GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:57:41

Sequence gi568815597f:50870369_51074267 : 203899 bp : 39.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    926    921    6                               1.05
 1.01 Sngl -  18754  17966  789  1  0   64   38   286 0.401  16.87
 1.00 Prom -  20232  20193   40                              -8.25

 2.02 PlyA -  20432  20427    6                              -0.45
 2.01 Sngl -  20842  20492  351  1  0   72   36   236 0.618  12.60
 2.00 Prom -  22908  22869   40                              -6.05

 3.02 PlyA -  27196  27191    6                               1.05
 3.01 Sngl -  36445  35339 1107  1  0   58   49   488 0.930  38.52
 3.00 Prom -  36931  36892   40                             -11.44

 4.02 PlyA -  37378  37373    6                               1.05
 4.01 Sngl -  38119  37463  657  1  0   49   41   256 0.454  12.92
 4.00 Prom -  38212  38173   40                             -10.15

 5.03 PlyA -  38383  38378    6                               1.05
 5.02 Term -  39572  39334  239  0  2   80   54   232 0.964  14.35
 5.01 Init -  48185  48053  133  2  1   78   47    25 0.048  -2.25
 5.00 Prom -  48309  48270   40                              -3.65

 6.06 PlyA -  48994  48989    6                               1.05
 6.05 Term -  62330  62055  276  2  0  -19   42   247 0.076   3.88
 6.04 Intr -  74868  74725  144  0  0   54   84    59 0.016   1.66
 6.03 Intr -  89485  89399   87  1  0   83   72   124 0.238   9.55
 6.02 Intr -  90024  89842  183  0  0   27  -52   225 0.334   1.46
 6.01 Init -  93194  93192    3  2  0   93  115     0 0.748   3.25
 6.00 Prom -  96512  96473   40                              -9.95

 7.00 Prom +  97288  97327   40                              -4.35
 7.01 Init +  98420  98958  539  1  2   27   15   509 0.055  31.88
 7.02 Intr + 101836 101899   64  1  1   99   53    32 0.015  -1.40
 7.03 Term + 103525 103902  378  0  0   81   41   309 0.960  19.30
 7.04 PlyA + 103941 103946    6                              -1.75

 8.00 Prom + 104857 104896   40                              -5.85
 8.01 Init + 106624 106694   71  0  2   29   27   122 0.544   0.77
 8.02 Intr + 107508 107631  124  0  1   58   64   155 0.869   9.77
 8.03 Term + 107813 108034  222  1  0   69   55   230 0.538  13.73
 8.04 PlyA + 108831 108836    6                               1.05

 9.00 Prom + 109181 109220   40                              -4.95
 9.01 Init + 118828 118884   57  0  0  114  100   -25 0.524   2.67
 9.02 Term + 135959 136381  423  1  0   57   38   254 0.890  11.61
 9.03 PlyA + 136778 136783    6                               1.05

10.02 PlyA - 137763 137758    6                               1.05
10.01 Sngl - 154305 153583  723  0  0   86   41   249 0.975  15.98
10.00 Prom - 159839 159800   40                              -5.15

11.00 Prom + 174125 174164   40                              -4.95
11.01 Init + 188566 188710  145  0  1   71   75   149 0.048  12.23
11.02 Term + 190152 190225   74  1  2   65   47    78 0.037  -1.51
11.03 PlyA + 191410 191415    6                               1.05

12.03 PlyA - 192454 192449    6                               1.05
12.02 Term - 197445 197300  146  1  2  -22   42   184 0.380  -0.11
12.01 Init - 197642 197531  112  2  1   52   93    64 0.445   3.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  82845  82725  121  0  1   68   74    83 0.825   5.30
S.002 Sngl +  98420  98962  543  1  0   27   48   520 0.936  37.74
S.003 Init + 100001 100129  129  1  0   57   77   109 0.907   6.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_1|262_aa
MVKFLDTYTLPRLNQEEAESLNRPITGSEIEAIINSLPTKKSPGPDGFRAKFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNINAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGSFDIRKSVNVIQHINRTKDKNLIDAEKAFDKILQPF
MLKSLNKLGINGMYLNIIRAVYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVL
EVLARAIRQEKERKGIQLRKEE

