GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:30:28

Sequence gi568815596r:177130788_177364576 : 233789 bp : 40.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    682    801  120  0  0   40   50   185 0.867   7.39
 1.02 PlyA +   1002   1007    6                               1.05

 2.00 Prom +   5290   5329   40                              -6.45
 2.01 Init +  12332  12373   42  1  0   82   95    30 0.164   3.57
 2.02 Intr +  18259  18355   97  0  1   51   65    75 0.007   0.16
 2.03 Intr +  34459  34668  210  2  0  103   41    87 0.002   3.46
 2.04 Term +  39831  39943  113  1  2  102   49    73 0.281   2.54
 2.05 PlyA +  40261  40266    6                               1.05

 3.00 Prom +  45935  45974   40                              -7.55
 3.01 Init +  47193  47426  234  2  0   99   26   340 0.466  27.09
 3.02 Intr +  48220  48306   87  0  0  117  103    32 0.563   6.85
 3.03 Intr +  52267  52333   67  0  1   87   72    58 0.402   1.66
 3.04 Term +  56973  57100  128  1  2   89   45    57 0.250  -1.04
 3.05 PlyA +  57610  57615    6                               1.05

 4.00 Prom +  63300  63339   40                              -5.95
 4.01 Sngl +  67242  67766  525  2  0   77   47   686 0.997  59.20
 4.02 PlyA +  68261  68266    6                               1.05

 5.00 Prom +  70159  70198   40                              -5.75
 5.01 Init +  82506  82631  126  2  0   76   57   110 0.017   4.91
 5.02 Intr +  84752  84874  123  1  0   77  103   136 0.956  13.86
 5.03 Intr +  84963  85109  147  2  0   87   53   116 0.991   7.51
 5.04 Intr +  85191  85401  211  2  1   69  111   169 0.998  14.86
 5.05 Intr +  85889  85984   96  0  0   61   80    86 0.924   4.16
 5.06 Intr +  86073  86153   81  1  0  116   78   114 0.952  11.89
 5.07 Intr +  86918  87058  141  0  0   91   91   155 0.999  15.50
 5.08 Intr +  88250  88372  123  0  0   67  103    97 0.996   8.74
 5.09 Term +  98684  98805  122  0  2   28   48   124 0.108   0.06
 5.10 PlyA +  99269  99274    6                               1.05

 6.07 PlyA -  99368  99363    6                               1.05
 6.06 Term - 101221  99998 1224  1  0   59   33   910 0.978  73.22
 6.05 Intr - 101796 101605  192  0  0   63   93   164 0.782  13.17
 6.04 Intr - 102552 102463   90  0  0   81   78    84 0.983   5.97
 6.03 Intr - 103484 103218  267  2  0   70   92   314 0.149  26.81
 6.02 Intr - 133942 133745  198  1  0  -28   53   272 0.338  10.73
 6.01 Init - 143356 143351    6  1  0   53  113    10 0.209   0.36
 6.00 Prom - 148052 148013   40                              -2.35

 7.00 Prom + 148475 148514   40                              -2.95
 7.01 Init + 153974 153985   12  1  0   86   90    -1 0.018   0.11
 7.02 Intr + 165575 165742  168  1  0   79   91    76 0.478   6.22
 7.03 Term + 189496 189606  111  0  0   75   38   117 0.583   2.98
 7.04 PlyA + 189623 189628    6                               1.05

 8.05 PlyA - 192348 192343    6                               1.05
 8.04 Term - 194012 193892  121  1  1  118   48    65 0.054   2.47
 8.03 Intr - 203742 203606  137  0  2  138   91   -18 0.028   1.95
 8.02 Intr - 217107 217063   45  0  0   50   92    75 0.107   1.79
 8.01 Init - 229750 229667   84  1  0   68   85    48 0.282   3.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 103481 103218  264  2  0   69   92   306 0.848  26.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_1|39_aa
NAGGKSESRQTSPEVTTGIQEQDGGKLDLGDDSEDQQSL

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_1|120_bp
aatgcaggtggcaaaagtgaaagcaggcagaccagtccagaagtgactacggggatccag
gaacaagatggtgggaagctggacttgggtgatgacagcgaggatcaacaaagcctgtga

