GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:51:16

Sequence gi568815583r:50178635_50409798 : 231164 bp : 41.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3794   4271  478  1  1   83   99   705 0.842  64.72
 1.02 Intr +  18866  19075  210  0  0   13   98   149 0.895   6.36
 1.03 Intr +  23853  24011  159  1  0   67  107   129 0.746  11.74
 1.04 Intr +  26605  26729  125  2  2  113   92   109 0.996  13.18
 1.05 Intr +  29404  29573  170  0  2   74   60   152 0.991   8.82
 1.06 Intr +  30608  30773  166  2  1   72   86    17 0.641  -1.06
 1.07 Intr +  31699  31824  126  0  0   51   75   117 0.935   6.66
 1.08 Intr +  44331  44525  195  2  0   96  106   177 0.999  18.99
 1.09 Intr +  47354  47444   91  1  1   39   87   144 0.999   8.05
 1.10 Intr +  48346  48544  199  2  1   95   28   187 0.753  10.89
 1.11 Intr +  50311  50408   98  1  2  130   76   105 0.750  12.23
 1.12 Intr +  55234  55364  131  2  2   99   94    95 0.975  10.69
 1.13 Term +  57286  57462  177  0  0   60   42   194 0.939   8.70
 1.14 PlyA +  59485  59490    6                               1.05

 2.14 PlyA -  62965  62960    6                               1.05
 2.13 Term -  64372  63626  747  1  0   93   42   622 0.995  50.56
 2.12 Intr -  64610  64509  102  2  0   79   85   116 0.948   9.85
 2.11 Intr -  69709  69611   99  1  0  101   50    74 0.837   4.29
 2.10 Intr -  73886  73796   91  1  1   65  101    96 0.632   7.68
 2.09 Intr -  74140  73978  163  2  1   99  105   209 0.981  21.81
 2.08 Intr -  75032  74966   67  2  1  127   84    42 0.974   5.26
 2.07 Intr -  75639  75496  144  0  0   98   78   145 0.998  14.06
 2.06 Intr -  76030  75896  135  1  0  104  109   193 0.988  22.84
 2.05 Intr -  76994  76915   80  0  2   95   80   -47 0.876  -6.45
 2.04 Intr -  79067  78791  277  2  1   72   82   258 0.947  19.77
 2.03 Intr -  79883  79770  114  2  0  104   92     6 0.512   2.32
 2.02 Intr -  84773  84601  173  0  2  105   64   230 0.716  21.04
 2.01 Init -  86986  86899   88  1  1   78   68   107 0.543   8.55
 2.00 Prom -  92812  92773   40                              -4.05

 3.11 PlyA -  96352  96347    6                               1.05
 3.10 Term - 100150  99998  153  1  0   54   32   253 0.998  13.24
 3.09 Intr - 107549 107434  116  0  2   64   72   176 0.973  12.85
 3.08 Intr - 111034 110849  186  2  0  100   96   243 0.965  25.04
 3.07 Intr - 122268 122155  114  1  0  102   66   106 0.958   9.30
 3.06 Intr - 122734 122587  148  1  1   87   72   103 0.963   7.49
 3.05 Intr - 124489 124295  195  1  0   34   93   185 0.999  12.29
 3.04 Intr - 125499 125332  168  0  0   65   95   165 0.998  14.12
 3.03 Intr - 131164 131057  108  1  0   55   38   155 0.237   6.76
 3.02 Intr - 167761 167738   24  1  0  123  113    -9 0.120   2.40
 3.01 Init - 176097 175957  141  0  0  102   36   187 0.165  13.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:50178635_50409798|GENSCAN_predicted_peptide_1|774_aa
MLSAIYTVLAGLLFLPLLVNLCCPYFFQDIGYFLKVAAVGRRVRSYGKRRPARTILRAFL
EKARQTPHKPFLLFRDETLTYAQVDRRSNQVARALHDHLGLRQGDCVALLMGNEPAYVWL
WLGLVKLGCAMACLNYNIRAKSLLHCFQCCGAKVLLVSPELQAAVEEILPSLKKDDVSIY
YVSRTSNTDGIDSFLDKVDEVSTEPIPESWRSEVTFSTPALYIYTSGTTGLPKAAMITHQ
RIWYGTGLTFVSGLKADDVIYITLPFYHSAALLIGIHGCIVAGATLALRTKFSASQFWDD
CRKYNVTVIQYIGELLRYLCNSPQSCLEYAVAGGTNPTSDPQALDAREATSALAEQLNQV
TPIHRHIWPSSSGESGASVGSLKFLSLHQLHSVQKREWMDLLQHRVESGQYDWGPRQREA
KRKREGEQNQEGSPGKKWERETLISRTHTGEAEGLFVELPDFTWSLVKLESQTEQNTKKP
NDRDHKVRLALGNGLRGDVWRQFVKRFGDICIYEFYAATEGNIGFMNYARKVGAVGRVNY
LQKKIITYDLIKYDVEKDEPVRDENGYCVRVPKGEVGLLVCKITQLTPFNGYAGAKAQTE
KKKLRDVFKKGDLYFNSGDLLMVDHENFIYFHDRVGDTFRWKGENVATTEVADTVGLVDF
VQEVNVYGVHVPDHEGRIGMASIKMKENHEFDGKKLFQHIADYLPSYARPRFLRIQDTIE
ITGTFKHRKMTLVEEGFNPAVIKDALYFLDDTAKMYVPMTEDIYNAISAKTLKL

