GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:38:24

Sequence gi568815593f:163405687_163618360 : 212674 bp : 38.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7346   7481  136  0  1   94   82    70 0.317   5.71
 1.02 Intr +  30800  30825   26  2  2  125  106     2 0.076   2.45
 1.03 Intr +  32036  32064   29  0  2  107   83    10 0.134  -0.68
 1.04 Intr +  33571  33834  264  0  0   76   95   153 0.953  11.59
 1.05 Intr +  35392  35559  168  0  0   81   93   100 0.933   9.02
 1.06 Intr +  36359  36457   99  1  0   49   95    49 0.619   1.09
 1.07 Term +  38651  38713   63  1  0  102   41    27 0.363  -3.69
 1.08 PlyA +  38756  38761    6                               1.05

 2.00 Prom +  48443  48482   40                              -4.75
 2.01 Sngl +  54212  54649  438  1  0   70   48   405 0.991  28.71
 2.02 PlyA +  55299  55304    6                               1.05

 3.00 Prom +  55712  55751   40                             -12.33
 3.01 Init +  56112  56175   64  2  1   53   79    24 0.416  -0.64
 3.02 Intr +  58170  58268   99  1  0  107   85    57 0.505   6.46
 3.03 Intr +  59037  59116   80  1  2   90  100    56 0.513   5.35
 3.04 Intr +  63955  64143  189  0  0   70   65   130 0.492   7.76
 3.05 Intr +  65677  65777  101  0  2   58   93    59 0.946   1.39
 3.06 Intr +  67493  67567   75  2  0   47   58   120 0.859   2.61
 3.07 Intr +  67693  67871  179  1  2   45   62   167 0.981   8.44
 3.08 Intr +  68371  68519  149  2  2   74   25   135 0.948   4.83
 3.09 Intr +  69772  69986  215  0  2   30    9   257 0.899   8.59
 3.10 Intr +  72998  73114  117  2  0   77   63   112 0.964   6.26
 3.11 Intr +  76956  77102  147  0  0   56   71   207 0.997  14.23
 3.12 Intr +  77334  77486  153  0  0   64   84   142 0.996   9.67
 3.13 Intr +  77582  77681  100  2  1   83   72    86 0.995   5.69
 3.14 Intr +  84704  84866  163  1  1  100  116    95 0.998  12.13
 3.15 Intr +  91243  91458  216  2  0   93   70   107 0.676   6.95
 3.16 Term +  91546  91637   92  2  2   87   39    75 0.730  -0.60
 3.17 PlyA +  91761  91766    6                               1.05

 4.00 Prom +  95019  95058   40                              -4.85
 4.01 Init +  97709  97738   30  1  0   82  110    42 0.750   5.59
 4.02 Intr + 106316 106510  195  1  0   85   80    92 0.929   6.79
 4.03 Intr + 107869 107983  115  0  1   42   95   115 0.972   6.70
 4.04 Intr + 108156 108308  153  1  0   82   82   134 0.998  11.32
 4.05 Intr + 110832 111025  194  1  2  104   99   201 0.999  21.09
 4.06 Intr + 111875 111988  114  1  0   68   95    30 0.725   1.42
 4.07 Term + 112507 112677  171  0  0   80   29   169 0.999   7.04
 4.08 PlyA + 113440 113445    6                               1.05

 5.06 PlyA - 114355 114350    6                               1.05
 5.05 Term - 118062 117972   91  2  1   74   47    85 0.568  -0.79
 5.04 Intr - 121586 121471  116  2  2   21   92    75 0.086  -0.47
 5.03 Intr - 125850 125805   46  2  1  107   81    34 0.416   2.09
 5.02 Intr - 129151 128978  174  0  0   67   86    78 0.856   3.63
 5.01 Init - 129838 129651  188  1  2   91  103    92 0.950   9.59
 5.00 Prom - 131111 131072   40                              -4.45

 6.04 PlyA - 132063 132058    6                               1.05
 6.03 Term - 154515 154324  192  0  0   70   46   143 0.853   4.74
 6.02 Intr - 159446 159322  125  0  2   76   83   119 0.808   9.58
 6.01 Init - 176331 176244   88  0  1   88   32   135 0.888   8.75
 6.00 Prom - 176534 176495   40                              -5.85

 7.02 PlyA - 177364 177359    6                               1.05
 7.01 Sngl - 187054 186203  852  1  0   78   48   222 0.726  12.75
 7.00 Prom - 204281 204242   40                              -4.85