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_2|153_aa
MQKDLINLLAIDIMLFQDLRPAETRRGSRPGRHLVDSIDLGESSTRASAFFFRPQTLQDF
AFLILSFPLLVQANTVLPDSSMAAEAVGRSPRPARQNARNIAHFRKRWLLDKRAANILGN
WVRICVSNGIVTVTLVRFGIRSKNKPETSLCIR

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_2|462_bp
atgcagaaagatcttatcaatctattggcaattgacattatgctgttccaagatttgcgc
ccagcggagacgagacgcggcagtagacctgggcgccacctagtggattctattgacctg
ggggagtcgtcaacgcgtgcttcagctttcttcttccgaccacagactctccaagatttt
gcttttctcatcctatccttccctcttcttgtacaagcgaacactgtccttccagactct
tccatggctgcagaagctgtagggaggagccctcggccagccagacaaaatgcacgtaat
attgctcactttaggaaaagatggctcctggacaaacgagcagcaaacatcctaggaaat
tgggtcagaatctgcgtatctaatgggatcgttactgttacacttgtaagatttggaatc
cgttcaaaaaacaagccagaaacaagcctttgtatacgttag

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_3|171_aa
MDELFSQVDEKRKKYDIPKYLCCKISFELMRELCITPTGISYDRKDIEEHLQRVDHFDPV
TWSPLTQKQFIPNLAMKEAGEKAWGSLSHGSPILIPVLVETQSNLRQHPFPPELPFPKLL
LDVQELPYPGQSSSRVWLTPSFLHCIIRIPQQSFGKPDTMLSSVVFHPSLK

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_3|516_bp
atggatgagctcttctctcaggtggacgagaagaggaagaagtacgacatccccaaatac
ctgtgctgtaagatcagttttgagctgatgcgggagctatgcatcacgcccactggcatc
tcctatgaccgcaaggacatcgaggagcacctgcagcgcgtggatcattttgaccctgtg
acctggagccccctaacccagaaacagttcatccccaacctggccatgaaggaggctggt
gaaaaagcctggggcagtttgagtcatggatcccccattttgattcctgttttggtggaa
acacaaagtaacctaaggcagcacccgtttccaccagagctccctttccccaagcttctt
cttgatgttcaggaattgccctacccaggccaaagttcatcccgagtgtggttaacaccc
agctttctgcattgcatcatccggatccctcagcagtcatttgggaagccagataccatg
ctctctagtgtggtgtttcatccaagtctcaagtga

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_4|174_aa
MNRNISWLQAEIEGLKGQKASLEAAVADAEQRGELAIKDANAKLSELEAALQRAKQDMAW
QLHEYQELMNIKLALDMEIATYRKLLEGKDSRLESGMQNMSIHTKTTSSYAGGLSSAYGG
LTSPSLSYGLGSSFGSGVGSSSFSHSSSTRAVVVKKIQTRNGKLVSESSDVLRK

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_4|525_bp
atgaaccggaacatcagctggctccaggctgagattgagggtctcaaaggccagaaggct
tccctggaggccgccgtcgcagatgctgagcagcgtggggagctggccattaaggatgcc
aacgccaagctgtccgagctggaggcggccctgcagcgggccaagcaagacatggcatgg
cagttgcatgagtaccaggagctgatgaacatcaagctggccctggatatggagatcgcc
acctacaggaagctgctggagggcaaggacagccggctggagtctgggatgcagaacatg
agtatccatacgaagaccaccagcagctatgcaggtggtctgagctcggcctatgggggc
ctcacaagccccagcctcagctacggcctgggctccagctttggctctggcgtgggctcc
agctccttcagccacagcagctccaccagggccgtggttgtgaagaagatacagacccgc
aatgggaagctggtgtccgagtcttctgacgtcctgcgcaagtga

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_5|389_aa
MAHWPAMAAASLCRRESEPGIGGKRAEAARQKKPQMASKHGEGHDPKEPEQLRKLFIGGL
SFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDG
RVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQ
SGKKRGFAFVTFDDHDTVDKIVGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGG
GGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGY
NEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGAEMASPAATTV
LTVAAAQLLSPPSGLVQPPATNYTPLPES

