GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:05:13

Sequence gi568815593r:103450864_103660248 : 209385 bp : 36.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1039   1034    6                               1.05
 1.02 Term -  13797  13513  285  0  0   95   39   121 0.490   2.32
 1.01 Init -  14089  14036   54  1  0   82   76    48 0.854   4.33
 1.00 Prom -  16116  16077   40                              -4.35

 2.08 PlyA -  17373  17368    6                               1.05
 2.07 Term -  20758  20597  162  1  0   14   43   159 0.695   0.95
 2.06 Intr -  23835  23800   36  0  0   79   82    40 0.454   0.04
 2.05 Intr -  35059  34881  179  2  2   73   92   149 0.470  12.52
 2.04 Intr -  48302  48192  111  0  0   89  100   233 0.966  24.03
 2.03 Intr -  65630  65534   97  2  1  111   64    23 0.638   0.86
 2.02 Intr -  68938  68802  137  2  2  -24   81   127 0.120   0.17
 2.01 Init -  75711  75252  460  0  1   53   86   310 0.444  23.26
 2.00 Prom -  76567  76528   40                              -9.65

 3.10 PlyA -  76862  76857    6                              -0.45
 3.09 Term -  77503  77057  447  1  0   23   49   270 0.192  10.83
 3.08 Intr - 101553 101354  200  1  2   43  103   170 0.995  12.15
 3.07 Intr - 103990 103877  114  2  0  100  107   -16 0.666   1.00
 3.06 Intr - 105235 105068  168  2  0   74   99   106 0.997   9.30
 3.05 Intr - 108605 108016  590  1  2   99   99   406 0.999  34.14
 3.04 Intr - 109391 109180  212  2  2   94   59   138 0.393   8.29
 3.03 Intr - 121845 121722  124  2  1   70   66    86 0.005   4.27
 3.02 Intr - 150822 150631  192  2  0   46   52   117 0.104   1.59
 3.01 Init - 154683 154565  119  0  2   78   87    94 0.330   8.02
 3.00 Prom - 176570 176531   40                              -5.75

 4.00 Prom + 176585 176624   40                              -4.45
 4.01 Init + 190985 191081   97  1  1   67   67   122 0.496   6.52
 4.02 Term + 192349 192500  152  2  2   72   53    64 0.394  -1.61
 4.03 PlyA + 194367 194372    6                               1.05

 5.02 PlyA - 194614 194609    6                               1.05
 5.01 Term - 202089 201941  149  1  2   51   42   168 0.772   5.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  89383  89441   59  1  2   68  111    31 0.892   1.01
S.002 Term +  91077  91180  104  1  2   83   41    94 0.891   1.66
S.003 Term - 100108  99998  111  1  0   82   35    62 0.867  -2.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:103450864_103660248|GENSCAN_predicted_peptide_1|112_aa
MAVSTKVDVFERKKCAWEPKAVQNISWKTKEKQGQEEEGKSIKAQQCCPYHIMGISFLER
RLHISHPGPFLQGCRKITCFTHRSLPVSHVSLSAPAAHLGFLWRYLTPADIF

>gi568815593r:103450864_103660248|GENSCAN_predicted_CDS_1|339_bp
atggcagtaagcacaaaagtggatgtctttgaaaggaaaaagtgtgcttgggagcccaaa
gctgtccaaaatatcagttggaaaactaaagagaaacaaggccaggaggaggagggaaag
tccatcaaagcccagcaatgctgcccctatcacataatgggtatttctttcctggagaga
agactacacatcagccatccaggacctttcctgcaaggatgccgtaaaatcacttgcttc
acccatcgttcactacctgtgtcacacgtttctctgtcagcacctgcggcccacctgggc
ttcctatggaggtatctgaccccagcagacattttttag

>gi568815593r:103450864_103660248|GENSCAN_predicted_peptide_2|393_aa
MIKKLVVSNCPMGMKNRKESPSSLENVEKDKCQIIPVVNNAYHRDFEDLSNENRDKVCFQ
MHFSANTAESNCAVCASDNLFLIEKTLTNDVDLHGNQDKENLGLTSFKQEPAQCQRIAST
GPNTEEDENKNDSKENYCYQIHTLMPPQKQALKEVEELVMVPREKQLTSGPEGGSNTKKA
KNPVQQQGAYLPAISQKNPESHLFGLHQGVNLPSDILLELTSGDDQEAPGRNSAAKKAGL
QIGDAVLAVNGTEVTSVELAEAVNLAMKGTDILTLVVGSDISRCPSTPWPTCHGYLYKRT
HSGIVKGWRKRWFVLKYDGCLYYYKHNKGEGAIECSSVALDFCTCNVGKRIPDGSKSLMK
GYTGGCWDPIREPKVGQFDCIMGYVEKTNGDLD