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_1|789_bp
atggttaaattcctcgatacatacaccctcccaagactaaaccaggaagaagctgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccgggaccagatggattcagagctaaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaagccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagag
aattttagaccaatatccctgatgaacatcaatgcaaaaatcctcaataaaatactggca
aaccaaatccagcagcatatcaaaaagcttatccaccatgatcaggtgggcttcatccct
gggatgcaaggctcgttcgacatacgcaaatcagtaaacgtaatccagcatataaacaga
accaaagacaaaaacctaatcgatgcagaaaaggcctttgacaaaattctacagcccttc
atgctaaaaagtctcaataaattaggtattaatgggatgtatctcaatataataagagct
gtttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccct
ttgaaaactggcactagacagggatgccctctctcaccacttcttttcaacatagtgttg
gaagttctggccagggcaatcaggcaggagaaagaaagaaaggggattcaattaagaaaa
gaggaataa

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_2|116_aa
MELKTVAQELHDTCTSFNSRFHQLQERISVIEDQMNEIKQEGKFREKRIKINEQSLQEIW
DYVKRPNLRLIGVPESDGENGTKLENTLQDIIQENFPNLARRANIQIQEIQRTSQR

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_2|351_bp
atggaactgaaaaccgtggcacaagaactacatgacacatgtacaagcttcaatagccga
tttcatcaactgcaagaaagaatatcagtgattgaagaccaaatgaatgaaattaagcaa
gaagggaagtttagagaaaaaagaataaaaataaatgaacaaagtctccaagaaatatgg
gactatgtgaaaagaccaaatctacgtttgattggtgtacctgaaagtgacggggagaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagca
aggcgggccaacattcaaattcaggaaatacagagaacgtcacaaagataa

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_3|368_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESRIMSELPFTIAS
KRTKYLGIQLTRDVKDLFKENYKPLLNELKEDTNKWKNIPCLWIGRINIVKMAILPKIIY
RFNAIPIKPPMTFFTELEKRTLKFIWNQKRACIAKTIVSQKNKAGGITLPDFKLYYKATI
TKTAWYWYQNRDVDQWNTTEPSEIIPHIYNHLIFDKPDKNKKWGKDSLFNKWCWENWLAI
CRKLKLDPFLTPYTKINSRWIKDSNVRRKTIKTLEENVGNTIQDLGMGKDFMTKTPKAMA
TKAKIDKRDLIKLKSFCTAKETAIRVNRQPTEWEKNFAIYPSDKGLISRIYKELKHIYKK
KSTPSKSG

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_3|1107_bp
atgattgtgtatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaggcattcctatac
accaataacagacaaacagagagccgaatcatgagtgaactcccattcacaattgcttca
aagagaacaaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggag
aactacaaaccactgctcaatgaactaaaagaggatacaaacaaatggaagaacattcca
tgcttatggataggaagaatcaacattgtgaaaatggccatactgcccaagataatttat
agattcaatgccatccccatcaagccaccaatgactttcttcacagaattggaaaaaaga
actttaaagttcatatggaaccaaaaaagagcctgcattgccaagacaatagtaagccaa
aagaacaaagctggaggcatcacgttacctgacttcaaactatactacaaagctacaata
accaaaacagcatggtactggtaccaaaacagagatgtagaccaatggaatacaacagag
ccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgataaaaac
aagaaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaaggtgg
attaaagactcaaatgttagacgtaaaaccataaaaaccctagaagaaaacgtaggcaat
accattcaggacttaggcatgggcaaggacttcatgactaaaacaccaaaagcaatggca
accaaagccaaaattgacaaacgggatctaattaaactaaagagcttctgcacagcaaaa
gaaactgccatcagagtgaacaggcaacctacagaatgggagaaaaattttgcaatctac
ccatctgacaaagggctaatatccagaatctacaaagaacttaaacatatttacaagaaa
aaatcaaccccatcaaaaagtgggtga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_4|218_aa
MGDFNTPLSTLDRSMRQKVNKNIQELNSALHQADLIDIYRTLHPRSAEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTRNHSTTWKLNNLLLNDYWV
YNEMKAEIKMFFETNENEDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELDKQEQTHSKASRRQEITKIRAELKEIETQKNLQKNQ

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_4|657_bp
atgggagactttaacaccccactatcaacattagacagatcaatgagacagaaagttaac
aagaatatccaggaattgaactcagctctgcaccaagcagatctaatagacatctacaga
accctccaccccaggtcagcagaatatacattcttctcagcaccacatcacacttattcc
aaaattgaccacatagttggaagtaaagcgctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaagctc
actcgaaaccactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
tataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacgaagacaca
acataccagaacctctgggacacttttaaagctgtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagataagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggagatagagacacaaaaaaaccttcaaaaaaatcaatga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_5|123_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLSQEQKTKHRIFSLIEECSSSPATEQSWMEN
DFDELRQEGFRQSVITNFSELKGDLQTHRKEAKNLEKRLDEWLTRINSVEKTLNDLMKLK
TMA

