GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:58:12

Sequence gi568815584r:36199086_36420588 : 221503 bp : 38.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15875  15973   99  1  0   86   89   123 0.945  12.51
 1.02 Term +  16659  16856  198  2  0   64   48    99 0.809  -0.08
 1.03 PlyA +  16982  16987    6                               1.05

 2.00 Prom +  24600  24639   40                              -5.35
 2.01 Init +  45462  45597  136  2  1   46   91   125 0.806   8.95
 2.02 Intr +  63111  63302  192  1  0   79   99    45 0.262   3.24
 2.03 Intr +  63457  63562  106  2  1   83  107    17 0.110   1.45
 2.04 Intr +  73234  73414  181  1  1   81   13   204 0.718  11.15
 2.05 Intr +  78917  78985   69  1  0   81   99    57 0.861   4.56
 2.06 Term +  80894  81067  174  1  0   50   45   142 0.841   2.88
 2.07 PlyA +  81465  81470    6                               1.05

 3.10 PlyA -  82151  82146    6                               1.05
 3.09 Term -  83876  83829   48  2  0   98   41    46 0.168  -2.77
 3.08 Intr -  87856  87635  222  1  0   50   55   148 0.053   5.10
 3.07 Intr - 101738 101700   39  2  0   85  108    30 0.212   2.20
 3.06 Intr - 109104 109007   98  1  2   50   67    44 0.158  -2.69
 3.05 Intr - 112640 112488  153  0  0  -13  115   175 0.298   9.22
 3.04 Intr - 115523 115427   97  2  1   57   88    52 0.750   0.76
 3.03 Intr - 115820 115606  215  0  2   28   63   258 0.611  14.81
 3.02 Intr - 121301 121004  298  2  1   75   57   130 0.291   4.12
 3.01 Init - 121503 121375  129  0  0   74   94    92 0.930   8.60
 3.00 Prom - 128999 128960   40                              -0.75

 4.03 PlyA - 129253 129248    6                               1.05
 4.02 Term - 130372 130090  283  0  1   52   48   196 0.929   5.91
 4.01 Init - 134808 134780   29  0  2   61   65    48 0.590  -1.08
 4.00 Prom - 136039 136000   40                              -3.85

 5.00 Prom + 136256 136295   40                              -5.25
 5.01 Init + 145937 145984   48  1  0   88  111    52 0.578   8.50
 5.02 Intr + 153785 153887  103  1  1   17   53    75 0.028  -4.27
 5.03 Term + 155265 155881  617  1  2   36   28   231 0.384   5.54
 5.04 PlyA + 156009 156014    6                               1.05

 6.00 Prom + 158491 158530   40                              -3.65
 6.01 Init + 159944 160091  148  1  1   72   85   141 0.862  12.50
 6.02 Term + 172366 172808  443  2  2   17   35   270 0.004   9.03
 6.03 PlyA + 173259 173264    6                               1.05

 7.00 Prom + 177628 177667   40                              -7.15
 7.01 Init + 180067 180123   57  0  0   85   73    50 0.161   4.56
 7.02 Intr + 188363 188505  143  1  2   55    2   149 0.007   1.23
 7.03 Term + 202934 202997   64  2  1  106   48   112 0.025   5.38
 7.04 PlyA + 203818 203823    6                               1.05

 8.00 Prom + 208120 208159   40                              -7.75
 8.01 Init + 211334 212059  726  1  0   88   -3   429 0.080  28.65
 8.02 Term + 213721 213984  264  0  0   62   37   333 0.100  20.12
 8.03 PlyA + 214068 214073    6                               1.05

 9.00 Prom + 215067 215106   40                              -5.35
 9.01 Init + 215544 216178  635  2  2   47   72   282 0.527  17.36
 9.02 Term + 218459 218639  181  2  1   74   49    64 0.139  -2.80
 9.03 PlyA + 219510 219515    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 172329 172808  480  2  0   60   35   284 0.930  16.13
S.002 Sngl + 211334 212200  867  1  0   88   43   461 0.861  37.24
S.003 Sngl + 213742 213984  243  0  0   71   37   310 0.886  19.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_1|98_aa
MESPLQLCLPVHLRQLEDESHQADECVTLFIPQSRGYRVVDSIQIRIPKTLFHPESLRGT
QPLRISFSSSGFEGIYRETSKTPQLYPNESLSIMVWQS

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_1|297_bp
atggaatcccctctgcagttatgtttgcctgtgcatctccggcagctggaggacgaatca
catcaggctgatgagtgtgtcacgctcttcatcccccaaagcaggggctatcgagtggtt
gacagtatccaaatcagaattccaaagacgctgttccatccggaatcattaagaggaaca
cagcctcttagaatctcattcagctcctctggatttgaaggaatttacagagaaacttcc
aagacacctcagctatatccaaacgaaagcctaagcattatggtttggcagagctga

