   54  0  0   75   86    23 0.314   0.46
 1.06 Intr +  13848  13901   54  2  0   94  119   -18 0.423   1.56
 1.07 Intr +  14529  14582   54  2  0  147   87    41 0.993   9.56
 1.08 Intr +  17087  17140   54  1  0  134  113    67 0.473  13.46
 1.09 Intr +  17301  17354   54  2  0  130   78    21 0.456   4.96
 1.10 Intr +  19054  19098   45  0  0   93  105    19 0.752   3.19
 1.11 Intr +  22733  22777   45  1  0  121   92    30 0.606   5.79
 1.12 Intr +  26856  26960  105  2  0   59   12   134 0.668   3.81
 1.13 Intr +  27482  27535   54  1  0   47  115    20 0.419   0.26
 1.14 Intr +  29460  29513   54  2  0  109   91     1 0.550   2.16
 1.15 Intr +  29746  29799   54  0  0  109  115    26 0.789   7.06
 1.16 Intr +  35408  35461   54  1  0  102  114     9 0.824   4.56
 1.17 Intr +  38920  39120  201  0  0   90   68    19 0.387   0.10
 1.18 Intr +  41222  41275   54  1  0  104   81    -3 0.529   0.26
 1.19 Intr +  41791  41835   45  0  0  131   91    -2 0.891   3.49
 1.20 Intr +  42289  42342   54  0  0   97  111    10 0.917   3.86
 1.21 Intr +  43432  43485   54  0  0  129  113    13 0.968   7.56
 1.22 Intr +  46108  46161   54  0  0   57  114    25 0.742   1.66
 1.23 Intr +  47595  47648   54  2  0   98  115    29 0.965   6.26
 1.24 Intr +  52528  52635  108  0  0   79  100    83 0.737   9.58
 1.25 Term +  52774  52914  141  0  0   46   37    64 0.359  -4.66
 1.26 PlyA +  53472  53477    6                              -0.45

 2.02 PlyA -  54736  54731    6                              -0.45
 2.01 Sngl -  55446  54997  450  0  0   81   38   541 0.999  44.97
 2.00 Prom -  56371  56332   40                              -0.51

 3.00 Prom +  56377  56416   40                              -1.81
 3.01 Init +  58604  58921  318  1  0   77   25    79 0.505  -3.57
 3.02 Intr +  59144  59197   54  1  0  128  100    70 0.996  11.86
 3.03 Intr +  59324  59431  108  1  0  129   89    83 0.992  13.48
 3.04 Intr +  60576  60629   54  2  0   85   69    27 0.528   0.16
 3.05 Intr +  61591  61644   54  0  0  133   98    55 0.666  10.66
 3.06 Intr +  65322  65378   57  2  0   96  102    88 0.991  10.57
 3.07 Intr +  65569  65622   54  0  0   93   95    42 0.840   5.06
 3.08 Intr +  65781  65834   54  2  0  126   86     5 0.639   3.76
 3.09 Intr +  66039  66162  124  2  1  118   94    34 0.577   7.66
 3.10 Intr +  66647  66801  155  0  2   56   23    47 0.472  -4.70
 3.11 Intr +  67091  67198  108  1  0   98   99    45 0.846   7.58
 3.12 Intr +  67677  67784  108  2  0   88   77    94 0.997   9.28
 3.13 Intr +  68970  69077  108  2  0   78  117    31 0.889   5.98
 3.14 Intr +  76937  76990   54  1  0  125   86    23 0.659   5.46
 3.15 Intr +  77492  77554   63  1  0  100  101    51 0.992   7.01
 3.16 Intr +  77939  77992   54  1  0   81   96    32 0.712   2.96
 3.17 Intr +  78151  78186   36  0  0  104  106    39 0.899   6.24
 3.18 Intr +  78312  78329   18  2  0  137   96     4 0.793   3.39
 3.19 Intr +  78549  78584   36  2  0  134   94   -19 0.647   2.24
 3.20 Intr +  78949  78975   27  0  0  131  111     7 0.774   6.10
 3.21 Intr +  81475  81612  138  0  0   62   49    71 0.596   1.77
 3.22 Intr +  83387  83555  169  1  1   90   81   199 0.963  19.43
 3.23 Intr +  84536  84645  110  0  2   92   75   102 0.978   9.80
 3.24 Intr +  86127  86345  219  2  0  128   88   284 0.999  31.43
 3.25 Term +  87416  87562  147  1  0  109   43   211 0.999  16.91
 3.26 PlyA +  89350  89355    6                               1.05

