GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:58:51

Sequence gi568815578f:34458869_34659895 : 201027 bp : 44.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3225   3353  129  0  0   79   95    96 0.884   9.21
 1.02 Intr +  11180  11252   73  2  1   87   92    95 0.991   9.21
 1.03 Term +  13683  13778   96  2  0   48   53   120 0.959   2.47
 1.04 PlyA +  14237  14242    6                               1.05

 2.02 PlyA -  14466  14461    6                               1.05
 2.01 Sngl -  17606  17142  465  2  0   84   48   397 0.759  29.45
 2.00 Prom -  19134  19095   40                              -9.75

 3.00 Prom +  20622  20661   40                              -5.66
 3.01 Init +  20802  20921  120  2  0   22  115    61 0.787   2.39
 3.02 Intr +  21731  21864  134  1  2   87   97    60 0.994   6.24
 3.03 Intr +  22198  22338  141  1  0   52   94   106 0.876   7.07
 3.04 Intr +  30398  30518  121  2  1   42   80    54 0.200   0.50
 3.05 Intr +  30954  31058  105  2  0   63   72    44 0.564   0.71
 3.06 Intr +  33633  33729   97  2  1   32   71   112 0.839   3.48
 3.07 Intr +  45463  45535   73  2  1   73  119    34 0.901   3.46
 3.08 Intr +  48827  48922   96  2  0   58   -6   139 0.012   0.62
 3.09 Intr +  53281  53332   52  1  1   45   76    30 0.008  -3.59
 3.10 Intr +  57516  57593   78  2  0   57   89    92 0.025   5.95
 3.11 Intr +  67400  67475   76  1  1  103  107   113 0.995  13.79
 3.12 Intr +  75760  75927  168  2  0  117  110   268 0.995  31.82
 3.13 Intr +  79875  80113  239  1  2   64   40    57 0.105  -4.17
 3.14 Intr +  86059  86208  150  0  0   76   86   111 0.747  10.06
 3.15 Intr +  99473  99550   78  1  0   91   85    77 0.828   7.45
 3.16 Intr +  99827 100040  214  1  1   32   85    71 0.650  -0.51
 3.17 Intr + 100340 100395   56  0  2   86  117    95 0.886  10.90
 3.18 Intr + 100479 100585  107  2  2  112   90   255 0.622  27.11
 3.19 Term + 100868 101030  163  2  1   67   52   360 0.623  27.71
 3.20 PlyA + 101451 101456    6                               1.05

 4.14 PlyA - 101700 101695    6                               1.05
 4.13 Term - 102111 101998  114  0  0  126   47   194 0.999  17.67
 4.12 Intr - 105272 105246   27  2  0  100   75    24 0.407   0.61
 4.11 Intr - 107597 107487  111  2  0    9   54   121 0.108   1.38
 4.10 Intr - 116378 116236  143  0  2  108  110   138 0.997  18.07
 4.09 Intr - 122804 122680  125  1  2  113   76   180 0.990  19.53
 4.08 Intr - 126712 126569  144  0  0   84  106   113 0.964  12.10
 4.07 Intr - 129739 129585  155  1  2   96   92    46 0.458   4.67
 4.06 Intr - 157271 157174   98  0  2  103  115   -11 0.045   2.83
 4.05 Intr - 175847 175720  128  1  2   98   86   100 0.783  11.12
 4.04 Intr - 179117 179008  110  2  2  108   81   199 0.999  20.28
 4.03 Intr - 185358 185296   63  0  0   90  103    37 0.920   4.31
 4.02 Intr - 186466 186407   60  1  0  112  115   -26 0.696   1.43
 4.01 Init - 198568 198488   81  1  0   73   88    70 0.929   6.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  48827  48926  100  2  1   58   32   146 0.889   3.60
S.002 Init -  56825  56765   61  2  1   86   94    45 0.842   4.93
S.003 Init +  64716  64763   48  2  0   93   85     2 0.892   0.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:34458869_34659895|GENSCAN_predicted_peptide_1|99_aa
XQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKV
QYFRFWCQPDVEVIIFKHQWYCSNYSFKKYGIECKGKRG

>gi568815578f:34458869_34659895|GENSCAN_predicted_CDS_1|300_bp
nntcaattaaatgaaaagcccttacctgaaggttgggaaatgagattcacagtggatgga
attccatattttgtggaccacaatagaagaactaccacctatatagatccccgcacagga
aaatctgccctagacaatggacctcagatagcctatgttcgggacttcaaagcaaaggtt
cagtatttccggttctggtgtcagccagatgtggaagtgattattttcaagcaccagtgg
tattgtagcaactacagcttcaagaagtacggaattgaatgcaaagggaaaagaggttga

