GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:48:21

Sequence gi568815593r:173132572_173335083 : 202512 bp : 47.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11975  12058   84  1  0  115   84   115 0.940  14.62
 1.02 Intr +  14295  14387   93  2  0   70   94    27 0.714   1.66
 1.03 Intr +  21751  21842   92  0  2   74   96    73 0.975   5.49
 1.04 Intr +  27362  27480  119  2  2   97   71   156 0.999  14.91
 1.05 Term +  31154  31350  197  0  2   94   50   290 0.982  23.37
 1.06 PlyA +  31765  31770    6                               1.05

 2.05 PlyA -  31782  31777    6                               1.05
 2.04 Term -  42896  42782  115  1  1   40   43    97 0.299  -1.56
 2.03 Intr -  45032  44925  108  1  0   66   99    45 0.494   2.80
 2.02 Intr -  51407  51253  155  2  2   83  102    67 0.172   6.47
 2.01 Init -  61126  61052   75  1  0   80   79    31 0.021   2.49
 2.00 Prom -  72610  72571   40                              -5.36

 3.03 PlyA -  73147  73142    6                              -0.45
 3.02 Term -  73365  73215  151  2  1   84   43   141 0.944   6.58
 3.01 Init -  76215  76145   71  0  2   49   78    63 0.707   1.92
 3.00 Prom -  76379  76340   40                              -2.16

 4.00 Prom +  80155  80194   40                              -7.76
 4.01 Sngl +  81128  81310  183  1  0   97   48   215 0.488  11.66
 4.02 PlyA +  81704  81709    6                               1.05

 5.10 PlyA -  85990  85985    6                               1.05
 5.09 Term -  93447  93265  183  0  0   62   36   226 0.987  12.34
 5.08 Intr -  96408  96016  393  0  0   32   65   135 0.278   0.45
 5.07 Intr -  97393  97191  203  2  2   98   60   116 0.941   8.80
 5.06 Intr -  99060  98893  168  1  0  -21   65   140 0.079   0.72
 5.05 Intr - 100638 100015  624  1  0  103   23  1145 0.124 101.72
 5.04 Intr - 102654 102179  476  2  2   80  100   362 0.041  29.31
 5.03 Intr - 120032 119939   94  0  1  140  100    20 0.516   7.42
 5.02 Intr - 125707 125581  127  1  1   66   79    75 0.491   4.65
 5.01 Init - 135148 135065   84  1  0   65   90    52 0.727   3.92
 5.00 Prom - 136471 136432   40                              -4.16

 6.00 Prom + 144714 144753   40                              -6.16
 6.01 Init + 145224 145272   49  2  1   83  115    22 0.706   5.54
 6.02 Intr + 151308 151488  181  1  1   67   54   177 0.161  11.13
 6.03 Term + 158278 158467  190  1  1   95   47    58 0.072  -0.68
 6.04 PlyA + 158871 158876    6                              -0.45

 7.07 PlyA - 160576 160571    6                               1.05
 7.06 Term - 161401 161214  188  2  2   62   37    62 0.379  -3.85
 7.05 Intr - 161933 161857   77  1  2  100  131    63 0.966  10.96
 7.04 Intr - 162133 161986  148  2  1   50   44   110 0.974   2.09
 7.03 Intr - 162737 162603  135  0  0  107   51    82 0.981   6.94
 7.02 Intr - 165177 165064  114  1  0   59   76    48 0.286   1.12
 7.01 Init - 172551 172488   64  0  1   84   88    62 0.839   7.11
 7.00 Prom - 179598 179559   40                              -5.56

 8.10 PlyA - 181935 181930    6                               1.05
 8.09 Term - 185678 185276  403  1  1  107   44   396 0.940  31.73
 8.08 Intr - 186585 186514   72  2  0   59   53    86 0.613   0.72
 8.07 Intr - 190859 190648  212  2  2  108   72   249 0.736  23.01
 8.06 Intr - 193439 193297  143  0  2   77   98   126 0.968  12.57
 8.05 Intr - 195011 194851  161  1  2   58   16   100 0.483  -0.57
 8.04 Intr - 195220 195045  176  1  2   73   61   165 0.822  11.04
 8.03 Intr - 195896 195724  173  0  2   40  -17   156 0.754  -0.04
 8.02 Intr - 196186 196050  137  0  2   50   57    90 0.810   2.31
 8.01 Init - 198930 198887   44  0  2   91  100    50 0.698   6.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100638  99998  641  1  2  103   50  1143 0.826 106.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_1|194_aa
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQD
LEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQ
QSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLA
TVLYIVKKRLFPFL

