GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:05:01

Sequence gi568815592f:36030583_36239370 : 208788 bp : 43.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  22117  22246  130  1  1  106  101    61 0.936   9.90
 1.02 Intr +  28707  28765   59  2  2  116   56    41 0.195   1.38
 1.03 Intr +  42291  42402  112  0  1   88   87    76 0.971   7.88
 1.04 Intr +  42464  42523   60  1  0  122  103   -19 0.788   1.93
 1.05 Intr +  43467  43514   48  2  0  100   93    38 0.954   4.38
 1.06 Intr +  45266  45380  115  1  1  101   67   157 0.998  14.92
 1.07 Term +  53330  53538  209  0  2   54   42    72 0.246  -3.30
 1.08 PlyA +  54509  54514    6                               1.05

 2.03 PlyA -  59567  59562    6                               1.05
 2.02 Term -  61861  61407  455  2  2   62   48   322 0.983  20.92
 2.01 Init -  62232  62205   28  0  1   82   40    32 0.676  -3.39
 2.00 Prom -  63589  63550   40                              -7.46

 3.00 Prom +  63854  63893   40                              -3.96
 3.01 Init +  64736  64843  108  1  0   57   49   117 0.443   2.95
 3.02 Intr +  71989  72067   79  0  1   69  106    37 0.494   2.72
 3.03 Intr +  76873  77046  174  2  0   40  106   222 0.839  19.11
 3.04 Term +  77798  77865   68  0  2   89   53    62 0.912   0.90
 3.05 PlyA +  79264  79269    6                               1.05

 4.00 Prom +  84902  84941   40                              -3.66
 4.01 Init +  88709  88787   79  1  1   90   61    58 0.568   4.52
 4.02 Term +  89181  89290  110  1  2   31   48   137 0.588   2.67
 4.03 PlyA +  89371  89376    6                               1.05

 5.00 Prom +  97887  97926   40                              -6.46
 5.01 Init + 100001 100119  119  1  2   71   69   275 0.949  23.57
 5.02 Intr + 100689 100818  130  0  1   65   61   347 0.836  30.40
 5.03 Intr + 102039 102097   59  2  2   86   70    92 0.977   4.88
 5.04 Intr + 105171 105279  109  0  1   66   98   197 0.979  18.79
 5.05 Intr + 105437 105466   30  1  0   96   96     4 0.556   0.33
 5.06 Intr + 105902 105949   48  1  0  114  113    71 0.997  11.08
 5.07 Intr + 106074 106272  199  2  1   73   61   293 0.865  24.02
 5.08 Intr + 107783 107862   80  0  2  -31   64   153 0.890   0.27
 5.09 Intr + 108120 108198   79  2  1  123   96    40 0.973   7.42
 5.10 Intr + 108297 108473  177  1  0   92   57   335 0.983  30.69
 5.11 Term + 108712 108791   80  2  2   71   50   132 0.974   5.63
 5.12 PlyA + 109448 109453    6                               1.05

 6.00 Prom + 117713 117752   40                              -3.26
 6.01 Init + 166392 166561  170  2  2   67   88   116 0.576   6.51
 6.02 Intr + 168630 168685   56  0  2   68   56    50 0.452  -1.58
 6.03 Intr + 169715 171188 1474  0  1  107  115  1575 0.652 150.89
 6.04 Intr + 174076 174232  157  1  1   61   96    24 0.928   0.51
 6.05 Intr + 176731 176862  132  0  0   76  110   245 0.999  26.34
 6.06 Intr + 179205 179384  180  2  0  136    1   181 0.751  14.26
 6.07 Intr + 179634 179946  313  2  1   36   93   383 0.754  29.36
 6.08 Intr + 180676 180978  303  2  0  104   78   546 0.998  51.76
 6.09 Intr + 183298 183804  507  2  0   84   60   302 0.598  19.95
 6.10 Intr + 187335 187428   94  1  1   86  110    67 0.657   7.72
 6.11 Intr + 191586 191683   98  0  2   98   94   159 0.999  17.15
 6.12 Intr + 194685 194782   98  1  2  108   97   159 0.999  18.53
 6.13 Intr + 198320 198474  155  1  2  117   53   197 0.993  17.97
 6.14 Intr + 199844 200023  180  2  0   87   67   250 0.597  21.78
 6.15 Intr + 200074 200134   61  1  1  105   66    25 0.533   0.74
 6.16 Term + 202751 202876  126  1  0   82   37    70 0.132  -0.42
 6.17 PlyA + 203737 203742    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_1|244_aa
XAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE
FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKGLNKQVNNFSNGKFKHIKS
QDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTGVARH
LMQEHSHWHQVGAPLGRSSQRKEQAAIFAVLQSPLVTPPGTGGTQAKSLEWTPSKLQQPY
GRGA