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_5|1170_bp
atggcgcattggcccgcaatggccgccgcctcgctctgccgccgggaaagcgagcctggg
attggagggaagagggcggaggcggcccggcagaaaaagccgcaaatggcctcgaagcat
ggggagggccatgatccaaaggaaccagagcagttgagaaaactgtttattggtggtctg
agctttgaaactacagatgatagtttacgagaacattttgagaaatggggcacactcaca
gattgtgtggtaatgagagacccccaaacaaaacgttccaggggctttggttttgtgact
tattcttgtgttgaagaggtggatgcagcaatgtgtgctcgaccacacaaggttgatggg
cgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggtgcccat
ctaacagtgaagaaaatttttgttggtggtattaaagaagatacagaagaatataatttg
agagactactttgaaaagtatggcaagattgaaaccatagaagttatggaagacaggcag
agtggaaaaaagagaggatttgcttttgtaacttttgatgatcatgatacagttgataaa
attgttggtcgtggaggtggatctggcaattttatgggtcgcggagggaactttggaggt
ggtggaggtaattttggccgtggtggaaactttggtggaagaggaggctatggtggtgga
ggtggtggcagcagaggtagttatggaggaggtgatggtggatataatggatttggaggt
gatggtggcaactatggcggtggtcctggttatagtagtagagggggctatggtggtggt
ggaccaggatatggaaaccaaggtggtggatatggtggaggtggaggatatgatggttac
aatgaaggaggaaattttggcggtggtaactatggtggtggtgggaactataatgatttt
ggaaattatagtggacaacagcaatcaaattatggacccatgaaagggggcagttttggt
ggaagaagctcgggcagtccctatggtgcagaaatggccagtccagctgccaccactgta
ctgaccgtggctgcagctcagcttctttcacctccatctggattggtacagccacctgcc
actaactacactcctttaccagaaagctag

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_6|658_aa
MKPITECRGARRSRRRSRHRRRRRHQSRPVRAAPRQPEQGRRRGAPTHGPQLIMMDLELP
PPGLPSQQDMDLIDILWRQDIDLGVSREVFDFSQRRKEYELEKQKKLEKERQEQLQKEQE
KAFFAQLQLDEETGEFLPIQPAQHIQSETSGSANYSQVAHIPKSDALYFDDCMQLLAQTF
PFVDDNEVSSATFQSLVPDIPGHIESPVFIATNQAQSPETSVAQVAPVDLDGMQQDIEQV
WEELLSIPELQCLNIENDKLVETTMVPSPEAKLTEVDNYHFYSSIPSMEKEVGNCSPHFL
NAFEDSFSSILSTEDPNQLTVNSLNSDATVNTDFGDEFYSAFIAEPSISNSMPSPATLSH
SLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPEHSVESSSYG
DTLLGLSDSEVEELDSAPGSVKQNGPKTPVHSSGDMVQPLSPSQGQSTHVHDAQCENTPE
KELPVSPGHRKTPFTKDKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVDFNEMMSK
EQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIVELEQDLDHLKDEKEKLLKEKGEND
KSLHLLKKQLSTLYLEVFSMLRDEDGKPYSPSEYSLQQTRDGNVFLVPKSKKPDVKKN