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_1|585_bp
atggcggctccccaagacgtccacgtccggatctgtaaccaagagattgtcaaatttgac
ctggaggtgaaggcgcttattcaggatatccgtgattgttcaggacccttaagtgctctt
actgaactgaatactaaagtaaaagagaaatttcaacagttgcgtcacagaatacaggac
ctggagcagttggctaaagagcaagacaaagaatcagagaaacaacttctactccaggaa
gtggagaatcacaaaaagcagatgctcaggaaaaccaccaaagagagcctggcccagaca
tccagtaccatcactgagagcctcatggggatcagcaggatgatggcccagcaggtccag
cagagcgaggaggccatgcagtctctagtcacttcttcacgaacgatcctggatgcaaat
gaagaatttaagtccatgtcgggcaccatccagctgggccggaagcttatcacaaaatac
aatcgccgggagctgacggacaagcttctcatcttccttgcgctagccctgtttcttgct
acggtcctctatattgtgaaaaagcggctctttccatttttgtga

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_2|150_aa
MDTDVDLHSIGGMSKDLQPRFKTTTGGHWRILKEAMACASEREGLTQGTNLNEESPAALG
PVRSCQNDPSKAQGGPSHQWPFHMDLLQMTSLAEGPGGRDMTPFSQPSSQSVRNWVALQE
VSRQRALPPELYPLSDQQRHEILIGARTLL

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_2|453_bp
atggacacagacgtagacctgcactccataggaggaatgtcaaaggatttgcagccacgt
tttaaaaccaccacaggaggccactggagaattctcaaggaggccatggcatgtgcctct
gaaagagaggggctgacgcagggcaccaacttgaatgaggaaagtccggctgcattgggc
ccagtcagaagctgccagaatgacccaagcaaggcacagggaggcccaagccaccagtgg
cctttccacatggacttgctgcaaatgaccagtctggctgagggccctgggggccgggac
atgacacccttctctcagccctcatcacagtctgtgaggaactgggtggccctgcaggag
gtcagccgccagcgagcattaccgcctgagctctacccactgtcggatcagcagcggcat
gagattctcataggagcgagaaccctattgtga

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_3|73_aa
MEQLEEDLRREFKTEGAARAKALRNRRGFVLSCASEERHPLRGHWMPHAFDVKVPFENGP
TLYQQVPETPPGY

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_3|222_bp
atggagcagctggaggaagatctgagaagagagtttaagacagagggagcagctcgtgca
aaggccctgagaaacaggagaggtttcgtcctgagctgtgcaagtgaggagcgtcaccct
ctgagagggcactggatgccacacgctttcgatgtcaaggtcccttttgaaaatggccct
actctgtaccaacaagttccagagacaccaccaggctactaa

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_4|60_aa
MPEPAPDAVGSCAAPASPTSAAPCSTAPGPIDCPRAEECRRKHHGTGRQLRLRPGSRTTE

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_4|183_bp
atgcctgagcctgcccctgacgccgtgggctcctgcgcggccccagcctccccgacgagc
gccgccccctgctccacggcgcccggtcccatcgactgcccaagggctgaggagtgccgg
cgcaagcaccacgggactggcaggcagctccgcctgcggcccgggtccaggaccactgag
tga

