Result of FASTA (omim) for pF1KB6454
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6454, 350 aa
  1>>>pF1KB6454 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8213+/-0.000394; mu= 12.9303+/- 0.024
 mean_var=65.1167+/-13.182, 0's: 0 Z-trim(112.0): 14  B-trim: 38 in 1/49
 Lambda= 0.158938
 statistics sampled from 20778 (20790) to 20778 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.244), width:  16
 Scan time:  7.340

The best scores are:                                      opt bits E(85289)
NP_068596 (OMIM: 605778) NIF3-like protein 1 isofo ( 350) 2279 531.6  1e-150
NP_001135827 (OMIM: 605778) NIF3-like protein 1 is ( 350) 2279 531.6  1e-150
XP_011509887 (OMIM: 605778) PREDICTED: NIF3-like p ( 350) 2279 531.6  1e-150
XP_011509884 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_011509885 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_005246799 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_011509886 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
NP_001129511 (OMIM: 605778) NIF3-like protein 1 is ( 377) 2279 531.6 1.1e-150
XP_016860119 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
NP_001135828 (OMIM: 605778) NIF3-like protein 1 is ( 285) 1421 334.8 1.4e-91


>>NP_068596 (OMIM: 605778) NIF3-like protein 1 isoform 2  (350 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.9  bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
              310       320       330       340       350

>>NP_001135827 (OMIM: 605778) NIF3-like protein 1 isofor  (350 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.9  bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
              310       320       330       340       350

>>XP_011509887 (OMIM: 605778) PREDICTED: NIF3-like prote  (350 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.9  bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
              310       320       330       340       350

>>XP_011509884 (OMIM: 605778) PREDICTED: NIF3-like prote  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
XP_011 KINIILSETDRDPLQVV
              370       

>>XP_011509885 (OMIM: 605778) PREDICTED: NIF3-like prote  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
XP_011 KINIILSETDRDPLQVV
              370       

>>XP_005246799 (OMIM: 605778) PREDICTED: NIF3-like prote  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
XP_005 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
XP_005 KINIILSETDRDPLQVV
              370       

>>XP_011509886 (OMIM: 605778) PREDICTED: NIF3-like prote  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
XP_011 KINIILSETDRDPLQVV
              370       

>>NP_001129511 (OMIM: 605778) NIF3-like protein 1 isofor  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
NP_001 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
NP_001 KINIILSETDRDPLQVV
              370       

>>XP_016860119 (OMIM: 605778) PREDICTED: NIF3-like prote  (377 aa)
 initn: 2279 init1: 2279 opt: 2279  Z-score: 2826.4  bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
XP_016 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
              250       260       270       280       290       300

           280       290       300       310       320       330   
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
              310       320       330       340       350       360

           340       350
pF1KB6 KINIILSETDRDPLQVV
       :::::::::::::::::
XP_016 KINIILSETDRDPLQVV
              370       

>>NP_001135828 (OMIM: 605778) NIF3-like protein 1 isofor  (285 aa)
 initn: 1442 init1: 1421 opt: 1421  Z-score: 1765.2  bits: 334.8 E(85289): 1.4e-91
Smith-Waterman score: 1421; 99.5% identity (99.5% similar) in 217 aa overlap (1-217:28-244)

                                          10        20        30   
pF1KB6                            MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
                                  :::::::::::::::::::::::::::::::::
NP_001 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
               10        20        30        40        50        60

            40        50        60        70        80        90   
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
              190       200       210       220       230       240

           220       230       240       250       260       270   
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
       :: :                                                        
NP_001 EKSLKSKSWPCVLVLGAAFCRVLRLTFTSQVRCPIMILWMLLPKE               
              250       260       270       280                    




350 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:01:21 2016 done: Fri Nov  4 23:01:22 2016
 Total Scan time:  7.340 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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