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_2|285_aa
MRTGFISVEITGDLANAVLVAWWHAENKSLIGVGSGINENDISGNECWIFIHMRVPTWSQ
NGCTLTFTIKATGRRRGLYWHVWKASLSGAKERGLGYHYCISQSEILATGELGVDTSEGT
MQKTLETEFLDFQTFTSFISYKNVSSPDKAPGLPTPAEAARSRRPALARQLLFEPSSDRK
IKSGSEGSGKHCAMSLLKAADASFGVLKNKGKNGLENKESYLPVDMEETLTEADSPTSCF
VTGEWKLVMNNECAFLLLKWLRNEPVLTCCKSGKVWVNKSVFDKR

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_2|858_bp
atgagaactggatttatcagtgtggaaatcactggtgatttggcaaatgcagttttggtg
gcttggtggcatgctgagaacaaaagcctgattggagtgggttcaggaataaatgagaac
gacatcagtgggaatgagtgttggattttcatccacatgcgtgtccccacatggtctcaa
aacggctgcactctcactttcacaatcaaggcaacaggaaggaggagggggctatactgg
catgtctggaaagcaagcctttctggggcaaaggagagggggcttgggtatcactattgt
ataagccagtcggaaatattggccacaggggagttgggagtggatacatcagagggtacc
atgcagaagacacttgaaacggagttccttgattttcaaacattcacatcctttatttca
tataagaatgtgagctccccagacaaagccccaggactcccgactcccgcggaagctgcg
aggagccgcagacctgcccttgccagacagctgctgtttgaacccagttctgaccgtaaa
atcaaaagtgggtccgagggaagcggtaaacactgtgcaatgagccttttgaaggcagct
gatgcctcatttggggtgctgaaaaacaagggaaaaaatggtcttgaaaacaaggaatca
tatttgcctgtggatatggaagagacactgaccgaggctgactctccaactagctgtttt
gtcacaggcgagtggaaactagtcatgaacaatgagtgtgcattcttgcttcttaaatgg
ctaaggaacgaaccagttttgacatgctgcaaatccggcaaagtctgggttaacaaaagt
gtgtttgacaaaagatga

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_3|432_aa
MAAATELNRPSSGDRNLERRCRPNLSREVLYEIFRSLHTLVGQRPGAARPAEVWDAVPKP
RCGRSPGPASSVGVRRTAVPVAESFTLQLSSPRVGEVGLSENPAPREAGLERMNVEKLHC
EFRRRLAFRVLFPPTYSLWELVAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFSIGDL
QEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVREFCN
VIDCNQVSRVVNTYGPQTRPEGIPGSGHKPNSMLRDCGNQAVEERLQNIEAHLRLQTGGP
VPRDIYQRIKKLEDKILELEGISPEYFQSVSFSGKRRKVQPPQPSCMKHCVIRWGGKSVR
GTLESEERSRSEKPCKSLNHWLKEPVGRAGGWPDQSGTLEKSLWLLATVCRMDHYARGKP
LSTGSVRSKKSS

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_3|1299_bp
atggctgctgccacggagcttaatcgcccgagcagcggtgacaggaacctggagcgaaga
tgcagacccaacctctcccgagaggtgctctacgaaatctttcgctccctacacaccctg
gttggacagaggccgggggcagctaggcctgcagaggtgtgggatgcggtcccgaagccg
aggtgtggaaggagcccgggcccagcctcctcggtcggagtgaggaggacggcggtaccg
gttgcagagtcgtttaccttgcagctgtcctccccaagagtgggtgaggttggcctaagt
gaaaacccggctccgagagaggcaggcttggagagaatgaatgtggaaaagcttcactgc
gagtttaggaggcgcttagcgttcagggtcctttttcctccaacttactctttatgggaa
ttggttgcaaaacttcagtctccgattaaagaggagaatacaactgctgttgaagagata
ggaagaacagaaatggggaacaaaaatgaagtaaatgacaaattttccattggcgaccta
caagaggaagaaaagcacaaagaaagtgatttaagagatgtgaaaaagacacagatccat
tttgatccagaagtagttcagataaaggctggaaaagcagaaattgacagacgaatatct
gcatttattgaaagaaagcaagctgaaatcaatgaaaacaacgtcagggaattttgcaat
gttattgattgtaatcaagtttctagagttgtgaatacatacggaccacagactagacct
gaaggaattccagggtcaggtcataaacctaacagcatgcttcgagactgtggtaatcag
gctgtagaagaacgactacaaaatattgaggcccacttgcggttacagacaggtggtcca
gtgccaagagacatttatcagagaattaaaaaacttgaggataaaatccttgaattggaa
ggcatctctcctgaatattttcagtctgtaagcttttctggaaaaagaagaaaagttcaa
ccacctcaaccgtcatgcatgaagcactgtgtcatacgatggggtgggaagagtgtgaga
gggacccttgagagtgaagaacggtccagatctgaaaagccttgcaaatcactgaatcac
tggcttaaggagccggtgggaagagcaggtggatggcccgatcagagtggcacgttagaa
aaatcactctggcttctggctacagtgtgcagaatggatcactatgctcggggtaagccc
ctgtccacaggttcagttcgttctaagaaatcatcttaa