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_5|783_aa
MSISVKAKHKPHKSLSPKLEVVNGWETEHPHGANQDEPDPRQTTQSKQRTQSLFSTSMAQ
QLEISTVSSTGEAPRAAKEREAEKKWAGEPLSGAPRYGGRSSATCCPDTSRAGRRVRGRA
AAPCREAARGRGQRRFLPPTWRCETGAATMFPSPALTPTPFSVKDILNLEQQQRSLAAAG
ELSARLEATLAPSSCMLAAFKPEAYAGPEAAAPGLPELRAELGRAPSPAKCASAFPAAPA
FYPRAYSDPDPAKDPRAEKKELCALQKAVELEKTEADNAERPRARRRRKPRVLFSQAQVY
ELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPP
PPPARRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNPYGYNAYPAYPGYGGAACSPGYSCT
AAYPAGPSPAQPATAAANNNFVNFGVGDLNAVQSPGIPQSNSGVSTLHACFQMEKPRTQA
LGKRSQAPQMPPDATSGPHQLPVGLSAEAGPQRGVLRMVLTSSCDRETEEVTWVVKIIQS
LSGNGSWETHRTHTGESVPEARARHTVDVSPVKMQTEWLQAALSRTQTLASGDARKPQVS
PLTRKHHAVPRGSSTVFPAAPAPRILREAFRAQAQRFYAAGNSLVASKPCRLPYQAELLE
KGACGLPLIYHSQSLSRARHCSELFTSEPIESLFIPLGYREETDEGFILNPERRSTLPRV
TQLVNSEDKRALAKLVEAIRTNYNDKYDEIHRHWGGSVLGPKSVVHIAKLEKAKAKELAT
KLG

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_5|2352_bp
atgagtatttcagtgaaagcaaaacataagccgcacaaatctctgagccccaaactcgaa
gttgtaaatggttgggagactgagcatccacacggtgcaaatcaagatgaaccagatccc
cggcagaccacacagtccaagcaaaggacgcagtcattgtttagcacatccatggctcag
cagttggaaatatccaccgtctccagcacaggagaagccccacgagcagcgaaggaaaga
gaagcagaaaaaaagtgggcaggtgaacctttgtcaggggcaccccgctacggaggaagg
tcaagcgctacctgctgcccggacacatccagagctggccgacgggtgcgcgggcgggcg
gcggcaccatgcagggaagctgccaggggccgtgggcagcgccgctttctgccgcccacc
tggcgctgtgagactggcgctgccaccatgttccccagccctgctctcacgcccacgccc
ttctcagtcaaagacatcctaaacctggaacagcagcagcgcagcctggctgccgccgga
gagctctctgcccgcctggaggcgaccctggcgccctcctcctgcatgctggccgccttc
aagccagaggcctacgctgggcccgaggcggctgcgccgggcctcccagagctgcgcgca
gagctgggccgcgcgccttcaccggccaagtgtgcgtctgcctttcccgccgcccccgcc
ttctatccacgtgcctacagcgaccccgacccagccaaggaccctagagccgaaaagaaa
gagctgtgcgcgctgcagaaggcggtggagctggagaagacagaggcggacaacgcggag
cggccccgggcgcgacggcggaggaagccgcgcgtgctcttctcgcaggcgcaggtctat
gagctggagcggcgcttcaagcagcagcggtacctgtcggcccccgaacgcgaccagctg
gccagcgtgctgaaactcacgtccacgcaggtcaagatctggttccagaaccggcgctac
aagtgcaagcggcagcggcaggaccagactctggagctggtggggctgcccccgccgccg
ccgccgcctgcccgcaggatcgcggtgccagtgctggtgcgcgatggcaagccatgccta
ggggactcggcgccctacgcgcctgcctacggcgtgggcctcaatccctacggttataac
gcctaccccgcctatccgggttacggcggcgcggcctgcagccctggctacagctgcact
gccgcttaccccgccgggccttccccagcgcagccggccactgccgccgccaacaacaac
ttcgtgaacttcggcgtcggggacttgaatgcggttcagagccccgggattccgcagagc
aactcgggagtgtccacgctgcatgcctgtttccagatggaaaagccaagaacccaagcc
cttggcaagcgttctcaggctcctcagatgcccccagatgccacgtcggggcctcatcag
ctgcccgtgggactgagtgccgaggctggaccccagagaggtgtcctgcggatggtgctc
acctccagctgtgaccgggaaactgaggaggttacgtgggtggtcaagatcatccagtct
ctaagcgggaacgggagctgggaaacacacaggacacatactggggagagtgttcctgaa
gccagagcccgccacactgtggatgtctctccagtaaagatgcagacagaatggctccag
gccgcgctgagcagaacccagactcttgccagtggggacgcgcggaagccgcaggtttca
ccgctgactcggaaacatcacgcggtcccgcgcgggagtagcaccgtcttccccgcagcg
cccgcccctcgcatcctccgggaagcattccgagctcaggcccagcgcttctacgccgca
ggcaacagccttgtggcctctaagccttgccgactcccctaccaggctgagctcctggag
aaaggggcctgtggcctgcctttaatttatcactcacagagtttatcgcgtgccaggcac
tgttctgagctctttacaagtgaacccattgaatccctttttatacctctgggttatcgt
gaggaaacagatgaaggattcattttaaacccagaaagaaggagtacgttgcccagggtc
acacagctggttaactcagaagacaaaagagctttggctaagctggtggaagctatcagg
accaattacaacgacaaatatgatgagatccaccgtcactggggaggcagtgtcctgggt
cccaagtctgtggttcacatcgccaagcttgaaaaggcaaaggctaaagaacttgccacc
aaactgggttaa

