GENSCAN 1.0	Date run:  3-Nov-116	Time: 09:39:45

Sequence gi568815594r:117475101_117676109 : 201009 bp : 34.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    735    730    6                               1.05
 1.05 Term -   4900   4872   29  2  2  118   38    19 0.002  -2.84
 1.04 Intr -  24335  24166  170  1  2   75   82    76 0.106   4.37
 1.03 Intr -  29064  28909  156  2  0   82   76    58 0.101   2.20
 1.02 Intr -  41134  41044   91  2  1   67   53    84 0.052   0.93
 1.01 Init -  44759  44597  163  2  1   70   72    66 0.650   3.14
 1.00 Prom -  93633  93594   40                              -4.25

 2.03 PlyA -  93707  93702    6                               1.05
 2.02 Term - 100462  99998  465  1  0   -8   41   368 0.800  16.53
 2.01 Init - 101009 100476  534  2  0   49  -29   557 0.489  33.00
 2.00 Prom - 111808 111769   40                              -5.95

 3.00 Prom + 114243 114282   40                              -3.55
 3.01 Init + 121314 121385   72  2  0   70   93    19 0.194   1.72
 3.02 Intr + 128443 128558  116  0  2   27  109   134 0.318   7.73
 3.03 Intr + 176455 176575  121  1  1   93   11   133 0.151   5.68
 3.04 Term + 176977 177090  114  0  0   75   48   164 0.326   8.69
 3.05 PlyA + 177666 177671    6                               1.05

 4.02 PlyA - 177938 177933    6                               1.05
 4.01 Sngl - 183144 181036 2109  0  0   70   44   630 0.984  50.78
 4.00 Prom - 183462 183423   40                             -10.45

 5.00 Prom + 183987 184026   40                             -12.62
 5.01 Sngl + 184243 184650  408  0  0   45   49   300 0.999  17.84
 5.02 PlyA + 184850 184855    6                               1.05

 6.05 PlyA - 185907 185902    6                               1.05
 6.04 Term - 192449 192238  212  0  2   12   42   117 0.199  -4.03
 6.03 Intr - 193829 193132  698  1  2  -45   86   295 0.132   6.20
 6.02 Intr - 194484 194144  341  0  2   -3   77   243 0.102   7.45
 6.01 Intr - 197422 197304  119  2  2   82   89    61 0.088   4.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_1|202_aa
MDKFLDTYTLPRLNQEEVDSLNRLKTGSEIEAIINSLPTKKVKDQTNSQLNSTRGYQEFS
AELMELPSTRNAGLRSQCNKFMAGRFLGKINYSGHKDPLHKVAASTALITALSLTTTIDI
VTIWAHQNKLRGTLHFLHKKKQDHVFCKDMDGAGGHYPQQTNTGCCRCGKEDSYSHGSKV
LMRSDSQLTCEQIGCPLTLQAL

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_1|609_bp
atggataaattcctcgacacatacaccctcccaagactaaatcaggaagaagttgattcc
ctgaatagactaaaaacaggctctgaaattgaggcaataattaatagcctaccaaccaaa
aaagtcaaagaccagacaaattcacagttgaattctaccagagggtatcaagagttcagt
gcagaactaatggaactgccatcaaccagaaatgctggactcagatctcagtgcaataaa
tttatggctgggagattcctgggaaagataaattactctggacacaaggaccccttgcat
aaagtggctgcttcaactgctctgatcacagcactttcactgactacaactatagacata
gtaactatttgggcacaccagaataaactaagaggcaccctccacttcctccataaaaag
aaacaagatcatgtcttttgcaaggacatggatggagctggaggccattatcctcaacaa
acaaacacaggatgctgtagatgcggcaaggaagacagctatagccatggctccaaagta
cttatgagatcagactcacaattaacatgtgaacaaataggttgcccactcaccctgcag
gccttgtga

>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_2|332_aa
MRARSMDRAAVARVGAVVSASVCALVAGVVLAQYIFTLKRKTGRKTKIIEMMPEFQKSSV
RIKNLTRVEEMICGLIKGGAAKLQIITDFDMTLSRFSYKGKRCPTCHNSIDNCQLITDEC
RKKLLQLKKKYYAIEVDPVLTVEEKYPYMVEWYTKSHGLLVQQALPKAKLKEIVAESDKD
MKNFFDKLQQHSIPVFIFSAGISDVLEEVIRQAGVYHPNVKVVSNFMDFDETGVLKGFKG
VLIHIFNKHDGALRNTEYFNQLKDNSNIILLGDSQGDLRMADGVANVEHILKVGYLNDRV
DELLEKYMDSYDIVLVQDESLEVANSILQKIL