 4.00 Prom +  96761  96800   40                              -0.21
 4.01 Init + 100001 100114  114  1  0   68  100   190 0.999  16.37
 4.02 Intr + 100530 100672  143  2  2   92   97   178 0.997  18.76
 4.03 Intr + 100885 100955   71  1  2   76   89   112 0.996   9.42
 4.04 Intr + 101657 101764  108  0  0   94   66    82 0.993   7.36
 4.05 Intr + 101916 102019  104  1  2  111   92   193 0.888  22.39
 4.06 Term + 103159 103224   66  0  0  118   43    77 0.993   4.43
 4.07 PlyA + 103318 103323    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:114223134_114329904|GENSCAN_predicted_peptide_1|571_aa
MVLTSWGYCEQLVRVQATSIVPGMAKGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKASSW
SLWVGLRQMVLGARKPQQIVQEQLLQQGGQGEQGVPGVSGDPGFQGDKGSQGLPGFPGAR
GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPE
GDEGPMGPPGAPGLEGEPGDPGRPGPVGEQGDGKDWGHLEEPPGTQRQVVTQRSSAEQQE
LQRVSGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPGMPGGMGTPGEPGPQG
PPGSRGPPGMRGAKGRRGGVCLSERQSPEPEIIPQEGSVVCHQLSPCPSSHDLTRPHPMW
LQLRQACAHESRVLSLMTWCDSVHGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGIP
GPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGDLGPLGTPGEQGLIGQRGEPGLEGDS
GPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRFAREPICSMLHGSGE
QPRLLILLAALPCANLVPADLISSIPHIQTH

>gi568815589f:114223134_114329904|GENSCAN_predicted_CDS_1|1716_bp
atggtgcttacctcctggggttactgtgagcagctggtgagggtccaagccaccagcatc
gtccctggcatggcaaagggtgacttaggagtgttgggtccgattggctacccgggaccc
aagggcatgaagggactgatgggcagcgtgggggagcccggactgaaagcttcttcctgg
tcactctgggtggggctcaggcagatggttctgggagcccgaaaacctcagcagatagtg
caggagcagctgttgcagcaaggagggcagggtgaacaaggggttccaggtgtgtcagga
gatcccggattccaaggagacaaggggagccaggggttgccagggttccccggtgcacgg
gggaagccagggcctctgggcaaagtcggagacaaaggatccattgggtttcccgggccc
cctggacccgagggattcccaggagacatcggcccccctggcgacaatggcccagaaggc
atgaagggtaagcctggagcccgaggcctgccgggaccccgtgggcagctggggcccgag
ggagatgagggacccatggggccgccaggggcccctggcttggagggggaaccaggggat
cctggtcggccggggcctgtgggagagcagggagacggcaaggactggggccacctagaa
gaaccccctggaacccagaggcaagttgtcacccagcggagttcagcagagcagcaggag
ctgcagcgtgtgtctggatttatgggattcattggtctggtcggggagccaggaatcgtg
ggagaaaagggtgatcgtggcatgatgggacccccaggcgtgcctggacccaaggggtcg
atgggtcatcctggaatgccaggtggtatggggacccctggagagcctggaccccagggt
cctccaggatctcgaggcccaccaggcatgaggggagcaaagggacgtcggggaggtgta
tgtctcagcgagagacagagcccagagccagagatcatccctcaggagggttcagttgtc
tgccatcagctcagcccctgtcccagctcccatgacctgacacggccccaccccatgtgg
ctccagctccgccaggcctgtgcccatgaatcacgggtgttaagcctaatgacgtggtgt
gacagtgtccacggcccccgaggaccggacggaccagctggggagcaagggtccaggggc
ctgaagggccctccaggaccccagggcagaccgggccggcctggacagcagggcatcccg
ggtccctcaggccccccaggcaccaagggcctcccaggagaaccgggccctcagggaccc
caggggccaattgggcctccaggagagatgggacccaagggtgaccttggacccctgggc
actcctggggagcagggcctcattgggcaacggggagagccaggccttgagggtgacagt
ggccccatgggacctgatgggctgaagggggacaggggagacccagggcctgatggagaa
catggcgagaaaggccaggaagggctgatgggtgaggacgggccccccggcccccctggc
gtcactggtgtccggtttgccagagaaccaatctgctcaatgctccatggctctggagaa
caacctcggttactcatcctcctggctgccctgccctgtgcaaacctggtccctgccgac
ctcatctcatccatcccccatatccagacacactaa