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_1|735_bp
nntgctgcttttgacacaaaaacggggttacgtgtggcagtgaagaagctctccagacca
tttcagtccatcattcatgcgaaaagaacctacagagaactgcggttacttaaacatatg
aaacatgaaaatgtgattggtctgttggacgtttttacacctgcaaggtctctggaggaa
ttcaatgatgtgtatctggtgacccatctcatgggggcagatctgaacaacattgtgaaa
tgtcagaagcttacagatgaccatgttcagttccttatctaccaaattctccgaggtcta
aagggcttaaacaaacaagtaaacaacttttctaatggaaaattcaaacacataaaatca
caggacctaaaacctagtaatctagctgtgaatgaagactgtgagctgaagattctggat
tttggactggctcggcacacagatgatgaaatgacaggctacgtggccactaggtggtac
agggctcctgagatcatgctgaactggatgcattacaaccagacaggggtcgccagacac
cttatgcaagagcattcccactggcatcaggttggtgcccctctgggacggagctcccag
aggaaggaacaggcagccatctttgctgttctgcagtctccactggtgacacctccaggt
acaggagggacccaggcaaagagtctggagtggacccccagcaaactgcagcagccctat
ggaagaggggcctga

>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_2|160_aa
MAHPFITSGENASLRVYRSGETVLTTNGWLLHRVPCRELIEDGETPGAAALWELEEETGY
KGDAAECSPVVYMDPGLSNCTTHIVTVIINGDDAENVRPKPKPGDGEFVEVISLPKNDLL
QGLDALVAEKHLTVDAKVYSHALALKHANVKPSEVPVLKF

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_2|483_bp
atggcacatcctttcatcacctcgggagagaacgcttcactacgagtgtatcgttctggt
gaaacagtcctgaccaccaatgggtggctactgcatagagttccctgcagggaactcata
gaagatggtgaaaccccaggagcagctgctctttgggagcttgaggaagaaactggctac
aaaggggacgctgctgaatgttctccagtggtctatatggacccaggtttgtcaaactgt
accacacacatcgtgacagtaatcattaacggagatgacgcagaaaatgtaaggcccaag
ccaaagccaggggatggagaatttgtggaagtcatttcgttacccaagaatgacctgctg
cagggactcgatgctctcgtagctgaaaaacatcttacagtggatgccaaagtctattcc
catgctctagcactgaaacatgcaaatgtgaagccatctgaagtgcccgtcctgaaattt
taa

>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_3|142_aa
MALLKEHAMGERPLLATLPHSACYSQCERRGFPFQRARNYIQSLTQMPKMNFANVFIGAN
PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK
SLTYDEVISFVPPPLDQEEMES

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_3|429_bp
atggcgctcctaaaggaacatgcgatgggagagcgccctctgctggcgactctccctcat
agtgcctgctatagccagtgtgagaggcgaggcttccctttccagagggcaagaaactat
attcagtctttgactcagatgccgaagatgaactttgcgaatgtatttattggtgccaat
cccctggctgtcgacttgctggagaagatgcttgtattggactcagataagagaattaca
gcggcccaagcccttgcacatgcctactttgctcagtaccacgatcctgatgatgaacca
gtggccgatccttatgatcagtcctttgaaagcagggacctccttatagatgagtggaaa
agcctgacctatgatgaagtcatcagctttgtgccaccaccccttgaccaagaagagatg
gagtcctga