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_6|139_aa
MLNLCNFFSSTVCGSDAALQEPARRQREGETGRHVLTRRPPEPALPAGCARMPADAELLP
PCGLVRGLLLLTGGASRPLIALEQRDDSLIINFTKIEVGLCQQSPLTVTQMRLFALHGGK
GQLGKKKKERKKKAGVVPA

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_6|420_bp
atgctcaacctgtgcaacttcttttcaagtacagtgtgtggatcggatgcggcgctgcag
gaaccagcccgccgccagcgcgaaggtgagaccgggcgccacgtgcttacccggcggcct
ccggaaccagccctgcccgccggctgtgcgcggatgcctgcagacgccgagctgctgccc
ccgtgtggcctggtgcgggggctcctcctgctcactgggggcgcgtcccggcccctaatt
gctctggagcagagggatgacagcctaattattaacttcacaaaaattgaagttgggctg
tgtcaacaaagtccactcactgtcacccagatgcgactctttgcccttcatggtggcaaa
gggcagttaggaaaaaaaaagaaagaaagaaagaaaaaggctggcgtggttccagcttaa

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_7|241_aa
MPPSKVEMVIPTLQIKKQTLRGQGTHGGEAAGAGSGGLPEKAVVFDGLHRKQIQDRKLQD
EDSDIPETMNLQRPGSIQVSMATLTSFSLAPEPTCPPRHPLYLAEYTRSTDPMQPIQYWK
LSTNKAPREGSEEDDSANGHRENRELTAPSQQADPEERSILQTRGLTLRSKATCHNRITA
RSVGGGNRRGRLPFITWWLPGHILYKPGPALSLPQSLSVPLPSNSGESTFKTVLDAVASR
L

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_7|726_bp
atgccccccagtaaggtggaaatggttattcctactttacagatcaagaaacagactctc
agaggccaggggactcacggtggggaggcagctggagctggcagtggaggcctgcccgag
aaggcagtggtcttcgatgggcttcacaggaaacagattcaagacagaaaattgcaagat
gaggattcagacatcccagagaccatgaacctccagaggcctgggagcatccaggtctca
atggccacactgacatccttcagcttggcacctgagcccacttgcccaccccgacatcct
ttgtacctggcagagtacacccgctcaactgatccaatgcaaccaatacagtattggaag
ctttctacgaacaaggcacccagagagggctcggaggaagatgacagtgccaacgggcac
agggagaatcgtgagcttactgcaccttcccagcaggcagaccccgaggaacggtccatt
ctacagacaagaggcctgacgctcagaagcaaagcaacttgccacaatcgcatcaccgcc
cgctctgtcggtggaggaaatagacgtggaaggcttcccttcatcacctggtggctgccg
ggccacatcctgtacaagccggggccagctctaagtctaccccaaagcctcagcgtgcct
cttccctctaactcaggcgaaagtaccttcaagacagtcctggacgcggtggcttcacgc
ctgtaa