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_5|372_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaattggaaaccatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccgcata
ttctcactcatagaggaatgcagctcctcaccagcaacggaacaaagctggatggagaat
gactttgacgagttgagacaagaaggcttcagacaatcggtaataacaaacttctccgag
ctaaagggggatcttcaaacccatcgcaaagaagctaaaaaccttgaaaaaagattagac
gaatggctaaccagaataaacagcgtagagaagaccttaaatgacctgatgaagctgaaa
accatggcatga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_6|230_aa
MRRDPGRVVARSALDRRVVTWSRKAALCDLDDRQNVRQPWRWPTRGGGGGQGGSGGGGGG
RGVRASLPEPRNSAAAMASNMDREMILADFQKPICVILLAFWTVCSLTVVHLLSYKPLSN
ELIVKVFDASMLPAVHRHLWSCEKRATILQIPEWQIHQQLHPVPGKAADTQCQPVKAPRR
EAVPCKATGAELPKTMGTHLLHPCDLNVRPGVKGDHFGALKFNCPAGFHT

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_6|693_bp
atgcgcagagatcctggccgggtagtcgcgcgctcagcgcttgacaggagggtggtcacg
tggagccgcaaagcggcgctttgcgacctcgatgacaggcaaaatgtgcgacagccgtgg
cgctggccaaccaggggcggaggcggcggccagggaggaagcggaggaggcggaggcggc
cgcggcgtgcgcgcttcgctcccggagccgcggaactcggcggccgccatggcgtccaac
atggaccgggagatgatcctggcggattttcagaaaccaatctgtgttatacttttggct
ttctggactgtttgcagtctaacagtagtgcaccttttatcgtacaagccactcagcaat
gaactgattgtcaaggtatttgatgcttccatgctccctgccgttcataggcatctgtgg
agctgtgagaagagggccaccatcctccagatcccagaatggcagatccaccaacagctt
caccctgtgcctggaaaagctgcagacactcagtgccagcctgtgaaagcacctagaagg
gaggctgtaccctgcaaagccacaggcgcggagctgcccaagaccatgggaacccacctt
ttgcatccgtgtgacctgaatgtgagacctggagtcaaaggagatcattttggcgcttta
aaatttaactgccccgctggatttcacacttga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_7|326_aa
MRSEKREKKPAPSLRGNRSSNCFSEKSSKGGSEGKKQKRGRHASACRGERSRDRRSRGGS
ATKETVTGSGAAKEEAVLPGSAPGHSWLAAALSAAKGHRPGTARGGKVAPGAEAAERSPR
RRPDWLPRNCGDSPYSELGLRFPGLSPSPEAPTKPGKEGKDSGGSSSMSAYSRKPERARS
SLNMTKSLGTVVVVSIFNNQKVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF
LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACD
LARLYGRNEVVSLMQANGAGGATNLQ

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_7|981_bp
atgaggtcggaaaaaagggagaagaaaccggcaccctctctgagaggcaacagaagcagc
aattgtttcagcgaaaaaagcagcaagggagggagtgaaggaaaaaagcaaaaaaggggg
cgacacgcaagtgcctgtaggggtgaaaggagcagggaccggcgatctagggggggatca
gctacaaaagaaactgtcactgggagcggtgcggccaaggaggaagcagtgctgccaggc
tctgctccagggcacagctggctggcggctgccctgtccgcagcaaaggggcacaggccg
gggaccgcgagaggtggcaaagtggcaccgggcgccgaggctgctgagcgctcgccgaga
cggcgaccggactggctgccccggaactgcggcgactctccctactcagaacttggccta
cgtttcccaggactctccccatctccagaggcccccacaaaaccgggaaaggaaggaaag
gacagcggcggcagcagctcaatgagtgcctacagcagaaagcctgaacgagctcggtcg
tccttaaatatgactaaatctttagggacagttgtggtcgtatcaatttttaataaccaa
aaagttatgaaacttggaaatcccgagattgccaggagactgctacttagaggtgctaat
cccgatttgaaagaccgaactggtttcgctgtcattcatgatgcggccagagcaggtttc
ctggacactttacagactttgctggagtttcaagctgatgttaacatcgaggataatgaa
gggaacctgcccttgcacttggctgccaaagaaggccacctccgggtggtggagttcctg
gtgaagcacacggccagcaatgtggggcatcggaaccataagggggacaccgcctgtgat
ttggccaggctctatgggaggaatgaggttgttagcctgatgcaggcaaacggggctggg
ggagccacaaatcttcaataa