 8.03 PlyA - 205634 205629    6                               1.05
 8.02 Term - 207194 207138   57  2  0   89   41    86 0.286   0.71
 8.01 Intr - 209767 209611  157  0  1   14   97   196 0.298  12.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_1|261_aa
XPLEVGGSTAAMTLGRKAPCQADLGFRLLELSTPLAVSSAALPFSRVLFCGIALGLSDLI
SWGEMIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV
KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP
LATDLIRISQYRFTVSDLMRMEKIVLEKPSVLALSIIALEIQAQKCVELTEGIECLQKHS
KKTGDICIYDKNFYTEPTASN

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_1|786_bp
nggccccttgaagtgggcggctccaccgcagccatgacactggggcgcaaggcaccttgc
caagccgacctaggtttcaggcttctggagttgagcactccattggcagtttcttctgca
gctttgccattctctagagttttgttctgtggcattgccttgggcctctcggatctgata
tcgtggggtgagatgatagaggtactgacaacaactgactctcagaaactgctacaccag
ctgaatgccctgttggaacaggagtctagatgtcagccaaaggtctgtggtttgagacta
attgagtctgcacacgataatggcctcagaatgactgcaagactaagggactttgaagta
aaagatcttcttagtctaactcagttctttggctttgacacagagacattttctctagct
gtgaatttactggacagattcctgtctaaaatgaaggtacagcccaagcaccttgggtgt
gttggactgagctgcttttatttggctgtaaaatcaatagaagaggaaaggaatgtccca
ttggcaactgacttgatccgaataagtcaatataggtttacggtttcagacttgatgaga
atggaaaagattgtattggagaagccttctgtgttggcattgtctatcattgcattagag
atccaagcacagaagtgtgtagagttaacagaaggaatagaatgtcttcagaaacattcc
aagaaaacaggtgacatttgtatctacgataaaaatttttatacagaacctactgcctca
aactga

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_2|145_aa
MPALEAALDILGARAWRHLNFNEHLLQGLVPLAPRGPARYHPTPLLKRGRHNPVPPGRGR
TRRSRAHARNPTLRLRLGLSARVTAHAQERKLALWCACSFFPLNGRLRHRQAPDERTEIQ
KSSHATNNGTELEPVKPELTTPSPK

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_2|438_bp
atgccggctctggaggccgcactggatatcctgggcgcgcgtgcctggcggcacctgaac
ttcaatgaacacctcctccaaggtctggtaccactggccccacggggtcccgcacggtac
caccccactccgctcctcaaacggggccgacataatccagtccctcccggccgcggccgc
accaggcggagccgagcgcacgcgcggaatcccacgcttaggctacgcctcggcctctcc
gctcgggtcactgcgcatgcgcaggaacgcaagctagcgctttggtgtgcgtgttcgttt
ttccctttgaatggccgtttacggcaccggcaggccccggatgaaagaactgaaatccag
aaaagttcacatgcaacgaacaatgggacagaattggaaccagtgaagccggaactcact
acaccgtcccctaagtga

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_3|712_aa
MLYAGTVLLDLVYSFQKPSEEGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNL
NVDKDTTLPASARKVKSSESKIRVLLQERGAQDRRIQDLETELEKMEARLNAALREKTSL
SANNATLEKQLIELTRTNELLKSKGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVS
IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEEN
IVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQK
ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERL
VKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQ
FESYKALTASEIEDLKLENSSLQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTK
SALKETEIKEITVSFLQKITDLQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINK
WRLLYEELYNKTKPFQEVSKLRCQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKE
NFALKTPLKEEQLLVPKSVLVTVLQRNRTSKRYIEKLIYYEELADMIMKAEKACNLPFAG
WRPRKAGVVQYKLESLRTIIAEAFNGPSISFSASTNSNINLIQKYPHRQPLK