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_2|999_bp
atgagggcccggtccatggaccgcgcggccgtggcgagggtgggcgcggtagtgagcgcc
agcgtgtgcgccctggtggcgggggtggtgctggctcagtacatattcaccttgaagagg
aagacggggcggaagaccaagatcatcgagatgatgccagaattccagaaaagttcagtt
cgaatcaagaaccttacaagagtagaagaaatgatctgtggtcttatcaaaggaggagct
gccaaacttcagataataacggactttgatatgacactcagtagattttcatacaaaggg
aaaagatgcccaacatgtcataatagcattgacaactgtcagctgattacagatgaatgt
agaaaaaagttattgcaactaaagaaaaaatattacgctattgaagttgatcctgttctt
actgtagaagagaagtacccttatatggtggaatggtatactaaatcacatggtttgctt
gttcaacaagctttaccaaaagctaaacttaaagaaattgtggcagaatctgacaaagat
atgaagaatttctttgataagctccaacaacatagtatcccggtgttcatattttcggct
ggaatcagcgatgtactagaggaggttattcgtcaagctggtgtttatcatccaaatgtc
aaagttgtgtccaattttatggattttgatgaaactggggtgctcaaaggatttaaagga
gttctaattcatatatttaacaaacatgatggtgccttgaggaatacagaatatttcaat
caactaaaagacaatagtaacataattcttctgggagactcccaaggagacttaagaatg
gcagatggagtggccaatgttgagcacattctgaaagttggatatctaaatgacagagtg
gatgagcttttagaaaagtacatggactcttatgatattgttttagtacaagacgaatca
ttagaagtagccaactctattttacagaagattctataa

>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_3|140_aa
MRLIWKPSFSNALQCSFVHLEHSTASEAIGQCQSSAAKPRRSGKESVRQPWARVPGALEV
AASLGAVGVGTPVEAMSENLSVASGVSSVEKHGTMADGSNQPRPAGSSSRDHGSSNAAVL
SVTFGSTIPEKCTAATSQSA

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_3|423_bp
atgagactaatttggaaaccgtcattttcaaatgcacttcagtgcagttttgttcatttg
gaacattccactgcttctgaggcgatcgggcagtgtcagtcttcagctgctaagccgaga
agatctgggaaggagtcagtcagacagccttgggccagagttccaggggctctggaagta
gctgccagcttgggggcagtaggagtagggacccctgtggaagcaatgtcagagaatttg
tcagttgcctctggggtctccagtgtagagaaacatggaaccatggctgatgggagtaat
caaccaaggcctgcaggcagtagcagcagggaccatggcagcagcaatgcagcagtcctg
tcagttacctttgggagcaccatcccagagaaatgcacagctgccaccagccagagtgct
tag

>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_4|702_aa
MDKFLDTYTLPRLNQEEVDSLNKPIRGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VAFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKIVA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINIIQHINRTKDKNHMIISIDAEKAFDKI
QQTFMLKTLNKLGIDGTYLKIITAIYDKPTANIILNAQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQKKEIKGIQLGKAEVKLSLFADEMIVYLENPIVSAQSLLKLISNFSKV
SEYKINVQKSEGFLYTNNRQTESQIMTELPFTIASKRINYLGIQLTRDVKDLFKENYKPL
LNEIKEDTKKWENIPCSWAGRINIVKRAILPKVIYTFNAIPIKLPMTFFTELEKTTLKFI
WNQKRAHISESILSQKNKAGGTTLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIT
THIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAIRRKLKLDPFLTPYTKINSRWIKDLN
VRPKTIKTLEENLGITIQDTGIGKDFMSKTPKAMATKAKMDKRDLIKLKIFCTAKETTIR
VNMQPTKWEKIFTTYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRNFSKEDIYAA
KRHMKKCSPSLAIREMQIKTTVRYHLTPVRMAIIKKSGNNRC