>gi568815578f:34458869_34659895|GENSCAN_predicted_peptide_2|154_aa
MAAAGGARLLRAASAVLGDPAGRWLHHAGSRAGASGLLRSRGPGRSAEASRPLSVSAGAR
SSSEDKVTVHFINCDGETLTTKGKVGDSLLDVVVENNPDIDGFGACEGTLACLTCHLIFE
DHIYEKLDAITDEENHMLDLAYGLTDHSWAAKSV

>gi568815578f:34458869_34659895|GENSCAN_predicted_CDS_2|465_bp
atggctgccgctgggggcgcccggctgctgcgcgccgcttctgcggtcctcggcgacccg
gccggccggtggctgcaccacgccgggtcccgcgctggagccagcggcctgctgaggagc
cggggaccgggccggagcgcggaggcgagccggccgctgagcgtgtcggcaggggcgcgg
agcagctcagaagataaagtgacagtccactttataaactgtgatggtgaaacattaaca
accaaaggaaaagttggtgattctctgctagacgttgtggttgaaaataatccagatatt
gatggctttggtgcatgtgagggaactctggcttgtttaacctgtcatctcatctttgaa
gatcacatatatgagaagttagatgcaatcactgatgaggagaatcacatgctcgatctg
gcatatggactaacagatcacagttgggctgccaaatctgtttga

>gi568815578f:34458869_34659895|GENSCAN_predicted_peptide_3|755_aa
MYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRI
LNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNI
LVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQE
IDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMG
SNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQDAETV
VMEACVIEIWPATKPLRRRRKAQDSLSVRYAGLPDRSEMAEVEETLKRLQSQKGVQGIIV
VNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAP
AHLRGKNQALGLALNSHKVTWLRSCHFAHAQQGAADQGSSEYGVKPRSLSPLHLWIYPGL
GKPFNSLRLRVLRVTRGFTELLYRPHSQQKCELAWDHLVSQSRLLLVLLLYVAIGPENMP
WGVSAETKMKPREGAGPLAPAVSHGAQNRVSPDTDSECCDLTSPGELPPAAAAAVLSASP
GALEREARSPRSPQTADTSPRPRAPACAPSRARAMPSDRPFKQRRSFADRCKEVQQIRDQ
HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQH
SMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF

>gi568815578f:34458869_34659895|GENSCAN_predicted_CDS_3|2268_bp
atgtattgcctgtttgaatatgcagggaaggataactactgcttgcagataaaccccgct
tcttacatcaatccagatcacctgaaatattttcgttttattggcagatttattgccatg
gctctgttccatgggaaattcatagacacgggtttttctttaccattctataagcgtatc
ttgaacaaaccagttggactcaaggatttagaatctattgatccagaattttacaattct
ctcatctgggttaaggaaaacaatattgaggaatgtgatttggaaatgtacttctccgtt
gacaaagaaattctaggtgaaattaagagtcatgatctgaaacctaatggtggcaatatt
cttgtaacagaagaaaataaagaggaatacatcagaatggtagctgagtggaggttgtct
cgaggtgttgaagaacagacacaagctttctttgaaggctttaatgaaattcttccccag
caatatttgcaatactttgatgcaaaggaattagaggtccttttatgtggaatgcaagag
attgatttgaatgactggcaaagacatgccatctaccgtcattatgcaaggaccagcaaa
caaatcatgtggttttggcagtttgttaaagaaattgataatgagaagagaatgagactt
ctgcagtttgttactggaacctgccgattgccagtaggaggatttgctgatctcatgggg
agcaatggaccacagaaattctgcattgaaaaagttgggaaagaaaattggctacccaga
agtcatacctgttttaatcgcctggacctgccaccatacaagagctatgagcaactgaag
gaaaagctgttgtttgccatagaagaaacagaaggatttggacaagatgctgaaacagtt
gttatggaggcctgcgttattgagatctggcctgccacgaaacctttgcgcaggcgcaga
aaggcacaggactcgctaagtgttcgctacgcggggctaccggatcggtcggaaatggca
gaggtggaggagacactgaagcgactgcagagccagaagggagtgcagggaatcatcgtc
gtgaacacagaaggcattcccatcaagagcaccatggacaaccccaccaccacccagtat
gccagcctcatgcacagcttcatcctgaaggcacggagcaccgtgcgtgacatcgacccc
cagaacgatctcaccttccttcgaattcgctccaagaaaaatgaaattatggttgcacca
gcccatcttcgtgggaagaaccaagctttaggcttggctctgaacagccacaaagtgact
tggctgaggtcctgccatttcgctcatgctcagcagggggcagcagaccagggcagttca
gagtatggggtcaaacccaggtccctgtccccactccacctgtggatttaccctggattg
ggcaagccctttaactctctgaggctccgtgttctcagagtgactcgaggattcactgag
ctcctttatagaccacattcccagcagaagtgtgagctcgcttgggaccacctggtgtca
cagtccaggctgctgctggtcctgctcctctacgtggcaatcggcccagagaatatgcct
tggggggtctcagcagaaactaagatgaagccccgtgaaggcgccgggcctttggctccg
gctgtttcccacggcgcccagaaccgcgtcagtcctgacacagactcggaatgttgtgac
ctgacgtcaccgggcgagttacctcccgcagccgcagccgccgtgctcagcgcgagcccc
ggagcccttgagcgcgaggcgcggagcccccggagcccccaaaccgcagacacatccccg
cgccccagagccccggcctgcgcgcccagccgggcccgcgcgatgccctcagaccggcct
ttcaagcagcggcggagcttcgccgaccgctgtaaggaggtacagcagatccgcgaccag
caccccagcaaaatcccggtgatcatcgagcgctacaagggtgagaagcagctgcccgtc
ctggacaagaccaagtttttggtcccggaccatgtcaacatgagcgagttggtcaagatc
atccggcgccgcctgcagctgaaccccacgcaggccttcttcctgctggtgaaccagcac
agcatggtgagtgtgtccacgcccatcgcggacatctacgagcaggagaaagacgaggac
ggcttcctctatatggtctacgcctcccaggaaaccttcggcttctga