>gi568815593r:173132572_173335083|GENSCAN_predicted_peptide_8|506_aa
MGSRRQPQKALDDTSNWSLDSLLYCTVLSTIALEHPHTRTHLRPRSHTLIHTHANAWPPP
VTPELPGIFEAPSLPLPGTRGAANGLVTCSPESYGRALGNLYPSRGREEEGKGEQKGRGR
GEMKQRLTLPAPAPAPESRVRCKARFIPAGTREAQRVPGAGLRPAPGELLFLACRPQCPT
SQNFAGETNGIANFPPGGTAFGREREGSAKRTSAVLPPSPAPGQVSKPRNAEIQHCLVNA
GDVGCGVFECFENNSCEIRGLHGICMTFLHNAGKFDAQGKSFIKDALKCKAHALRHRFGC
ISRKCPAIREMVSQLQRECYLKHDLCAAAQENTRVIVEMIHFKDLLLHETTQDNRNGLRN
WLCPPELGEFIAQPYVDLVNLLLTCGEEVKEAITHSVQVQCEQNWGSLCSILSFCTSAIQ
KPPTAPPERQPQVDRTKLSRAHHGEAGHHLPEPSSRETGRGAKGERGSKSHPNAHARGRV
GGLGAQGPSGSSEWEDEQSEYSDIRR

>gi568815593r:173132572_173335083|GENSCAN_predicted_CDS_8|1521_bp
atgggctccaggcgtcaaccacagaaggccctggatgacacaagcaactggagcttggat
tcgctcttatattgtacagtcctttcgaccattgccctggagcacccgcacacgcgcacg
catctccggccgcgctcacacacactcatacacacgcacgcaaacgcgtggccgccgcca
gtgacaccagagcttccagggatatttgaggcaccatccctgccattgccgggcactcgc
ggcgctgctaacggcctggtcacatgctctccggagagctacgggagggcgctgggtaac
ctctatccgagccgcggccgcgaggaggagggaaaaggcgagcaaaaaggaagaggtcga
ggggaaatgaagcagcgtctgacgctgccagcgccagcccccgcccccgaatcccgggtc
cggtgcaaagcgcgcttcatcccggccggcacgcgggaggcccagagggtccccggagct
gggctgcgccctgcgcccggagaacttctcttcctggcctgccggcctcaatgcccgaca
tcccagaactttgccggcgagacaaatggcattgcgaactttccccctgggggcactgct
ttcggaagggagcgtgagggcagcgcaaagcgtacctccgcggtgctgccgccatcccca
gctcctggccaggtcagcaagccaagaaatgcggagatccagcactgtttggtcaacgct
ggcgatgtggggtgtggcgtgtttgaatgtttcgagaacaactcttgtgagattcggggc
ttacatgggatttgcatgacttttctgcacaacgctggaaaatttgatgcccagggcaag
tcattcatcaaagacgccttgaaatgtaaggcccacgctctgcggcacaggttcggctgc
ataagccggaagtgcccggccatcagggaaatggtgtcccagttgcagcgggaatgctac
ctcaagcacgacctgtgcgcggctgcccaggagaacacccgggtgatagtggagatgatc
catttcaaggacttgctgctgcacgaaacaacccaagacaaccggaatggcctgaggaac
tggctctgccctccagaactaggcgagttcattgcacaaccctacgtggacctcgtgaac
ttgctgctgacctgtggggaggaggtgaaggaggccatcacccacagcgtgcaggttcag
tgtgagcagaactggggaagcctgtgctccatcttgagcttctgcacctcggccatccag
aagcctcccacggcgccccccgagcgccagccccaggtggacagaaccaagctctccagg
gcccaccacggggaagcaggacatcacctcccagagcccagcagtagggagactggccga
ggtgccaagggtgagcgaggtagcaagagccacccaaacgcccatgcccgaggcagagtc
gggggccttggggctcagggaccttccggaagcagcgagtgggaagacgaacagtctgag
tattctgatatccggaggtga