>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_4|62_aa
MQEKANEFARAKTVELSYIGVHLAGFRRPPQRGITQQKHVSSAEAEKQRRLNILADLTNN
LK

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_4|189_bp
atgcaggaaaaggcaaatgaatttgcccgtgcaaaaactgtagagctttcatacattggc
gtccatttggcaggattcagacggcccccacaacgaggaattacccagcagaaacatgtc
agcagtgccgaggctgagaaacagagacgactcaacatcttggcagatctcaccaacaac
cttaagtga

>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_5|369_aa
MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF
QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM
EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT
GYVVTRWYRAPEVILSWMHYNQTGQWSMPERAVLGPSGHSVLTDCWAPDSPDLDQLTQIL
KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR
LTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSPIARKD
SRRRSGMKL

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_5|1110_bp
atgagcctcatccggaaaaagggcttctacaagcaggacgtcaacaagacagcctgggag
ctgcccaagacctacgtgtccccgacgcacgtcggcagcggggcctatggctccgtgtgc
tcggccatcgacaagcggtcaggggagaaggtggccatcaagaagctgagccgacccttt
cagtccgagatcttcgccaagcgcgcctaccgggagctgctgctgctgaagcacatgcag
catgagaacgtcattgggctcctggatgtcttcaccccagcctcctccctgcgcaacttc
tatgacttctacctggtgatgcccttcatgcagacggatctgcagaagatcatggggatg
gagttcagtgaggagaagatccagtacctggtgtatcagatgctcaaaggccttaagtac
atccactctgctggggtcgtgcacagggacctgaagccaggcaacctggctgtgaatgag
gactgtgaactgaagattctggattttgggctggcgcgacatgcagacgccgagatgact
ggctacgtggtgacccgctggtaccgagcccccgaggtgatcctcagctggatgcactac
aaccagacaggtcagtggtcaatgcctgagagggcggtcctggggccatctggtcactcg
gtgctgactgactgctgggccccagacagtccagacctggaccagctgacccagatcctg
aaagtgaccggggtgcctggcacggagtttgtgcagaagctgaacgacaaagcggccaaa
tcctacatccagtccctgccacagacccccaggaaggatttcactcagctgttcccacgg
gccagcccccaggctgcggacctgctggagaagatgctggagctagacgtggacaagcgc
ctgacggccgcgcaggccctcacccatcccttctttgaacccttccgggaccctgaggaa
gagacggaggcccagcagccgtttgatgattccttagaacacgagaaactcacagtggat
gaatggaagcagcacatctacaaggagattgtgaacttcagccccattgcccggaaggac
tcacggcgccggagtggcatgaagctgtag

>gi568815592f:36030583_36239370|GENSCAN_predicted_peptide_6|1367_aa
MGAAAGPDRAGAGASGPSGTRDCTGGNRRSGGLSEQGGGGAKALSWSEGGGREGEGGSAA
ALDSHRSANPTVNCACLSPQFPGAMRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQ
AQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPGKSKKPSSK
GKKKESCSKHASGTSFHLPQPSFRMVDSGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDM
DEEDLAWLDMVNEKRRVDGHSLVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCC
VCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCILCPNKG
GAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAA
IQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTIFTVRKTAYCEAHSPPGAATARR
KGDSPRSISETGDEEGLKEGDGEEEEEEEVEEEEQEAQGGVSGSLKGVPKKSKMSLKQKI
KKEPEEAGQDTPSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNG
VPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLK
REQVKVQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEASSPYFPSSKFFLN
WNRVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAA
VRLRDLGGAILRHARRQAENIGYDPERGTHLPESPKLEDFYRFSWEDVDNILIPENRAHL
SPEVQLKELLEKLDLVSAMRSSGARTRRVRLLRREINALRQKLAQPPPPQPPSLNKTVSN
GELPAGPQGDAAVLEQALQEEPEDDGDRDDSKLPPPPTLEPTGPAPSLSEQESPPEPPTL
KPINDSKPPSRFLKPRKVEEDELLEKSPLQLGNEPLQRLLSDNGINRLSLMAPDTPAGTP
LSGVGRRTSVLFKKAKNGVKLQRSPDRVLENGEDHGVAGSPASPASIEEERHSRKRPRSR
SCSESEGERSPQQEEETGMTNGFGKHTESGSDSECSLGLSGGLAFEACSGLTPPKRSRGK
PALSRVPFLEGVNGDSDYNGSGRSLLLPFEDRGDLEPLELVWAKCRGYPSYPALIIDPKM
PREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVE
DTVDKLKMLEGRKTSIRKSVQVAYDRAMIHLSRVRGPHSFVTSSYLAQRSLFCPCQMYGR
QLPPLMEPLLLIQKESDPLDTPDLPSLLNLRLKDAHTSYVTAAVLIL