>gi568815578f:34458869_34659895|GENSCAN_predicted_peptide_4|452_aa
MKKDAVHEREFPVIRNVQDLKPLAGDETPLIIYLFHFLIDYAELVFMITDALTAIALYFA
IQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRYIPLKVALFYLLNPYTILSCVAKS
TCAINNTLIAFFILTTIKGKALKGEYKGSAFLSAIFLALATYQSLYPLTLFVPGLLYLLQ
RQYIPVKMKSKAFWIFSWEYAMMYVGSLVVIICLSFFLLSSWDFIPAVYGFILSVPDLTP
NIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFIQIAVIAIFKSY
PTVGDVALYMAFFPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYA
ITLTFNVGQLPHELFIMVPEGGGPGALMAAIERNVDRAVPGGSAERDPIERSTLHILLIS
DYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK

>gi568815578f:34458869_34659895|GENSCAN_predicted_CDS_4|1359_bp
atgaaaaaggatgctgtccatgaaagagagtttcccgtcatcagaaatgttcaagactta
aagccacttgctggggatgagactccattaataatatacctctttcatttcctaattgac
tatgctgaattggtgtttatgataactgatgcactcactgctattgccctgtattttgca
atccaggacttcaataaagttgtgtttaaaaagcagaaactcctcctagaactggaccag
tatgccccagatgtggccgaactcatccggacccctatggaaatgcgttacatccctttg
aaagtggccctgttctatctcttaaatccttacacgattttgtcttgtgttgccaagtct
acctgtgccatcaacaacaccctcattgctttcttcattttgactacgataaaaggtaag
gccctgaaaggagagtacaaaggcagtgctttcctcagtgctatttttcttgccttagcg
acataccagtctctgtacccactcaccttgtttgtcccaggactcctctatctcctccag
cggcagtacatacctgtgaaaatgaagagcaaagccttctggatcttttcttgggagtat
gccatgatgtatgtgggaagcctagtggtaatcatttgcctctccttcttccttctcagc
tcttgggatttcatccccgcagtctatggctttatactttctgttccagatctcactcca
aacattggtcttttctggtacttctttgcagagatgtttgagcacttcagcctcttcttt
gtatgtgtgtttcagatcaacgtcttcttctacaccatccccttagccataaagctaaag
gagcaccccatcttcttcatgtttatccagatcgctgtcatcgccatctttaagtcctac
ccgacagtgggggacgtggcgctctacatggccttcttccccgtgtggaaccatctctac
agattcctgagaaacatctttgtcctcacctgcatcatcatcgtctgttccctgctcttc
cctgtcctgtggcacctctggatttatgcaggaagtgccaactctaatttcttttatgcc
atcacactgaccttcaacgttgggcagctgccccatgagctcttcatcatggtcccagag
ggaggcggccctggagccctcatggctgccatagagaggaatgtggaccgagccgtccct
gggggcagcgctgagagggaccccatcgagaggtccacattacatatcctgctcatctct
gattacttctatgccttcctgcggcgggagtactacctcacacatggcctctacttgacc
gccaaggatggcacagaggccatgctcgtgctcaagtag