>gi568815589f:114223134_114329904|GENSCAN_predicted_peptide_2|149_aa
MTTIITPLPSLLPSLPPIITTTTTIISTTTTIITTTITTTIISAPSSSLSLPLSLSPPPS
PPAPSSPSPPLHYHHRHQHQHHHHHLITVTTTTTTTINTPIIFIIITTTNTIISTTTITI
IIIVITTTTIAAAPTHTIHSPSPPATTSL

>gi568815589f:114223134_114329904|GENSCAN_predicted_CDS_2|450_bp
atgaccaccatcatcactcccctgccatcactactaccatcactaccacccatcatcacc
accactaccactatcattagtaccaccaccaccattatcaccaccaccatcaccaccacc
atcatcagtgccccatcatcatcattatcattaccactatcactatcaccaccaccatcg
ccaccagcaccatcatcaccctcacctccactccactatcaccatcgccaccagcaccag
caccaccatcaccacctcatcacagtcaccactaccaccactaccaccatcaacaccccc
atcatcttcatcatcatcaccaccaccaacaccatcatcagtactaccaccatcaccatc
attattatcgtcattaccaccactaccattgctgctgcccccacccacaccatccactca
ccatcaccaccagccaccaccagcctctag

>gi568815589f:114223134_114329904|GENSCAN_predicted_peptide_3|808_aa
MEPEQLGLIQGLQGAAGTLGKSHCIFGNLAASTGSGSHWGLMFKVVGRVEQHLALERAQC
RELLPVGHPWMPNSNHDNSKASNCRSRTRHPPLHPGLTVSTFLHRQGPEGKSGKQGEKGR
TGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGH
KGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG
LRGKPGQQGQPAETGHPPRERILGLPCVISPWFAGASGTPGVAGTQRIERRRVSKRSSGT
VASGSSQKIVNASEGTPRPRAGSVTAPGGSKASSGPRLPGQSAWGLQGLPGPRGVVGRQG
LEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESG
LPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKG
IQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPG
PPGGPIQLQQDDLGAAFQTWMDTSGALRPEVSPGALPMWDPFLGETQIDNGPHVSYSYPD
RLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDCEQKMVDGTYWVDPNLG
CSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLHLLSSEVTQHITIHCLNMTV
WQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKVQDGRWHQTLFTFRTQDPQQ
LPIISVDNLPPASSGKQYRLEVGPACFL

