Result of FASTA (ccds) for pF1KE0124
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0124, 327 aa
  1>>>pF1KE0124 327 - 327 aa - 327 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5309+/-0.000728; mu= 8.3988+/- 0.044
 mean_var=148.8840+/-30.093, 0's: 0 Z-trim(114.3): 10  B-trim: 0 in 0/53
 Lambda= 0.105111
 statistics sampled from 14872 (14878) to 14872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.457), width:  16
 Scan time:  2.990

The best scores are:                                      opt bits E(32554)
CCDS11910.1 MAPRE2 gene_id:10982|Hs108|chr18       ( 327) 2202 344.7   6e-95
CCDS45850.1 MAPRE2 gene_id:10982|Hs108|chr18       ( 315) 1930 303.4 1.5e-82
CCDS45851.1 MAPRE2 gene_id:10982|Hs108|chr18       ( 284) 1898 298.6   4e-81
CCDS58619.1 MAPRE2 gene_id:10982|Hs108|chr18       ( 274) 1646 260.3 1.2e-69
CCDS1731.1 MAPRE3 gene_id:22924|Hs108|chr2         ( 281) 1142 183.9 1.3e-46
CCDS13208.1 MAPRE1 gene_id:22919|Hs108|chr20       ( 268) 1018 165.1 5.7e-41


>>CCDS11910.1 MAPRE2 gene_id:10982|Hs108|chr18            (327 aa)
 initn: 2202 init1: 2202 opt: 2202  Z-score: 1818.1  bits: 344.7 E(32554): 6e-95
Smith-Waterman score: 2202; 99.7% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS11 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
              250       260       270       280       290       300

              310       320       
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
       :::::::::::::::::::::::::::
CCDS11 EEHEGHTEEPEAEEQAHEQQPPQQEEY
              310       320       

>>CCDS45850.1 MAPRE2 gene_id:10982|Hs108|chr18            (315 aa)
 initn: 1926 init1: 1926 opt: 1930  Z-score: 1595.5  bits: 303.4 E(32554): 1.5e-82
Smith-Waterman score: 1930; 91.2% identity (94.1% similar) in 320 aa overlap (8-327:1-315)

               10        20        30        40        50        60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
              .. : ...  . : :..   : ::         ::::::::::::::::::::
CCDS45        MKQNRDQKCPVSQRNSSFQQPGRKPGCS-----SWGMAVNVYSTSITQETMSR
                      10        20             30        40        

               70        80        90       100       110       120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
       50        60        70        80        90       100        

              130       140       150       160       170       180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
      110       120       130       140       150       160        

              190       200       210       220       230       240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS45 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
      170       180       190       200       210       220        

              250       260       270       280       290       300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
      230       240       250       260       270       280        

              310       320       
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
       :::::::::::::::::::::::::::
CCDS45 EEHEGHTEEPEAEEQAHEQQPPQQEEY
      290       300       310     

>>CCDS45851.1 MAPRE2 gene_id:10982|Hs108|chr18            (284 aa)
 initn: 1898 init1: 1898 opt: 1898  Z-score: 1569.9  bits: 298.6 E(32554): 4e-81
Smith-Waterman score: 1898; 99.6% identity (100.0% similar) in 284 aa overlap (44-327:1-284)

            20        30        40        50        60        70   
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
                                     ::::::::::::::::::::::::::::::
CCDS45                               MAVNVYSTSITQETMSRHDIIAWVNDIVSL
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDLETQVIQLNEQVHS
       ::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS45 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDLETQVIQLNEQVHS
              160       170       180       190       200       210

           260       270       280       290       300       310   
pF1KE0 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
              220       230       240       250       260       270

           320       
pF1KE0 EQAHEQQPPQQEEY
       ::::::::::::::
CCDS45 EQAHEQQPPQQEEY
              280    

>>CCDS58619.1 MAPRE2 gene_id:10982|Hs108|chr18            (274 aa)
 initn: 1646 init1: 1646 opt: 1646  Z-score: 1363.6  bits: 260.3 E(32554): 1.2e-69
Smith-Waterman score: 1646; 99.2% identity (100.0% similar) in 245 aa overlap (83-327:30-274)

