GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:08:43

Sequence gi568815591r:135829929_136077100 : 247172 bp : 39.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1421   1416    6                               1.05
 1.05 Term -   2766   2543  224  1  2   85   42   116 0.781   2.80
 1.04 Intr -   4569   4376  194  2  2   60   56   167 0.777   8.91
 1.03 Intr -   6708   6558  151  1  1   49   73    19 0.035  -5.20
 1.02 Intr -  16306  16178  129  2  0   47   87   106 0.821   6.15
 1.01 Init -  16942  16858   85  1  1   73   38    75 0.805   2.05
 1.00 Prom -  18589  18550   40                              -3.65

 2.02 PlyA -  18873  18868    6                              -0.45
 2.01 Sngl -  19902  19000  903  0  0   60   34   327 0.987  20.46
 2.00 Prom -  23310  23271   40                              -5.25

 3.14 PlyA -  24236  24231    6                               1.05
 3.13 Term -  27727  27562  166  0  1   62   53   130 0.829   3.31
 3.12 Intr -  28898  28616  283  0  1   64   65   269 0.005  17.75
 3.11 Intr -  34311  34222   90  1  0   80   53    66 0.031   1.35
 3.10 Intr -  44588  44375  214  2  1   18   86   134 0.056   3.57
 3.09 Intr -  48374  48304   71  0  2  109   62    57 0.133   3.18
 3.08 Intr -  48598  48469  130  1  1    5   59   158 0.162   3.95
 3.07 Intr -  65095  64993  103  0  1   33   29   134 0.003   1.26
 3.06 Intr -  72138  71841  298  1  1    4   58   220 0.205   5.61
 3.05 Intr -  79807  79694  114  2  0   69   60    57 0.246   0.50
 3.04 Intr -  83390  83247  144  0  0   12   78   118 0.006   2.53
 3.03 Intr -  89078  88971  108  0  0   41   96    64 0.028   1.84
 3.02 Intr -  89532  89282  251  2  2   42   42   160 0.009   2.96
 3.01 Init -  90705  90629   77  0  2   59   92    37 0.007   1.81
 3.00 Prom -  91113  91074   40                              -5.95

 4.10 PlyA -  92541  92536    6                               1.05
 4.09 Term - 100084  99998   87  1  0  143   45   136 0.996  11.48
 4.08 Intr - 120754 120671   84  1  0   85  100    45 0.852   4.50
 4.07 Intr - 121702 121589  114  1  0   78   63   184 0.853  14.62
 4.06 Intr - 147174 147101   74  1  2   63  121   106 0.130   9.61
 4.05 Intr - 152420 152322   99  0  0  105   91    26 0.133   3.76
 4.04 Intr - 169461 169365   97  0  1   50   70   129 0.224   5.96
 4.03 Intr - 173668 173533  136  0  1   26   89   101 0.341   3.65
 4.02 Intr - 178922 178805  118  0  1   94   98    72 0.769   7.40
 4.01 Init - 180004 179998    7  1  1   53  110     0 0.647  -0.11
 4.00 Prom - 181725 181686   40                              -6.75

 5.04 PlyA - 181953 181948    6                               1.05
 5.03 Term - 183064 182860  205  0  1   68   48   272 0.946  17.06
 5.02 Intr - 203153 203086   68  2  2   35  115    18 0.001  -4.02
 5.01 Init - 216963 216829  135  0  0   43  116   185 0.988  16.99
 5.00 Prom - 217688 217649   40                             -11.74

 6.03 PlyA - 217844 217839    6                               1.05
 6.02 Term - 219518 219277  242  0  2   48   51   231 0.512  10.60
 6.01 Init - 225198 225147   52  0  1   71   78    55 0.550   4.17
 6.00 Prom - 228532 228493   40                              -4.95