>gi568815583r:50178635_50409798|GENSCAN_predicted_CDS_1|2325_bp
atgctttccgccatctacacagtcctggcgggactgctgttcctgccgctcctggtgaac
ctctgctgcccatacttcttccaggacataggctacttcttgaaggtggccgccgtgggc
cggagggtgcgcagctacgggaagcggcggccggcgcgcaccatcctgcgggcgttcctg
gagaaagcgcgccagacgccacacaagccttttctgctcttccgcgacgagactctcacc
tacgcgcaggtggaccggcgcagcaatcaagtggcccgggcgctgcacgaccacctcggc
ctgcgccagggagactgcgtggcgctccttatgggtaacgagccggcctacgtgtggctg
tggctggggctggtgaagctgggctgtgccatggcgtgcctcaattacaacatccgcgcg
aagtccctgctgcactgcttccagtgctgcggggcgaaggtgctgctggtgtcgccagaa
ctacaagcagctgtcgaagagatactgccaagccttaaaaaagatgatgtgtccatctat
tatgtgagcagaacttctaacacagatgggattgactctttcctggacaaagtggatgaa
gtatcaactgaacctatcccagagtcatggaggtctgaagtcactttttccactcctgcc
ttatacatttatacttctggaaccacaggtcttccaaaagcagccatgatcactcatcag
cgcatatggtatggaactggcctcacttttgtaagcggattgaaggcagatgatgtcatc
tatatcactctgcccttttaccacagtgctgcactactgattggcattcacggatgtatt
gtggctggtgctactcttgccttgcggactaaattttcagccagccagttttgggatgac
tgcagaaaatacaacgtcactgtcattcagtatatcggtgaactgcttcggtatttatgc
aactcaccacagagctgcctagaatacgctgttgctggagggactaaccccaccagcgac
ccccaagcactggatgccagggaggcaacctctgccttagcagaacagctaaaccaagtg
acacccatccacagacatatatggcccagctcatcaggagaatctggggccagtgttggg
agcctaaaatttctgtctctgcatcagcttcattctgttcaaaaaagagaatggatggat
ctgttgcagcacagagtggagagtggccaatatgactggggcccaagacagagggaggcc
aaaagaaagagggaaggggagcagaatcaggaaggttcgccagggaagaagtgggaaagg
gagaccctcatctcccgaacacatactggagaagctgaaggtctgtttgtagaacttccc
gactttacctggagcctcgtcaagttagagagccaaaccgagcaaaatacaaagaaacca
aatgaccgtgatcataaagtgagactggcactgggaaatggcttacgaggagatgtgtgg
agacaatttgtcaagagatttggggacatatgcatctatgagttctatgctgccactgaa
ggcaatattggatttatgaattatgcgagaaaagttggtgctgttggaagagtaaactac
ctacagaaaaaaatcataacttatgacctgattaaatatgatgtggagaaagatgaacct
gtccgtgatgaaaatggatattgcgtcagagttcccaaaggtgaagttggacttctggtt
tgcaaaatcacacaacttacaccatttaatggctatgctggagcaaaggctcagacagag
aagaaaaaactgagagatgtctttaagaaaggagacctctatttcaacagtggagatctc
ttaatggttgaccatgaaaatttcatctatttccacgacagagttggagatacattccgg
tggaaaggggaaaatgtggccaccactgaagttgctgatacagttggactggttgatttt
gtccaagaagtaaatgtttatggagtgcatgtgccagatcatgagggtcgcattggcatg
gcctccatcaaaatgaaagaaaaccatgaatttgatggaaagaaactctttcagcacatt
gctgattacctacctagttatgcaaggccccggtttctaagaatacaggacaccattgag
atcactggaacttttaaacaccgcaaaatgaccctggtggaggagggctttaaccctgct
gtcatcaaagatgccttgtatttcttggatgacacagcaaaaatgtatgtgcctatgact
gaggacatctataatgccataagtgctaaaaccctgaaactctga