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_4|2109_bp
atggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgactct
ctgaataaaccaataagaggctctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtagcattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatagtggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacgcaaatcaataaatataatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaaaccttcatgctaaaaactctcaataaattaggtattgatgggacatatctcaaa
ataataacagctatctatgacaaacccacagccaatatcatactgaatgcgcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaattaggcagaagaaggaaataaagggtatt
caattaggaaaagcagaagtcaaattgtccctgtttgcagatgagatgattgtatatcta
gaaaaccccattgtctcagcccaaagtctccttaagctgataagcaacttcagcaaagtc
tcagaatacaaaatcaatgtacaaaaatcagaaggattcttatacaccaataacagacaa
acagagagccaaatcatgactgaactcccattcacaattgcttcaaagagaataaactac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaatgaaataaaagaggatacaaagaagtgggagaacattccatgctcatgggcagga
agaatcaatatcgtgaaaagggccatactgcccaaggtaatttatactttcaatgccatc
cccattaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcccacatctctgagtcaatcctaagccaaaagaacaaagctgga
ggcaccacgctacctgacttcaaactatattacaaggctacagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacg
acacatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaag
gattccctatttaataaatggtgctgggaaaactggctagccatacgtagaaagctgaaa
ctggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaac
gttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacaca
ggcataggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaatg
gacaaacgggatctaattaaactaaagatcttctgcacagcaaaagaaactaccatcaga
gtaaacatgcaacctacaaaatgggagaaaattttcacaacctactcatctgacaaaggg
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaacccc
atcaaaaagtgggcaaaggatatgaacagaaacttctcaaaagaagacatttatgcagcc
aaaagacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaacc
acagtgagataccatctcacaccggttagaatggcaatcattaaaaagtcaggaaataac
aggtgctag

>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_5|135_aa
MDLKAKARELREECRSLRSRCDQLEERVSVMEDEMNEMKREGKFREKRIKRNEQSLQGIW
DYVKRPNLHLIGVPESDGENGTKLENTLQDIIQENFPNLERQANIQIQEIQRMPQRYSSR
RATPKHIIVRFTKLK

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_5|408_bp
atggacctgaaagccaaggctcgagaactacgtgaagaatgcagaagcctcaggagcaga
tgcgatcaactggaagaaagggtatcagtgatggaagatgaaatgaatgaaatgaagcga
gaagggaagtttagagaaaaaagaataaaaagaaatgaacaaagcctccaaggaatatgg
gactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgacggggagaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagaa
aggcaggccaacattcagattcaggaaatacagagaatgccacaaagatactcctcgaga
agagcaactccaaaacacataattgtcagattcacaaagttgaaatga

>gi568815594r:117475101_117676109|GENSCAN_predicted_peptide_6|456_aa
XYWFVFSSTAELKMSTAAPQSECYKQCSSSSASRSSSHYQINKIDRPLARLIKKKGEKNQ
IDAIKKDKGDITTNATDIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESL
NRPITGAEIVAIINGLSTKKSPGPDGFTAEFYQRTKDKNHMIISIDAEKAFDKIQQPFIV
KTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKAGTRQGCPLSPFLFNIVLEV
LARAIRQEKEIKGIQLGKEEAKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKIN
VQKSQAFLYTNNRQTQSQIMSELPFTIASKRINYLGIQLTRDVKDLFKENYKPLLNEIKE
DTKKWENIPCSWVGRFNYRENGHNAQGLISRIYNELKQIYKEKTNNPIKKWAKDMNSHFS
EEDIYAAKKYMKKCSPSLAVREMQIKTTMRYHLTPV

>gi568815594r:117475101_117676109|GENSCAN_predicted_CDS_6|1371_bp
ngttattggtttgtcttttcatccacagcagagctcaaaatgagcacagctgccccacag
agtgagtgctataagcaatgtagcagttcatctgcttcaagatcttcttcccactaccag
atcaacaaaattgatagaccactagcaagactaataaagaaaaaaggagagaagaatcaa
atagatgcaataaaaaaggataaaggggatatcaccaccaacgccacagatatacaaact
accatcagagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatg
gataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctg
aatagaccaataacaggagctgaaattgtggcaataatcaatggcttatcaaccaaaaaa
agtccaggaccagatggattcacagccgaattctaccagagaaccaaagacaaaaaccac
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatagta
aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
gctggcacaagacagggatgccctctctcaccattcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gccaaattgtccctgtttgcggacgacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctcctgaagttgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaataacagacaaacacagagtcaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaactacctaggaatccaacttaca
agggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagag
gatacaaagaaatgggagaacattccatgctcatgggtaggaagattcaattatcgtgaa
aatggccataatgcccaagggctaatatccagaatctacaatgaactcaaacaaatttac
aaggaaaaaacgaacaaccccatcaaaaagtgggcgaaggatatgaacagccacttctca
gaagaagacatttatgcagccaaaaaatacatgaaaaaatgctcaccatcactcgccgtc
agagaaatgcaaatcaaaaccacaatgagatatcatctcacaccagtgtga