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_4|103_aa
MGKPPLKEARGSVDPRTETPKLVAVAFLTPQNPVLDSLHLVSRQGRDRTQRTMQQVLGAK
SGKGAHHFCSHFIGQNSVIYQHLTVREAETKSPILEEVHVSKV

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_4|312_bp
atggggaaaccgccccttaaagaggctagggggtctgtggatcctagaacggaaactcct
aaacttgtggctgtggcattccttacacctcaaaatcctgtcctggattctctacatctt
gtcagcagacagggaagagatagaacacagagaaccatgcagcaggttttaggagccaag
tctggaaaaggtgcacatcacttctgctcacatttcattggtcaaaactcagtcatatac
cagcacctaactgtaagagaagctgaaactaaatctccaatactggaagaagtccacgtg
tccaaagtctga

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_5|255_aa
MASSDKVNAFVTQLDQNALKVEGGIINNCTVTMGINWDCSWTNQDEYHPSYAEKAFDKIQ
QPFMLKTLNKLSIDWTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGYPLSPLLFN
IVLEVMARAIRQEKEIKGIRLGKEEVKLSLFADDMIVYLENPLVSAQNLLKLISNFSKVS
EYKISVQKSQAFLYNNNRQTESQIMSELPFTIASKRIKYLGLQLTRDVKDLFKENYKPLL
NEIKEDRNKWKNIPC

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_5|768_bp
atggcttcaagtgacaaagtaaacgcttttgtgactcagttggaccagaacgctttgaaa
gtagaaggcggcattatcaataattgtactgtgacaatgggcataaactgggactgttcc
tggacaaaccaggatgaatatcatcctagttatgcagaaaaggcctttgacaaaattcaa
cagcccttcatgctaaaaactctcaataaattaagtattgattggacgtatctcaaaata
ataagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaa
gcattccctttgaaaactggcacaagacagggatatcctctctcaccactcctattcaac
atagtgttggaagttatggccagggcaatcaggcaggagaaagaaataaagggtattcga
ttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatttagaa
aaccccctcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctca
gaatacaaaataagtgtgcaaaaatcgcaagcattcttatacaacaataacagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaataccta
ggactccaacttacaagggatgtgaaggacctcttcaaggagaactataaaccactgctc
aacgaaataaaagaggacagaaacaaatggaaaaacattccatgttaa

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_6|196_aa
MTKKCGQVLGVEGGVQKETKTSVLNQQRRSLEADLFKAKALVRPQGLQPGSPQMLTEENS
RDDSGASQISSETLIKNLSNLTINASSESVSPLLEALLRRESVGAAVLREIEDEWLYSRR
GVRTLLSVQREKMARLRYMLLGGVRTHERRPTNKEPKGVKKESRPFKCPCSFCVSNGWDP
SENARIENQDTKPLQP

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_6|591_bp
atgacaaagaaatgtggacaggttctaggagttgagggtggtgtccagaaggaaactaaa
acttcagtcctgaaccagcaaagaaggagcttggaagcagatctttttaaagccaaggct
ctggtgagaccacagggacttcagcctgggtctccacaaatgctcaccgaagaaaattcc
cgggacgattcaggggcctctcaaatctcctccgagacgttgataaagaaccttagtaac
ttgactatcaacgctagtagcgaatctgtttcccctctattggaagctttactccgtcga
gagtctgtgggggcagcagtcctcagggaaatcgaagatgagtggctttacagcaggaga
ggagtaagaacactgctgtctgtgcagagagaaaagatggcaagattgagatacatgtta
ctgggcggagttcgtacgcatgaaagaagaccaacaaacaaggagcctaagggagttaag
aaggaatcaagaccattcaaatgtccctgcagtttctgcgtgtctaatggatgggatcct
tctgagaatgctagaatagagaatcaagacaccaagccacttcagccataa