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_8|138_aa
MESVAQDWFRNLSSQKGAFGFCRGIWIPVALERQKGRGDRKAAKEASGRSLPQPPPAGNL
GGALGAAVPEEAAAIPLDGSGDLCLRTGAGGRPGSKGQRAGECLALRGGELAAGRSGEAE
QTAPDLDASTPFPSPHDS

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_8|417_bp
atggagtccgtggcccaggactggtttcgaaatctcagttcccaaaaaggtgctttcggc
ttttgccgggggatttggatcccagtggccctggagcggcagaagggccgcggcgatagg
aaagcagcgaaggaggccagtggccggagtctgccccagcccccacccgcgggtaacctt
ggaggcgccctcggagcagcggtccccgaggaggcggcagccatcccactggacggttct
ggcgacctgtgcctgaggaccggggccggagggcggccagggagcaagggccagcgggcc
ggtgagtgcctagctcttcgcggaggtgagctggcggcgggacgcagcggggaggctgag
caaacggcgcccgacctcgatgccagcactcccttcccctccccccatgacagctga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_9|159_aa
MPSQLTSYVIEVSLSDQNKDHNSSPAREQNWTENEFDKLTEVGFRRWEITNSSELKEHVL
IQCKEAKNLEKRLEELLTRITSLEKNINDLMELKNTAQEFCEAYTSINSRINQAEERISE
IEDQLNEIKPEDKIRGKRRKRNEQTSNKYGTMWKDQTYV

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_9|480_bp
atgcccagccagctaacctcgtatgtaattgaggtttctctctcagatcagaacaaggat
cacaactcctcgccagcaagggaacaaaactggacagagaatgagtttgacaaattgaca
gaagtaggcttcagaaggtgggaaataacaaactcctccgagctaaaggagcatgttcta
atccaatgcaaggaagctaagaaccttgaaaaaaggttagaggaattgctaactagaata
accagtttagagaagaacataaatgacttgatggagctgaaaaacacagcacaagaattt
tgtgaagcatacacaagtatcaatagccgaatcaatcaagcagaagaaaggatatcagag
attgaagatcaacttaatgaaataaagcctgaggacaagattagaggaaaaagaaggaaa
aggaatgaacaaacctccaataaatatgggactatgtggaaagaccaaacctacgtttga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_10|240_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIRNQKRACIAKTILSKKNKARSITLPD
FKLYYKVTVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNHLIFDEPDKNKEWEKDSLFNK
WHWENWLAMCRKLKLDPFLTPYTKINSIWIKDLNVRLKTTKSLEENVGNTIQDIGMGKDF
MTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKNFAISQRANIQNQQIT

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_10|723_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcataaggaaccaaaaaagagcc
tgcattgccaagacaatcctaagcaaaaagaacaaagctcgaagcatcacgctacctgac
ttcaaactatactacaaggttacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaaataacaccacacatctacaaccat
ctgatctttgacgaacctgacaaaaacaaggaatgggaaaaggattccctatttaataaa
tggcactgggaaaactggctagccatgtgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaatatggattaaagacttaaatgttagacttaaaaccaca
aaatccctagaagaaaatgtaggcaataccattcaggacataggcatgggcaaggacttc
atgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaaattttgcaatctcacaaagggctaatatccagaatcaacaaataact
taa

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_11|72_aa
MEEDCHLQVGASDGSSGLSGVATVKMPASAGEAQLGLHTLLSPRVPGTGNEKERRAAALQ
GAQMHRLPQPGL

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_11|219_bp
atggaggaagactgtcacctacaggttggtgcaagtgatggcagcagtggcctgtctgga
gtagccactgtgaagatgccggcttcagcaggggaagcacaactggggctgcacactctg
ctgagcccacgggtgccgggaacaggcaatgagaaggagagaagagctgcagcccttcag
ggagctcagatgcacaggctcccccagccagggctgtga

>gi568815597f:50870369_51074267|GENSCAN_predicted_peptide_12|85_aa
MGIFLHKLSLPAAIHMRRDLPLLAFHHDCEAPPATWDLNWYRERGMAEKIPENVEATLEL
GNWQRLEQFGGLRRRQENVGKFGAF

>gi568815597f:50870369_51074267|GENSCAN_predicted_CDS_12|258_bp
atgggaattttcctgcacaagctctctttgcctgctgccatccacatgagacgggacttg
cctctccttgccttccaccatgattgtgaggctcccccagccacgtgggacttaaattgg
taccgagagaggggtatggctgaaaagatacctgaaaatgtggaagcgactttggaactg
ggtaactggcagagattggaacagtttggagggctcagaagaagacaggaaaatgtggga
aagtttggagctttttga