 7.03 PlyA - 231132 231127    6                               1.05
 7.02 Term - 233977 233767  211  0  1   37   43   220 0.400   8.18
 7.01 Init - 235609 235602    8  1  2  114   91     0 0.684   3.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  88357  88622  266  2  2   66   41   200 0.896   7.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_1|260_aa
MHTICPLALRPKVLDGITPLAVLGLQLAGSWRGVHYPASHDTRSHIPAQWSLKKRQKASR
LSAQTDFTDPSYPLSLPPHQHSTMLSLTSGKTKALLPLSETLLPPPLCARIQITLEASGA
GGGLWEPDASVFDNVEGNVCTAFFWVPLPLTGQLGQILPALSHSPKPQNQLPLPPPSSFS
AHENGAPSTYQTPEPGLTKAGKRLGASGHQEMEPGTDCAATDPWCLQRSLNILISTRSSP
SANTCPTAGCPPMPPLGEWS

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_1|783_bp
atgcacaccatctgccccttggctctcaggcctaaggtcttagacggcattacaccactg
gctgtcctgggtctccagcttgcaggctcttggagaggggttcactacccagccagccat
gacacaagatctcacatacctgcacagtggtctctgaagaaaagacagaaagcctctcga
ctctcagcgcagactgatttcacagatccgagctatcctctgtctctcccaccacaccaa
cactcaactatgctctccctcacttctgggaagacaaaggcccttcttcccttatctgaa
acactcttgcctccacctctctgtgccagaattcagataacattagaagcttcaggagca
ggagggggactgtgggaaccggatgcttctgtgtttgacaatgtggaaggtaacgtctgc
acggctttcttctgggtccctctgcccctcacaggccagctgggtcagatactcccggca
ttatcacactctccaaaacctcagaaccagctccctttgccacctccttcttccttctct
gctcatgaaaatggtgcaccctccacttatcaaaccccggagccagggctgaccaaggca
ggtaagagacttggagcctcgggccaccaagagatggaacctggaacagattgtgctgcc
accgatccttggtgcctgcagaggagcctgaacatcctcatatccactaggtcttcacct
tctgccaacacctgccccacagctgggtgtcccccaatgcctcctctgggagaatggagc
tga

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_2|300_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPQLNEIKEDTKKWKNIPCSWVGRINIV
KMAILPKVIYRFNAILIKLPMTFFTELEKTTLKFIRNQKRARIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPDKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIDIGKD
FMSKTPKAMAPKAMATKAKIDKWDLIKLKSFCTAKETTIRVTGNLQNGRKFSQPTHLTKG

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_2|903_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccacagctcaatgaaataaaa
gaggatacaaagaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatcctcatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatacggaaccaaaaaaga
gcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagatcaatggaacagaacagagccctcagaaataacaccacatatctacaac
tatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaac
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaacc
atcaaaaccctagaagaaaacctaggcattaccattcaggacatagacataggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaccaaaagcaatggcaacaaaagccaaaatt
gacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcaga
gtgacaggcaacctacaaaatgggagaaaattttcacaacctactcatctgacaaagggc
taa

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_3|682_aa
MQSFQSSSLEVHTSPWSPQKLTIAPRGQQRVPTLMGSTPELSNWTALMGPHRRQKPSSPR
SLQRPTNTSDPGRELHLRLAILWNRNVVPRLYHTKQLCFPISPRLPKHRARGKSIAVVFD
GAEENKEFLSEDNQTKCRMFWLYDPVAMSTPSTLILVSEHHSPVKEPRLLEGVVNSRSGQ
ENCNVILEYLAPKNHIGELPHVAMAFVNCHGAGGSVAVRTTRSHSRGHLGFGGSVDAAHP
HPPAGKGWGTLALKSRAAIMSQECAKHSGPTPSPVESGWGPGINAFMGLHSGSGGEGHCS
HFETVFGWLNPSVIMRGANHQNKGSFSELVSIQEWYDDFLAEGPGELSDILTNGNHSYSR
CLVTHSGTKTALDLREEEVDFVRNGEVRSMGYHTGQNEGKERNDTKIGVNFLRAETQSRS
QPSQMEKGLFPLRIKYLGIQLTRDVKDLFKENYKPTYKGCEGPLQGELQTTAQGNKRRYK
QMEEHSMLMCRKNQYHENGHTAQDQTPMPAAPSQICASVTLHSGDSLSAGLTNGRGSAWV
RLRLHPQDPSLIEVTAEPDAPNDRIWGPRSTPSGASLGRQGHKLGKGEPQAIPEHQGHRK
NSQQHRLWPGRWPRPREDLETPPQAARRTRTQDPSNGRAKRAVTQTELKYALCSPLCRQQ
EGEKREGEKSCSPSGIPDLGDP