             60        70        80        90       100       110  
pF1KE0 ITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEH
                                     .:::::::::::::::::::::::::::::
CCDS58  MARTTTTSSRIITGPSFLSGSTQCAGSVPTGAAYCQFMDMLFPGCISLKKVKFQAKLEH
                10        20        30        40        50         

            120       130       140       150       160       170  
pF1KE0 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
      60        70        80        90       100       110         

            180       190       200       210       220       230  
pF1KE0 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGS
       :::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS58 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGS
     120       130       140       150       160       170         

            240       250       260       270       280       290  
pF1KE0 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
     180       190       200       210       220       230         

            300       310       320       
pF1KE0 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
       :::::::::::::::::::::::::::::::::::
CCDS58 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
     240       250       260       270    

>>CCDS1731.1 MAPRE3 gene_id:22924|Hs108|chr2              (281 aa)
 initn: 1173 init1: 880 opt: 1142  Z-score: 950.3  bits: 183.9 E(32554): 1.3e-46
Smith-Waterman score: 1142; 59.2% identity (83.0% similar) in 289 aa overlap (44-327:1-281)

            20        30        40        50        60        70   
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
                                     :::::::::.:.:..::::..::::: . :
CCDS17                               MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
       ::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
CCDS17 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
       :::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.::.::::  :
CCDS17 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSK
              100       110       120       130       140       150

           200       210        220           230       240        
pF1KE0 KSHHANSPTAGAAKSSPAA-KPGSTPSRPSSTKRA----SSSGSASKSDKDLETQVIQLN
       :   .  :     ..::.. :  .: .: :..       ..  :: .. .. ..:...::
CCDS17 KLIGTAVPQ----RTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELN
                  160       170       180       190       200      

      250       260       270       280       290       300        
pF1KE0 EQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTE
       .:. .:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.::  .  :
CCDS17 QQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPE
        210       220       230       240       250       260      

      310       320       
pF1KE0 EPEAEEQAHEQQPPQQEEY
       . : ::  :.:.  .:.::
CCDS17 DDEIEE--HQQE--DQDEY
        270           280 

>>CCDS13208.1 MAPRE1 gene_id:22919|Hs108|chr20            (268 aa)
 initn: 1050 init1: 784 opt: 1018  Z-score: 849.0  bits: 165.1 E(32554): 5.7e-41
Smith-Waterman score: 1021; 55.7% identity (79.1% similar) in 282 aa overlap (44-313:1-267)

            20        30        40        50        60        70   
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
                                     :::::::::.:....::::..::.:. ..:
CCDS13                               MAVNVYSTSVTSDNLSRHDMLAWINESLQL
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
       : ::.::::::::::::::::::: :.:::::::::::::::.:::.:::.::::.:::.
CCDS13 NLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
       :::.:::::.::::..:.::::::.:::::::.:::: :::::..   :.     .: ::
CCDS13 IPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPK
              100       110       120       130       140       150

           200       210       220       230           240         
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSAS----KSDKDL---ETQVIQ
       :               : .. ...:.:: ::.:.... .:.    ...  .   . .. .
CCDS13 K---------------PLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAE
                             160       170       180       190     

        250       260       270       280       290       300      
pF1KE0 LNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEE----
       : .::. :::..: .::::::::::::.:::.:::.  ::: ..::..:::::..:    
CCDS13 LMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVI
         200       210       220       230       240       250     

             310       320       
pF1KE0 -HEGHTEEPEAEEQAHEQQPPQQEEY
         ::  .: . :              
CCDS13 PDEGGPQEEQEEY             
         260                     




327 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:01:00 2016 done: Fri Nov  4 02:01:01 2016
 Total Scan time:  2.990 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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