>gi568815583r:50178635_50409798|GENSCAN_predicted_peptide_2|759_aa
MEPEEYRERGEQRASLALFPAATPAGTAAGREMVDYICQYLSTVRERRVTPDVQPGYLRA
QLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINC
LGFTWRVDQERGTWPNMTPSPEMFPLTPSGADMFLELVGAPQCPGAVQFEVPFPFSGIQP
CVYRAGDERHGLVGKNAGTSRALLAPPPQQPGRRRPAETGSHYVVQAGLKLLDSRDPPKV
LGLQSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGLI
SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC
AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYK
LQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTE
MAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLTENVLKEIAKAGRLFLIPATIQDK
LIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQHCTSQPSPRVGNLISQIRGARAWACG
TSLQSVSGAGDDPVQARKIIKQPQRVGAGPMKRENGLHLETLLDPVDDCFSEEAPDATKH
KLSSFLFSYLSVQTKKKTVRSLSCNSVPVSAQKPLPTEASVKNGGSSRVRIFSRFPEDMM
MLKKSAFKKLIKFYSVPSFPECSSQCGLQLPCCPLQAMV

>gi568815583r:50178635_50409798|GENSCAN_predicted_CDS_2|2280_bp
atggagcctgaggagtacagagagagaggtgagcaacgggcatccctggccctcttccct
gctgctactcctgcaggaacggctgctgggagagagatggtggattacatctgccagtac
ctgagcactgtgcgggagagacgtgtgacgccagacgtgcagcctggctacctgcgagcc
cagctgcctgagagtgctcctgaggaccccgacagctgggacagcatctttggggacatt
gaacgaatcatcatgcctggggtggtacattggcagagcccccatatgcacgcctactac
ccagccctcacctcttggccctccctgctaggagacatgctggctgatgccatcaactgc
ttgggattcacctggagagtggaccaggagagaggcacgtggcctaacatgaccccttct
ccagaaatgttcccattgacaccatcaggggcagacatgtttctggagctcgtgggggca
cctcagtgccctggggctgtgcagtttgaagttccttttcctttctcaggcatccagccc
tgcgtgtacagagctggagatgaacgtcatggactggttggcaaaaatgctgggacttcc
agagcacttcttgcaccaccaccccagcagccagggcggaggcgtcctgcagagacaggg
tctcactatgttgtccaggctggtctcaaactcctggactcaagggatcctcccaaagtg
ctgggattacagagcacggtcagtgaatccactttgattgccctgctggcagcaaggaag
aacaaaatcctggaaatgaaaacgtctgagcccgatgctgatgagtcctgcctaaatgcc
cgactcgtggcctatgcctctgaccaggctcactcctctgtggaaaaggctggtttgatt
tcccttgtgaagatgaaatttctgcctgtggatgacaacttctcactccgaggggaagct
cttcagaaggccatcgaggaagacaagcagcggggcttggtgcccgtctttgtctgtgca
acactagggaccactggggtctgtgcatttgactgcctgtcagagctgggccccatctgt
gcccgtgaggggctgtggctccacatcgatgctgcttatgcaggcactgccttcctgtgc
cccgagttccgggggtttctgaaggggattgagtatgccgactccttcacctttaatcct
tccaagtggatgatggtgcattttgactgtactgggttctgggtcaaggacaagtacaag
ctgcagcagaccttcagtgtgaatcccatctacctcaggcatgccaactcaggcgtggcc
accgacttcatgcactggcagatccccctgagccgacggtttcgctctgttaaactctgg
ttcgtgattcggtccttcggggtgaagaatcttcaagcacatgtcagacatggtactgaa
atggctaaatattttgaatctctggtcagaaacgacccttcctttgaaattcctgccaag
aggcaccttggcctggtggtttttcgtctaaagggtcctaattgtctcacagaaaatgtg
ttaaaggaaatagctaaagctggccgtctcttcctcatcccggccactatccaggacaag
ttaatcatccgtttcactgtgacatcccagtttaccactagggatgacatcctgagagac
tggaatctcattcgagatgctgccactctcatcctgagtcagcactgtacttcccaaccc
agccctcgggttgggaacctcatctcccaaatcaggggtgccagagcctgggcctgtgga
acgtcccttcagtctgtcagtggggcaggagatgatccagtccaggccaggaagatcatc
aagcagcctcagcgtgtgggagccggtcccatgaaaagggaaaatggcctccatcttgaa
accctgctggacccagttgatgactgcttttcagaagaggccccagatgccaccaagcac
aagctgtcctccttcctgttcagttacttgtctgtgcagactaagaagaagacggtgcgc
tccctcagttgcaacagtgtgccagtgagtgctcagaagccactgcccacagaggcctct
gtgaagaatgggggctcctccagggtcagaatcttttccaggtttccagaagacatgatg
atgctgaagaaaagtgccttcaaaaaactcatcaaattctacagcgtccccagctttcct
gaatgcagctctcaatgtggactccagctgccctgttgccctctgcaggccatggtttag