>gi568815592f:36030583_36239370|GENSCAN_predicted_CDS_6|4104_bp
atgggggcggcagcggggccggacagagcgggggcgggggcatcggggccttcggggacc
agggactgcacggggggaaaccggagaagcggggggctttccgagcagggcgggggcggt
gcgaaagctctctcctggagcgagggcggcggcagggaaggagaaggcggatcagcggct
gctttggattctcataggagcgcgaaccctactgtgaactgcgcatgcctgtcccctcag
ttcccaggtgccatgaggaagcctcgtcggaagtcccggcagaatgccgagggccggcgt
tccccgtccccctacagtctcaagtgctcacccacccgggagaccctgacatatgcccag
gcccagcggattgtcgaggtagacattgatggacgcctgcatcgtatcagcatctatgac
ccactcaaaatcattactgaagatgagctaactgcccaggatatcaccgaatgcaatagt
aacaaggaaaacagtgaacagcctcagttccctggcaagtccaagaaaccctcatccaag
ggcaaaaagaaggaatcctgctccaagcatgcatctggtacttccttccacctcccacag
cccagcttccgtatggtggactcaggcatccagccagaagcacccccgctgcctgctgcc
tactaccgctacattgagaagccacctgaagacctggatgcagaggtagagtatgacatg
gatgaggaggaccttgcctggctggacatggtgaatgaaaaacggcgagtagatgggcac
agtttggtgtctgcagatacctttgagctgctggtagaccggcttgagaaagagtcatac
ttggagagtcgcagcagtggggcccaacagtcactcatcgatgaagacgctttctgctgt
gtgtgcctggatgatgaatgtcacaatagcaatgttattctcttctgtgacatctgcaac
ctggctgtacaccaggagtgctatggcgtcccatacatccctgagggccagtggctatgc
cgctgctgcctgcagtctccctcccggcctgtggattgcatcctttgccccaataagggt
ggcgccttcaaacagaccagtgatgggcactgggcccatgtggtgtgtgccatctggatc
cctgaagtctgctttgctaacaccgtgttcttggaacctattgagggcattgacaatatc
ccgcctgcccgctggaaactaacctgctatatctgcaagcagaaagggctaggtgcagcc
atccagtgccataaggtgaactgctacacagcattccatgtgacatgtgcacagcgggct
gggctcttcatgaagattgagcccatgcgcgaaaccagcctcaatggcaccatctttaca
gtgcgcaagactgcctactgtgaggcccactcgccaccaggtgcggccactgctaggagg
aagggcgactcccctagaagcatcagtgagactggcgatgaggaagggctgaaggagggt
gatggagaggaggaagaagaggaagaggtggaggaagaagagcaggaagctcaaggcggg
gtgagtggctccctcaagggagtgcccaagaaaagcaagatgagtttgaagcagaagatc
aagaaggagccagaggaagcaggccaagacacaccctccactctccccatgcttgctgtc
ccacagataccctcttacaggttgaacaagatctgtagtggtctctcctttcagaggaaa
aaccagtttatgcagcggcttcacaattattggctgttgaagcggcaggcacggaatggt
gtccctcttatccggcgcttgcactcccatctgcagtcccaaagaaacgctgagcagcga
gagcaggatgagaagacaagtgcagtgaaggaggagctgaagtattggcagaagctccgg
catgacttggagcgggcgcggctgctgattgagctgattcggaagagagagaagctcaaa
cgagagcaggtcaaagtccagcaggctgccatggagctggagctgatgccattcaatgtt
