FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0146, 296 aa 1>>>pF1KE0146 296 - 296 aa - 296 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4001+/-0.000781; mu= 16.9397+/- 0.047 mean_var=93.8323+/-18.381, 0's: 0 Z-trim(110.9): 10 B-trim: 0 in 0/52 Lambda= 0.132403 statistics sampled from 11946 (11948) to 11946 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.367), width: 16 Scan time: 2.270 The best scores are: opt bits E(32554) CCDS6158.1 MRPL15 gene_id:29088|Hs108|chr8 ( 296) 2004 392.4 2.2e-109 >>CCDS6158.1 MRPL15 gene_id:29088|Hs108|chr8 (296 aa) initn: 2004 init1: 2004 opt: 2004 Z-score: 2077.4 bits: 392.4 E(32554): 2.2e-109 Smith-Waterman score: 2004; 99.3% identity (99.7% similar) in 296 aa overlap (1-296:1-296) 10 20 30 40 50 60 pF1KE0 MAGPLQGGGARALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MAGPLQGGGARALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TRPRLGFEGGQTPFYIRIPKYGFNEGHSFRRQYKPMSLNRLQYLIDLGRVDPSQPIDLTQ :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: CCDS61 TRPRLGFEGGQTPFYIRIPKYGFNEGHSFRRQYKPLSLNRLQYLIDLGRVDPSQPIDLTQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LVNGRGVTIQPLKRDYDVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYD :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: CCDS61 LVNGRGVTIQPLKRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 PRSLDIVCKPVPFFLRGQPIPKRMLPPEELVPYYTDAKNRGYLADPAKFPEARLELARKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 PRSLDIVCKPVPFFLRGQPIPKRMLPPEELVPYYTDAKNRGYLADPAKFPEARLELARKY 190 200 210 220 230 240 250 260 270 280 290 pF1KE0 GYILPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GYILPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYTS 250 260 270 280 290 296 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 00:24:46 2016 done: Fri Nov 4 00:24:46 2016 Total Scan time: 2.270 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]