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_3|2049_bp
atgcagtcatttcaaagcagctcccttgaggtccacactagcccatggtcaccccagaag
ctaacaattgcccccaggggccagcagcgggtccccaccctgatgggttctactccagag
ctctctaactggactgccctcatgggaccacataggagacagaagcccagctctcccagg
tctctgcagcgacctactaatacttcagatccaggaagagagctgcacctgcgtttggca
atcttatggaacaggaacgtggtccccaggctttatcacaccaagcagctgtgttttcca
atatctcctcgtctccctaagcacagggccaggggaaaaagtattgctgtggtttttgat
ggtgctgaggagaacaaggaattcctctctgaggataaccaaaccaaatgcagaatgttt
tggttgtatgacccagtggctatgagcacacccagcaccctgatcttggtttctgaacat
cattctccagtaaaagaaccaaggctccttgaaggagtggttaattctaggtctggacag
gaaaactgcaatgtgatcctggagtatcttgcgcccaaaaaccatataggggaacttcct
cacgttgccatggcatttgtaaactgtcatggtgctggtgggagtgtagcagtgaggacg
accagaagtcactctcgtggccaccttggttttggtggcagtgttgatgctgcccatcct
catccaccagcaggcaagggctggggcaccctagccctgaagtctagagctgccatcatg
tcccaagagtgtgccaagcactctgggccaacacccagccctgtggagtctggctgggga
ccaggaataaatgcatttatgggacttcacagtggctctggaggagaaggccactgcagt
cactttgaaacagtgtttggttggctaaacccaagtgtcatcatgaggggtgccaatcat
caaaacaaaggcagcttttcagagctagtgagcatacaggaatggtatgatgacttcctg
gcagaaggccccggagagttgtcagacatcctgacaaatgggaatcactcctattctcgg
tgtttggtcacacattcaggtaccaagacagcacttgatctgcgggaagaagaggtagat
tttgtgagaaatggggaagtcaggtctatgggataccacacaggacagaatgaagggaag
gaaagaaacgacacaaaaataggagtgaattttctaagagcagaaacgcagtcacgcagt
cagccttctcagatggaaaagggattgttcccattgagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccaacttacaagggatgt
gaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaagatacaaa
caaatggaagaacattccatgctcatgtgtagaaagaatcaatatcatgaaaatggccat
actgcccaagatcaaacgccaatgccagcagctccttcacagatctgtgccagtgtcaca
ctgcactcaggggactctttgtcagctggtctaacaaatggaagaggctctgcatgggtc
cgcctgaggctacatccccaggatccgtccctcattgaggtgaccgctgagcctgatgct
cccaatgaccggatctggggcccaagatccactcccagtggtgcctccctgggcaggcag
ggccacaagctgggcaaaggggagccccaggccatccctgagcaccagggccacaggaaa
aactcacagcagcatcgcctctggcctggacgctggcccaggcccagagaggacctggaa
accccaccccaggctgcaaggaggacaagaactcaggatccatctaatggcagagctaaa
agagctgtaacacagacagagctgaaatatgccctttgctcaccactttgtaggcaacaa
gaaggagagaagagagaaggagagaagagctgcagcccttcagggatcccagacctagga
gatccctga

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_4|271_aa
MQGSMQLKGQRMYVIDLVPSHSILQIGHLEPRGDAGLVHVTHESSRMAYYSICISELALI
FPFPSSIRTLEYLALASNAASAISTYQSQMLHMASYPKELSPPPAAAPTECDSSSAHITA
HFSPLNTETLKIIFEERHRSQTVSAIPCSFVPVMCDKEFMWALKNGDLDEVKDYVAKGED
VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLL
LSKGADKTVKGPDGLTAFEATDNQAIKALLQ