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_3|2139_bp
atgctgtatgctgggactgtgctactagatcttgtttattccttccaaaagccaagtgag
gaaggttgtgcaccatctccaggtgcttatgatgttaaaactttagaagtattgaaagga
ccagtatcctttcagaaatcacaaagatttaaacaacaaaaagaatctaaacaaaatctt
aatgttgacaaagatactaccttgcctgcttcagctagaaaagttaagtcttcggaatca
aagattcgtgttcttctacaggaacgtggtgcccaggacaggcggatccaggatctggaa
actgagttggaaaagatggaagcaaggctaaatgctgcactaagggaaaaaacatctctc
tctgcaaataatgctacactggaaaaacaacttattgaattgaccaggactaatgaacta
ctaaaatctaagggtatgatggctaagcaagaaggcatggagatgaagctgcaggtcacc
caaaggagtctcgaagagtctcaagggaaaatagcccaactggagggaaaacttgtttca
atagagaaagaaaagattgatgaaaaatctgaaacagaaaaactcttggaatacatcgaa
gaaattagttgtgcttcagatcaagtggaaaaatacaagctagatattgcccagttagaa
gaaaatttgaaagagaagaatgatgaaattttaagccttaagcagtctcttgaggagaat
attgttatattatctaaacaagtagaagatctaaatgtgaaatgtcagctgcttgaaaaa
gaaaaagaagaccatgtcaacaggaatagagaacacaacgaaaatctaaatgcagagatg
caaaacttaaaacagaagtttattcttgaacaacaggaacgtgaaaagcttcaacaaaaa
gaattacaaattgattcacttctgcaacaagagaaagaattatcttcgagtcttcatcag
aagctctgttcttttcaagaggaaatggttaaagagaagaatctgtttgaggaagaatta
aagcaaacactggatgagcttgataaattacagcaaaaggaggaacaagctgaaaggctg
gtcaagcaattggaagaggaagcaaaatctagagctgaagaattaaaactcctagaagaa
aagctgaaagggaaggaggctgaactggagaaaagtagtgctgctcatacccaggccacc
ctgcttttgcaggaaaagtatgacagtatggtgcaaagccttgaagatgttactgctcaa
tttgaaagctataaagcgttaacagccagtgagatagaagatcttaagctggagaactca
tcattacaggaaaaagcggccaaggctgggaaaaatgcagaggatgttcagcatcagatt
ttggcaactgagagctcaaatcaagaatatgtaaggatgcttctagatctgcagaccaag
tcagcactaaaggaaacagaaattaaagaaatcacagtttcttttcttcaaaaaataact
gatttgcagaaccaactcaagcaacaggaggaagactttagaaaacagctggaagatgaa
gaaggaagaaaagctgaaaaagaaaatacaacagcagaattaactgaagaaattaacaag
tggcgtctcctctatgaagaactatataataaaacaaaaccttttcaggaagtatcaaaa
ctccgctgtcagcttgctaaaaaaaaacaaagtgagacaaaacttcaagaggaattgaat
aaagttctaggtatcaaacactttgatccttcaaaggcttttcatcatgaaagtaaagaa
aattttgccctgaagaccccattaaaagaagaacaactcttggtaccaaaatctgtatta
gtcacagttctccagagaaacagaaccagtaagagatacatagaaaagttgatttactat
gaggaattggctgacatgattatgaaggctgagaaggcttgcaacctgccatttgcaggc
tggagacccaggaaagcaggtgttgttcagtacaagcttgaaagcctgagaaccatcata
gcagaagccttcaatggaccctcaatcagctttagtgcatccactaattcaaatattaac
ctcattcagaaataccctcacagacagcccctgaagtag

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_4|323_aa
MPEMPEDMEQEEVNIPNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVN
LLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFL
IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEK
LEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWS
GNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPF
RIGIKESLWPFLIDKRWRQTVFH

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_4|972_bp
atgcctgaaatgccagaggacatggagcaggaggaagttaacatccctaataggagggtt
ctggttactggtgccactgggcttcttggcagagctgtacacaaagaatttcagcagaat
aattggcatgcagttggctgtggtttcagaagagcaagaccaaaatttgaacaggttaat
ctgttggattctaatgcagttcatcacatcattcatgattttcagccccatgttatagta
cattgtgcagcagagagaagaccagatgttgtagaaaatcagccagatgctgcctctcaa
cttaatgtggatgcttctgggaatttagcaaaggaagcagctgctgttggagcatttctc
atctacattagctcagattatgtatttgatggaacaaatccaccttacagagaggaagac
ataccagctcccctaaatttgtatggcaaaacaaaattagatggagaaaaggctgtcctg
gagaacaatctaggagctgctgttttgaggattcctattctgtatggggaagttgaaaag
ctcgaagaaagtgctgtgactgttatgtttgataaagtgcagttcagcaacaagtcagca
aacatggatcactggcagcagaggttccccacacatgtcaaagatgtggccactgtgtgc
cggcagctagcagagaagagaatgctggatccatcaattaagggaacctttcactggtct
ggcaatgaacagatgactaagtatgaaatggcatgtgcaattgcagatgccttcaacctc
cccagcagtcacttaagacctattactgacagccctgtcctaggagcacaacgtccgaga
aatgctcagcttgactgctccaaattggagaccttgggcattggccaacgaacaccattt
cgaattggaatcaaagaatcactttggcctttcctcattgacaagagatggagacaaacg
gtctttcattag

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_5|204_aa
MAREDSTATTAEAFAMGHCHSWSTRLAHQPFVIRYKPTSRWLLLHFISSFKTFPEDHFTY
KNINISVLLLRKLKLSQVAKLAQAQTSRVFICKCQDLHSNSGLCDLKADTLPITRASEKQ
GLRTGPQAKEGDYLQKALTVEPSHLDLLWNLSQEATERCAAKTRKHNKVKEMKHSFGVNC
NYRRTLLKARTIIPLSTFQGPYVF