>gi568815593r:103450864_103660248|GENSCAN_predicted_CDS_2|1182_bp
atgataaagaaactagttgtttctaattgtcccatgggaatgaaaaaccgtaaagagtca
cccagctctctggaaaatgttgaaaaagacaaatgccagataatacccgtggtgaataat
gcataccacagagattttgaagacctgtcaaatgagaatcgtgacaaagtctgttttcaa
atgcatttttcagcaaacactgctgagtccaactgtgcagtgtgtgcttcagataatctg
tttcttattgaaaaaacactgaccaatgatgtggacctacatggtaaccaagataaagaa
aaccttggactaactagttttaaacaggagccagcacagtgccaaaggattgcatcaaca
gggccaaatactgaagaggatgagaacaaaaatgactcaaaggaaaattactgttaccaa
atacacacgttgatgccacctcagaagcaagctttgaaagaggtggaagagctagtgatg
gttcccagggagaagcaattgaccagtgggccagaaggaggcagcaatacaaagaaggca
aaaaacccggttcagcagcagggagcttatttgccagcaatatcacagaagaatccagag
tctcatttatttggactacatcaaggggttaatttaccttctgacatcctgttggagttg
accagtggggatgatcaggaggcgcctggaaggaacagtgccgccaagaaagccgggctc
cagattggagatgcggtactggctgtcaatggcactgaggtcaccagtgtcgagcttgca
gaagctgtgaaccttgcaatgaaaggtacagacatcttgaccctggtggtaggatctgat
atcagccgctgtcccagtaccccttggcccacctgccacggctacctatataagaggact
cactccgggatcgtgaagggttggagaaagaggtggtttgtgctgaagtatgatggatgc
ctctactattacaaacataacaagggtgaaggggcaattgagtgcagcagcgtggcactg
gatttctgcacatgtaatgtggggaagagaattccagatggaagcaaaagcctgatgaaa
ggctacacaggagggtgttgggatccaattagggagccaaaagtgggccagtttgattgt
atcatgggatatgtggagaagactaatggagacttagactag

>gi568815593r:103450864_103660248|GENSCAN_predicted_peptide_3|721_aa
MEKPDKRPVTPATVIFSKQGKGQHCPHATTRTQPDPTEQKSKMLLRKRLVVPRLPPLSRV
YVATLRGTGDKSIKQHRAEAVKNGYYYVQEKRLEVNEHSPFFPCTGKCICKNRVSTMGLK
SDKLWIADSAVSAWPTRALGYQDFMEEMSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILS
HSPSLLNETSENGWTALMYAARNGHPEIVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKH
IANLLATAKGGKKPWFLTNEVEECENYFSKTLLDRKSEKRNNSDWLLAKESHPATVFILF
SDLNPLVTLGGNKESFQQPEVRLCQLNYTDIKDYLAQPEKITLIFLGVELEIKDKLLNYA
GEVPREEEDGLVAWFALGIDPIAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARS
VLAWHSRYKFCPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPD
GTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMP
SSLMIGCLALAVSTEIKVDKNEIEDARWFTREQTGTLGKSKENGDEGMSASVNEKQNSSF
LPKDKKQHPCDSKIHRKKGNDDPPLAVSHQLEKVLPMITFNDYGESLSENITLQNLLGTV
EDFKPAKGKFITEVKRGDFNVQIEIKKNFVCKPGIQFPTKKETSKMLPALLYQTHSEMLP
F