ctgttgaggacaacactggacctgctgcaggagaaggatcctgcacacatcttcgcagaa
ccagtcaacttgagtgaggcaagttccccctactttccaagtagtaaattcttcttgaac
tggaacagggttccagattacctggaattcatatccaagccaatggatttttctactatg
aggcggaagctggagtcccacctgtaccgcaccttggaggagtttgaggaggactttaac
cttatagttaccaactgcatgaagtataatgctaaagacacaattttccaccgagcagct
gtccgcctgcgggacctgggaggggccatcctacggcacgcccggcggcaggcagagaac
atcggctatgaccccgagaggggcactcacctgcccgagtcacccaaattggaagacttt
taccgcttctcctgggaagacgtggacaacatcctcatcccagagaaccgggcccatttg
tccccagaggtgcagctgaaggagctgctggagaaactggacctggtgagcgccatgcgg
tccagtggggcccgcacccgtcgtgtccgcctgctacgccgggagatcaatgcccttcgg
cagaagctggcacagccaccaccaccacagccaccatcactcaacaagacagtatccaat
ggggagctgccagcagggccccagggggatgcagctgtgctggagcaggccttgcaggag
gagccagaagacgatggggacagagatgactccaaactgcctcctccgccaaccctggag
cccactgggcctgcaccttccttgtctgagcaagaatcccccccggagccccctactctg
aaacccattaatgatagcaaacctccaagcaggttcctaaagcccagaaaggtggaagaa
gatgagctcttggaaaaatcaccactgcagctagggaatgagcctttgcaacgcttgctc
agtgacaatggcatcaacagactatccctcatggcccctgacaccccggccggtacccca
cttagtggtgtgggtcgccgcacatcagtcctcttcaagaaggccaagaatggggttaag
ctacagagaagcccagacagggtcctggagaatggcgaggaccatggtgtggcaggctct
cctgcctctccagccagcatcgaggaagagcgccactcccggaagcggccaaggagcagg
agctgtagtgagagcgaaggggagaggtccccccagcaggaggaagagacaggcatgacc
aacggctttggaaaacacaccgaaagcgggtctgactctgaatgtagtttgggtctcagt
ggtggactggcatttgaagcttgcagtggtctgacgccccccaaacgcagccgtgggaag
ccagccctgtctcgagtgcccttcctggaaggtgtgaacggagactctgactacaatggc
tcaggcagaagcctcctgctgccctttgaagaccgcggagacctggagcccttggagctg
gtgtgggccaagtgccgaggctacccctcctaccctgccttgatcatcgatcccaagatg
ccccgggagggcctcctgcacaatggcgttcccatccctgtccccccgctggacgtgctg
aagctgggagagcagaaacaggcagaggctggagagaagctcttccttgtcctcttcttt
gacaacaagcgcacctggcagtggcttccaagggacaaagtcctgcccttgggtgtggaa
gacaccgtggacaagctcaagatgctggaaggccgcaagaccagcatccgcaagtcagtg
caggtggcctatgaccgtgcgatgatccacctgagcagagtccgggggccccactccttc
gtcacttccagctacctggcacagagaagcctcttctgcccctgccagatgtatggccgg
cagcttccccctctcatggagcctctgctcctcattcagaaggagagtgaccctttggac
acacctgacttaccaagcttgctgaacttgagactcaaggatgctcacacctcttatgtc
actgctgctgttttaattctgtag