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_7|87_aa
MAQEVPRSHSSINLSVGDLELPQPPQPLATTTLISQQPSTSRQDPPSAKRLQLAEDSDDH
QHFLTVKSENRQLNEEPEKHSPDNLSS

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_7|264_bp
atggcccaggaagttccaagatcccactcctcaatcaatcttagtgtaggagacttggaa
ttgccacaaccaccccaacctttagcaaccacaaccctgatcagtcagcagccatcaaca
tcaaggcaagatcctccatcagcaaaaagattacaacttgctgaagactcagatgatcat
cagcattttttaacagtaaagtcagaaaaccgtcagctaaatgaggaaccagagaaacac
agtccagataatctgagctcttaa

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_8|329_aa
MGRNQIRKAENSKNQSTSSPPKDCSSSLAMKQSWMENDFDELTGAGFRRLVITDFSELKE
DVQTHHKEAKNLEKRLEKWVTRINSEEKTLNYLMELKTMAQELCDACTSFSSQFDQVEER
VSVIEDQINKMKLVEKFREKRVKRNEQSLQEIQNYVKRPNLHLIGVPESDGENQTKLENT
LQDIIQENFPNLARQANIQIQEIQRTPQRCSSRRATPRHIIIRFTKVEMKEKMLRAAREK
GRERSSSPAMEQSSTENDFDKLREEGFRRSNYSELKEEVRTHGKEDKNLEKRLDEWRTTT
TNAEKSLKDLMELKTMAQELCDECTSLSS

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_8|990_bp
atggggagaaaccagatcagaaaagctgaaaattctaaaaaccagagcacctcttctcct
ccaaaggattgcagctcctcactagcaatgaaacaaagctggatggagaatgactttgac
gagttgacaggagcaggttttagaaggttggtaattacagacttctcagagctaaaggag
gatgttcaaacccatcacaaggaagctaaaaaccttgaaaaaagattagaaaaatgggta
actagaataaacagtgaagagaagaccttaaattacctgatggagctgaaaaccatggca
caagaactatgtgatgcatgcacaagcttcagtagccaatttgatcaagtggaagaaagg
gtatcagtgattgaagatcaaattaacaaaatgaagctagtagagaagttcagagaaaaa
agagtaaaaagaaacgaacaaagcctccaagaaatacagaactatgtgaaaagaccaaat
ctacatttgattggtgtacctgaaagtgatggggagaatcaaaccaagctggaaaacact
ctgcaggatattatccaggagaacttccccaacctagcaaggcaggccaacattcaaatt
caggaaatacagagaacaccacaaagatgctcctcaagaagagcaactccaagacacata
attatcaggttcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagagaaa
ggtcgggaacgcagctcctcaccagcaatggaacaaagctcgacggagaatgactttgac
aagttgagagaagaaggcttcagacgatcaaactactctgagctaaaggaggaagtgcga
acccatggcaaagaagataaaaaccttgaaaaaagattagatgaatggcgaactacaaca
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccatggcacaagaacta
tgtgacgaatgcacaagccttagtagctga

>gi568815584r:36199086_36420588|GENSCAN_predicted_peptide_9|271_aa
MFFETNENKDITYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEITKIREELKEIKTQKTLQIINESRSWFFEKINKIDRPLARLIKKKREKNQID
AIKNDKGDITTDPTKIQTTIREYYKHFYANKLENLEEMDKFLDTYTLPRLNQEEVESLNR
PITGSEIEAIINSLPTKQSPGPDGFTAEFYWRDMDEAGNHHSQQTITRTENQTPHVFTRG
WELYDQNTWTQGGEHYTPGPVVGWGLEEGQH

>gi568815584r:36199086_36420588|GENSCAN_predicted_CDS_9|816_bp
atgttctttgaaaccaatgagaacaaagacataacataccagaatctctgggacacattc
aaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaaga
tctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataactaagatcagagaagaactgaaggaaataaag
actcaaaaaacccttcaaataatcaatgaatccaggagctggttttttgaaaagatcaac
aaaattgatagaccactagcaagactaataaagaagaaaagagagaagaatcaaatagat
gcaataaaaaatgataaaggggatatcaccaccgatcccacaaaaatacaaactaccatc
agagaatactataaacacttctatgcaaataaactagaaaatctagaagaaatggataaa
ttcctggacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaataga
ccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaacaaagtcca
ggaccagacggattcacagccgaattctactggagggacatggatgaagctggaaaccat
cattctcagcaaactatcacaaggacagaaaaccaaacacctcatgttttcactcgtggg
tgggaattgtacgatcagaacacttggacacagggtggggaacattacacaccagggcct
gttgtggggtggggactggaggagggacaacattag