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_5|615_bp
atggccagggaggattctactgccaccactgccgaggcatttgccatgggtcattgccat
tcttggagcaccagactggcccatcagcccttcgtgatacgatacaaacccacaagcagg
tggttgctgctccacttcatttcctcattcaaaacatttcctgaagatcatttcacttac
aagaacataaatatctctgttttactgttgaggaaactaaagctcagtcaagttgctaaa
cttgcccaagctcaaacttccagggtgtttatatgtaaatgccaagatttgcattcaaac
tcaggtctctgtgaccttaaagctgatactctcccaattacaagagccagtgaaaaacag
gggttgaggacagggccgcaagccaaggaaggtgattacctccaaaaggcactcacagtc
gagccttcacatttggatctgttatggaacctttctcaggaagctactgaaagatgtgca
gccaaaactagaaagcacaacaaagtgaaagaaatgaaacacagtttcggggtgaattgt
aactacagacgaacacttctgaaggccagaaccatcatccctctttcaactttccaagga
ccttatgtgttctaa

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_6|134_aa
MWIDITQPDQTLMNKKSPLITCLDVTALTRRVSWLVLSEDLQNPERLGDIRNPAGPSPSV
KGTLQSFCDRGREILISYHFTCMRMAMTTKTITSLGEDAQNWNLHTLLLGMENGAAAVEN
SSVVSENVKYRATI

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_6|405_bp
atgtggattgacatcacccaacctgaccagacgctgatgaacaagaagagtccactgatc
acttgcttggatgtcacagcactgacaagaagagtgagctggttagttctgagtgaagac
ctccagaacccagagagactgggggacattaggaacccagcaggaccaagcccatccgtg
aaaggaacacttcagagtttctgtgaccgcggaagagaaatcctaataagttatcacttc
acatgcatgaggatggcaatgaccacaaagacaataacaagtcttggtgaggatgcacag
aactggaaccttcatacgttgctgctagggatggaaaatggtgcagctgccgtggaaaac
agttcagtagtttctgaaaatgttaaatatagagctaccatatga

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_7|283_aa
MRPDFKLYYKATVTKTAWYLYQNRDIDQWNRIEPSEIMPRIYNYLIFDKPDKNKKWGKDS
LFNKWCSENWLAICRKLKLDPFLTPYTKINSRWIKELNVRPKTIKTLEENLGNTIQDIGM
GKDFISKTPKAMATKAKIDKWDLIKLKSFCTAKETTITVNRQPTEWEKILAIYSSDKGLI
SRIYKEHKQIYKKKTNNPINKWAKDMNRHFSKEDIYAANRHMKKCSSALAIREMQIKTTM
RYHLTPVRMAIIKKSGNNRCWRGCGEIGTLLYCWWDCKLVQPL

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_7|852_bp
atgcgacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtacttg
tatcaaaacagagatatagaccaatggaatagaatagagccctcagaaataatgccacgt
atctacaactatctgatctttgacaaacctgataaaaacaagaaatggggaaaagattcc
ctatttaataaatggtgctcagaaaactggctagccatatgtagaaagctgaaactggat
cccttccttacaccttatacaaaaattaattcaagatggattaaagaattaaatgttaga
cctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatg
ggcaaggacttcatatctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaa
tgggatctaattaaattaaagagcttctgcacagcaaaagaaactaccatcacagtgaac
aggcaacctacagaatgggagaaaattttggcaatctactcatctgacaaagggctaata
tccagaatctacaaagaacacaaacaaatttacaagaaaaaaacaaacaaccccatcaac
aagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacaga
cacatgaaaaaatgctcatcagcactggccatcagagaaatgcaaatcaaaaccacaatg
agatatcatctcacaccagttagaatggcgatcattaaaaagtcagggaacaacaggtgc
tggagaggatgtggagaaataggaacacttttatactgttggtgggactgtaaactagtt
caaccattgtga

>gi568815593f:163405687_163618360|GENSCAN_predicted_peptide_8|71_aa
XLCPVPPAKKNDSRSSSTAPPPRTGVTTYKQLAGLWEFESKALSQSKRDDDEPNQLLLAL
REPSLQKAEST

>gi568815593f:163405687_163618360|GENSCAN_predicted_CDS_8|216_bp
nncctttgcccagtgcccccagctaagaagaatgattcccgatcgagcagcacggcacca
ccaccaagaacaggggttactacctataaacaacttgcaggattgtgggagtttgaatca
aaagcactgtcccaatcaaagcgagatgatgatgaaccgaaccagctgcttctagctctc
cgagagccctctcttcagaaggcagagtcgacctga