>gi568815589f:114223134_114329904|GENSCAN_predicted_CDS_3|2427_bp
atggagccagaacagctgggattgattcagggcctgcaaggcgcagctgggaccctgggc
aaaagtcactgtatctttgggaacttggctgcctcaactggaagcgggtctcattggggc
ctaatgttcaaggtcgttgggagggtggaacagcacttggcgctggagagagctcagtgc
agagagttgctccctgtaggacacccctggatgcctaacagtaaccatgacaacagcaaa
gccagcaattgcagaagccgcacccgccatccacccctgcacccaggcctcactgtcagc
acgttcttacatcgccagggtcctgaaggaaaatcagggaagcaaggcgagaagggccgc
actggagccaagggtgccaagggctatcaaggacagctgggtgagatgggcgtccctgga
gaccctggaccccctggcactccaggccctaaagggtcccggggcagcctgggaccaacg
ggtgctccgggacgcatgggggcccaaggagaaccgggactggctggttatgatggacac
aaaggcattgtgggaccccttggacctcctggaccaaaaggcgaaaagggggagcagggc
gaggacggcaaggctgaggggccccctgggccacctggagatcggggccctgtgggtgat
cgaggagaccgcggggaaccgggagaccctgggtaccctggacaggagggtgtgcaaggc
ctccgtggaaagccaggccagcagggccaacccgcggagactggccaccctccccgggag
agaatcctggggctgccttgcgtcatctcaccttggtttgcaggggcatccgggaccccg
ggggtggccgggacccaaaggatcgaaaggcgcagagtctctaaaagatccagtggaact
gtggcctctggctcctcccagaaaattgtcaatgccagtgaggggacaccaaggcccaga
gcaggctcagtgacagccccaggaggttccaaggccagctctggccccaggcttccaggc
cagagtgcttggggcctgcaggggctgccagggccccggggcgtggtggggagacagggc
ctcgagggcatcgctggaccagatgggcttcctggcagggacgggcaagcaggacagcag
ggggagcagggagacgatggggaccctggccccatgggccctgctgggaagagaggaaat
ccaggtgtggccggcttacctggagcacagggacccccaggattcaagggtgagagtggg
ttacccggacagctgggtccccctggcaagcgaggaacagagggcagaacggggctccct
ggaaaccagggggagcctgggtccaaaggccagccgggcgactctggcgagatgggcttc
ccaggaatggcaggtctcttcggacccaagggcccgcctggagacattggcttcaaaggc
atccagggccctcgggggccacctggcttgatgggaaaggaaggcatcgtcgggcccctc
ggaatcctgggaccttcgggactcccgggtccgaagggtgacaaaggcagccgtggggac
tggggattgcaaggtccgaggggtcctcccggccccagagggcggcccggccccccgggt
cctccagggggtcctatccaattgcaacaagatgatcttggggcagctttccagacgtgg
atggacaccagtggagcactcaggccagaggtatctccaggggctctccccatgtgggat
cccttcctgggagaaacgcaaatagataatggcccacatgtgagttacagctatccagac
cggctggtgctggaccagggaggagagatctttaaaaccttacactacctcagcaacctc
atccagagcattaagacgcccctgggcaccaaagagaaccccgcccgggtctgcagggac
ctcatggactgtgagcagaagatggtggatggtacctactgggtggatccaaaccttggc
tgctcctctgacaccatcgaggtctcctgcaacttcactcatggtggacagacgtgtctc
aagcccatcacggcctccaaggtcgagtttgccatcagccgggtccagatgaatttcctg
cacctgctaagctccgaggtgacccagcacatcaccatccactgccttaacatgaccgtg
tggcaggagggcactgggcagaccccagccaagcaggccgtacgcttccgggcctggaat
ggacagatttttgaagctgggggtcagttccggcccgaggtgtccatggatggctgcaag
gtccaagatggccgctggcatcagacactcttcaccttccggacccaagacccccaacag
ctgcccatcatcagtgtggacaacctccctcctgcctcatcagggaagcagtaccgcctg
gaagttggacctgcgtgcttcctctga

>gi568815589f:114223134_114329904|GENSCAN_predicted_peptide_4|201_aa
MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQ
EIQATFFYFTPNKTEDTIFLREYQTRQDQCIYNTTYLNVQRENGTISRYVGGQEHFAHLL
ILRDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDWKK
DKCEPLEKQHEKERKQEEGES

>gi568815589f:114223134_114329904|GENSCAN_predicted_CDS_4|606_bp
atggcgctgtcctgggttcttacagtcctgagcctcctacctctgctggaagcccagatc
ccattgtgtgccaacctagtaccggtgcccatcaccaacgccaccctggaccggatcact
ggcaagtggttttatatcgcatcggcctttcgaaacgaggagtacaataagtcggttcag
gagatccaagcaaccttcttttacttcacccccaacaagacagaggacacgatctttctc
agagagtaccagacccgacaggaccagtgcatctataacaccacctacctgaatgtccag
cgggaaaatgggaccatctccagatacgtgggaggccaagagcatttcgctcacttgctg
atcctcagggacaccaagacctacatgcttgcttttgacgtgaacgatgagaagaactgg
gggctgtctgtctatgctgacaagccagagacgaccaaggagcaactgggagagttctac
gaagctctcgactgcttgcgcattcccaagtcagatgtcgtgtacaccgattggaaaaag
gataagtgtgagccactggagaagcagcacgagaaggagaggaaacaggaggagggggaa
tcctag