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_6|1977_bp
atgaagccgattaccgagtgccggggagcccggaggagccgccgacgcagccgccaccgc
cgccgccgccgccaccagagccgccctgtccgcgccgcgcctcggcagccggaacagggc
cgccgtcggggagccccaacacacggtccacagctcatcatgatggacttggagctgccg
ccgccgggactcccgtcccagcaggacatggatttgattgacatactttggaggcaagat
atagatcttggagtaagtcgagaagtatttgacttcagtcagcgacggaaagagtatgag
ctggaaaaacagaaaaaacttgaaaaggaaagacaagaacaactccaaaaggagcaagag
aaagcctttttcgctcagttacaactagatgaagagacaggtgaatttctcccaattcag
ccagcccagcacatccagtcagaaaccagtggatctgccaactactcccaggttgcccac
attcccaaatcagatgctttgtactttgatgactgcatgcagcttttggcgcagacattc
ccgtttgtagatgacaatgaggtttcttcggctacgtttcagtcacttgttcctgatatt
cccggtcacatcgagagcccagtcttcattgctactaatcaggctcagtcacctgaaact
tctgttgctcaggtagcccctgttgatttagacggtatgcaacaggacattgagcaagtt
tgggaggagctattatccattcctgagttacagtgtcttaatattgaaaatgacaagctg
gttgagactaccatggttccaagtccagaagccaaactgacagaagttgacaattatcat
ttttactcatctataccctcaatggaaaaagaagtaggtaactgtagtccacattttctt
aatgcttttgaggattccttcagcagcatcctctccacagaagaccccaaccagttgaca
gtgaactcattaaattcagatgccacagtcaacacagattttggtgatgaattttattct
gctttcatagctgagcccagtatcagcaacagcatgccctcacctgctactttaagccat
tcactctctgaacttctaaatgggcccattgatgtttctgatctatcactttgcaaagct
ttcaaccaaaaccaccctgaaagcacagcagaattcaatgattctgactccggcatttca
ctaaacacaagtcccagtgtggcatcaccagaacactcagtggaatcttccagctatgga
gacacactacttggcctcagtgattctgaagtggaagagctagatagtgcccctggaagt
gtcaaacagaatggtcctaaaacaccagtacattcttctggggatatggtacaacccttg
tcaccatctcaggggcagagcactcacgtgcatgatgcccaatgtgagaacacaccagag
aaagaattgcctgtaagtcctggtcatcggaaaaccccattcacaaaagacaaacattca
agccgcttggaggctcatctcacaagagatgaacttagggcaaaagctctccatatccca
ttccctgtagaaaaaatcattaacctccctgttgttgacttcaacgaaatgatgtccaaa
gagcagttcaatgaagctcaacttgcattaattcgggatatacgtaggaggggtaagaat
aaagtggctgctcagaattgcagaaaaagaaaactggaaaatatagtagaactagagcaa
gatttagatcatttgaaagatgaaaaagaaaaattgctcaaagaaaaaggagaaaatgac
aaaagccttcacctactgaaaaaacaactcagcaccttatatctcgaagttttcagcatg
ctacgtgatgaagatggaaaaccttattctcctagtgaatactccctgcagcaaacaaga
gatggcaatgttttccttgttcccaaaagtaagaagccagatgttaagaaaaactag

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_7|96_aa
MGIERFCEELEGKLGSCRHEALMFSTGLLSTGCLLNAQHFGVYQRSKDMAPAFKEHFIQL
EIIEEHIDKMSKRSKQLKYGANTWKKTVRRFIHTHS

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_7|291_bp
atggggattgagagattctgtgaggagctggaaggcaagcttggttcatgcagacatgag
gcactaatgttttcaactgggttgctctccactggatgcctattaaatgctcagcacttt
ggagtataccagagaagtaaagacatggcccctgccttcaaggagcattttatccagttg
gaaatcatagaagaacacattgataagatgtcaaaaagatcaaagcagctgaaatatgga
gccaacacatggaagaaaactgtccgcagattcatccatacccatagctga

>gi568815596r:177130788_177364576|GENSCAN_predicted_peptide_8|128_aa
MAPENKKLKKAVFMAKKRNVTRKDISGLVSKITEKEESTEEPYIQNCGLSCKKYKKILKV
FMSAYHLISNTIIHMCLIEQIFNEDLYARQYHSERTMEDESERSEASIREFHLIDNLMRP
GRDDEGLS

>gi568815596r:177130788_177364576|GENSCAN_predicted_CDS_8|387_bp
atggccccggagaataagaaactgaagaaagcagtttttatggcaaaaaaaagaaatgta
acgaggaaggacatatctggcttggtttccaagattactgagaaagaagaaagtactgag
gagccttatattcaaaactgtggactatcttgcaaaaaatacaagaagatattgaaagtt
ttcatgagtgcctaccacctaatctcaaacactatcattcatatgtgcctcattgagcaa
atctttaatgaggatctatatgccaggcagtatcactctgagaggactatggaggatgaa
tcggagagaagtgaggctagtatcagggagttccatttaatagacaatttaatgaggcca
ggcagagatgatgaaggcctgagttaa