>gi568815583r:50178635_50409798|GENSCAN_predicted_peptide_3|450_aa
MVAAAAPSSALACRGRLAATRLAGPERQPRGGDGVAPRQRRFCGRLEVTAYLWRKMSLVD
LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSRD
ARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK
YGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFII
GPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPV
VATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVTMPDGQ
QVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANREAQKYR
QQLLKKEQEAEAYRQKLEAMTRLQTNKEAV

>gi568815583r:50178635_50409798|GENSCAN_predicted_CDS_3|1353_bp
atggtggcggccgccgccccctcctcggccctagcatgccgcggccgcctcgcggctacc
cggcttgccggtcccgagcggcagccccggggtggcgatggggtcgcgccgaggcagcgg
aggttctgcgggcgactggaggtcacagcatatttgtggaggaagatgtccctggtagat
ttgggaaagaagcttttagaagcggcacgagcaggtcaagatgatgaagttcgtattttg
atggcaaatggagctccctttactacagactggctgggaacttctccacttcatctagca
gcacagtatggtcattattccaccacagaggtactgctgcgagctggtgtgagcagagat
gccagaaccaaagtggaccgaacaccattacatatggcagcttctgagggccatgccagc
atagtagaggttttacttaagcatggtgctgatgtcaatgcaaaggacatgttaaagatg
acagctctccattgggccacagaacacaatcatcaagaggtggtggaacttttaatcaaa
tatggtgctgatgtacacacgcaaagtaaattttgtaaaactgcatttgatatttcaata
gacaatggaaatgaagatttagcagagatattacagattgctatgcagaaccaaatcaac
acaaacccagagagtcctgacactgtgacaatacatgctgcaacaccacagtttatcatt
ggacctggaggggtggtgaacctaacaggtctggtatcttcagaaaattcatccaaggca
acagatgaaacgggtgtatctgctgttcagtttggaaactcttctacatcagtattagct
acattagctgccttagctgaagcatctgctccattgtccaattcttcagaaactccagta
gtggccacagaagaagtagttactgcagaatctgtggatggtgccattcagcaagtagtt
agttcagggggtcagcaagtcatcacaatagttacagatggaattcagcttggaaatttg
cactctattccaaccagtggaattggtcagcccatcattgtgaccatgccagatggacaa
caagtattaacagtaccagcaacagacattgctgaagaaactgttataagtgaagaacca
ccagctaagagacaatgtatcgaaataattgaaaaccgggtggaatctgcagaaatagaa
gagagagaagctcttcagaaacagctggatgaagcaaatcgagaagcacaaaaatatcga
cagcagctcctaaagaaagaacaggaagcagaggcctacagacagaagttggaagctatg
actcgtcttcagactaataaagaagctgtttaa