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_4|816_bp
atgcagggttcgatgcaactcaaaggccagaggatgtatgttattgatctagtgcccagc
cattccattttgcagattggacatctagagcccagaggggatgcaggacttgtccatgtc
acacatgagtcttctcgtatggcctattattccatttgcatctccgagcttgccctcata
ttcccgttcccttctagtatacgtactttagaatacctggctctggcttcaaatgctgct
tctgctattagtacttaccagtcccagatgctgcacatggccagctaccctaaggaactc
agtcctcctccagctgctgctcctacagaatgtgattcttccagcgcgcacatcactgcc
cacttctcccctttaaatactgaaactctcaaaatcatctttgaagaaaggcacagatca
cagactgtttctgcgattccatgttcatttgttccagtgatgtgcgacaaggagttcatg
tgggccctgaaaaacggagacttggatgaggtgaaagactatgtggccaagggagaagat
gtcaaccggacactagaaggtggaaggaaacctcttcattatgcagcagattgtgggcag
cttgaaatcctggaatttctgctgctgaaaggagcagatattaatgctccagataaacat
catattactcctcttctgtctgctgtctatgagggtcatgtttcctgtgtgaaattgctt
ctgtcaaagggtgctgataagactgtgaaaggcccagatggactgaccgcctttgaagcc
actgacaaccaggcaatcaaagctcttctccagtga

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_5|135_aa
MEEAGRTVKGDITIRNRFRSEVTAGSEDERGNKPKNAGGLQQLEKFPWDIINITHMTSPH
ALTYFIPCFTPEASETTNPPGGTNNSRRATLRAVTLTAKVCSFTPEASKTTNPQEGRNSE
HIRTSEGTNSGHQRL

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_5|408_bp
atggaagaggcaggtagaacagtcaaaggagatataacaatcagaaacagatttcgaagt
gaagtgactgctggctctgaagatgaacggggcaacaagccaaagaatgcaggtggcctc
cagcagctggagaagtttccatgggacatcatcaatataacacacatgacctctccccac
gcactcacttattttattccatgcttcactcctgaagccagcgagaccacgaacccacca
ggaggaacgaacaactccagacgcgccaccttaagagctgtaacactcactgcgaaggtc
tgcagcttcactcctgaagccagcaagaccacgaacccacaagaaggaagaaactccgaa
catatccgaacatcagaaggaacaaactccggacaccaacgcctttaa

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_6|97_aa
MEQKEEHSIQIQRFYHLNHGDAYTHTVGSASFPPGTLPNFPNAPPIVSVRGRSDAIAVSE
DKGATSQGMQVASRYWKGQGTRISPRASQRNLTLLTF

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_6|294_bp
atggaacaaaaagaagaacacagtattcagatccagaggttctatcacctaaaccatgga
gatgcctacactcacactgtgggttcagccagcttcccaccaggaacgctccccaacttc
cccaacgctcctcctattgtctcggtcagaggtcgaagtgatgcaattgctgtatctgaa
gataagggggcaacaagccaaggaatgcaggtggcctctagatactggaaagggcaagga
accagaatctccccgagagcctcccagaggaacttaaccctgctgacattctga

>gi568815591r:135829929_136077100|GENSCAN_predicted_peptide_7|72_aa
MPRLVFCKAPFKVLEVLDQFTDGKEEGREEEKRKESVRAGTEVKECEVHSKKSGLVWTSI
GYLEEKEIRIEG

>gi568815591r:135829929_136077100|GENSCAN_predicted_CDS_7|219_bp
atgcccagattggttttttgcaaggcaccgttcaaggtgctggaagtgctggaccagttt
actgatggaaaagaagaaggaagagaggaagaaaaaagaaaggaatctgtacgagcaggg
acagaagtcaaggagtgcgaggtacactccaaaaagagtggcctggtttggacaagtatc
ggttacctagaggagaaagagatcaggatagaagggtag