>gi568815593r:103450864_103660248|GENSCAN_predicted_CDS_3|2166_bp
atggagaaacctgataaaaggccagtaacaccagccaccgttatcttcagcaagcaaggt
aagggtcaacactgcccccatgctaccaccagaacacaaccggatccaacagagcaaaaa
agcaagatgctcctcagaaaaaggctagtggttccacgccttccacccttaagtagagtt
tatgtggcaactttgcgaggaactggtgacaagtctatcaagcagcatagagctgaagct
gttaagaatggatattactatgtccaggagaaaaggctagaggtcaatgaacattcacct
ttttttccatgtacggggaaatgtatttgcaaaaacagagtgagcacaatgggccttaaa
tcagacaagctgtggattgctgacagcgccgtcagcgcttggcctaccagggcccttgga
tatcaggattttatggaagaaatgtcttctgtaaaaagaagtctgaagcaagaaatagtt
actcagtttcactgttcagctgctgaaggagatattgccaagttaacaggaatactcagt
cattctccatctcttctcaatgaaacttctgaaaatggctggactgctttaatgtatgcg
gcaaggaatgggcacccagagatagtccaatttctgcttgagaaagggtgtgacagatca
attgtcaataaatcaaggcagactgcactggacattgctgtattttggggttataagcat
atagctaatttactagctactgctaaaggtgggaagaagccttggttcctaacgaatgaa
gtggaagaatgtgaaaattattttagcaaaacactactggaccggaaaagtgaaaagaga
aataattctgactggctgctagctaaagaaagccatccagccacagtttttattcttttc
tcagatttaaatcccttggttactctaggtggcaataaagaaagtttccaacagccagaa
gttaggctttgtcagctgaactacacagatataaaggattatttggcccagcctgagaag
atcaccttgatttttcttggagtagaacttgaaataaaagacaaactacttaattatgct
ggtgaagtcccgagagaggaggaagatggattggttgcctggtttgctctaggtatagat
cctattgctgctgaagaattcaagcaaagacatgaaaattgttactttcttcatcctcct
atgccagcccttctgcaattgaaagaaaaagaagctggggttgtagctcaagcaagatct
gttcttgcctggcacagtcgatacaagttttgcccaacctgtggaaatgcaactaaaatt
gaagaaggtggctataagagattatgtttaaaagaagactgtcctagtctcaatggcgtc
cataatacctcatacccaagagttgatccagtagtaatcatgcaagttattcatccagat
gggaccaaatgccttttaggcaggcagaaaagatttcccccaggcatgtttacttgcctt
gctggatttattgagcctggagagacaatagaagatgctgttaggagagaagtagaagag
gaaagtggagtcaaagttggccatgttcagtatgttgcttgtcaaccatggccaatgcct
tcctccttaatgattggttgcttagctctagcagtgtctacagaaattaaagttgacaag
aatgaaatagaggatgcccgctggttcactagagaacagactgggacattagggaaatct
aaggaaaatggagatgagggtatgtctgcttctgtgaatgaaaagcagaattcttctttt
cttcctaaagataagaaacagcatccatgtgacagcaaaatacataggaagaagggaaat
gatgatcctcctttggctgtctctcatcaactggagaaagtcttacctatgatcacattt
aatgactatggagaatcattatcagaaaacattacattacagaatctcctaggcacagta
gaagactttaagccagcaaaaggcaaatttattacagaagtgaaacgtggggatttcaat
gtgcaaatagaaatcaagaaaaactttgtctgtaaaccaggaatacagttcccaacaaaa
aaagagacatccaaaatgttgccagcgttgctctatcagacacattcagagatgctaccc
ttctag

>gi568815593r:103450864_103660248|GENSCAN_predicted_peptide_4|82_aa
MQRGSLGIMLHMVALACGWFWVTSISTSIAAPGKVNKILLGEVFESIIINNLEIRKSSLI
SQVGPKSNDERHSRQTKEEEAT

>gi568815593r:103450864_103660248|GENSCAN_predicted_CDS_4|249_bp
atgcagagaggaagcctggggatcatgctgcacatggtggccctggcctgtgggtggttc
tgggttaccagcatctccacatctattgcagccccaggaaaagttaacaaaatcttactt
ggagaagtctttgaatctataattattaataatcttgagataagaaagtcatccttgatt
tcccaggtaggccctaaatccaatgatgagcgacatagcagacagacaaaagaggaagag
gcaacgtga

>gi568815593r:103450864_103660248|GENSCAN_predicted_peptide_5|49_aa
XVYGGVQKEGACMEGTESKTRQSAVTELKKSHLTEQVLSDTGAPSNSDF

>gi568815593r:103450864_103660248|GENSCAN_predicted_CDS_5|150_bp
nttgtgtatggaggagtgcagaaggaaggtgcatgtatggaaggaacagaatcaaaaact
agacagtcagccgtcactgaattgaagaaatctcatctaacagagcaggttttgtctgat
actggagcaccttccaattccgatttttaa