Result of FASTA (omim) for pF1KB6473
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6473, 325 aa
  1>>>pF1KB6473 325 - 325 aa - 325 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0148+/-0.000486; mu= 9.3674+/- 0.030
 mean_var=237.5746+/-54.988, 0's: 0 Z-trim(115.9): 395  B-trim: 0 in 0/50
 Lambda= 0.083210
 statistics sampled from 26186 (26606) to 26186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.312), width:  16
 Scan time:  5.980

The best scores are:                                      opt bits E(85289)
NP_001180417 (OMIM: 602567) LIM and senescent cell ( 325) 2418 303.5   4e-82
NP_004978 (OMIM: 602567) LIM and senescent cell an ( 325) 2418 303.5   4e-82
NP_001180411 (OMIM: 602567) LIM and senescent cell ( 329) 2418 303.5   4e-82
NP_001180412 (OMIM: 602567) LIM and senescent cell ( 337) 2418 303.5 4.1e-82
NP_001180413 (OMIM: 602567) LIM and senescent cell ( 362) 2418 303.5 4.2e-82
NP_001180414 (OMIM: 602567) LIM and senescent cell ( 387) 2418 303.6 4.4e-82
XP_005264008 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2318 291.5 1.7e-78
XP_005264007 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2318 291.5 1.7e-78
XP_005264006 (OMIM: 602567) PREDICTED: LIM and sen ( 348) 2318 291.5 1.7e-78
XP_005264005 (OMIM: 602567) PREDICTED: LIM and sen ( 373) 2318 291.6 1.8e-78
XP_005264003 (OMIM: 602567) PREDICTED: LIM and sen ( 398) 2318 291.6 1.8e-78
NP_001154876 (OMIM: 607908,616827) LIM and senesce ( 336) 2152 271.6 1.7e-72
NP_001154875 (OMIM: 607908,616827) LIM and senesce ( 341) 2152 271.6 1.7e-72
NP_001129509 (OMIM: 607908,616827) LIM and senesce ( 363) 2152 271.6 1.7e-72
NP_060450 (OMIM: 607908,616827) LIM and senescent  ( 365) 2152 271.6 1.7e-72
XP_016859583 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859581 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859582 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859580 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_005263767 (OMIM: 607908,616827) PREDICTED: LIM  ( 272) 1755 223.8 3.3e-58
XP_006712690 (OMIM: 607908,616827) PREDICTED: LIM  ( 225) 1447 186.7 3.9e-47
NP_001243471 (OMIM: 607908,616827) LIM and senesce ( 189) 1201 157.1 2.8e-38
XP_011509755 (OMIM: 607908,616827) PREDICTED: LIM  ( 324) 1068 141.4 2.4e-33
XP_006712691 (OMIM: 607908,616827) PREDICTED: LIM  ( 190)  716 98.8 9.3e-21
XP_006718813 (OMIM: 605390) PREDICTED: leupaxin is ( 290)  514 74.8 2.4e-13
NP_001294880 (OMIM: 605390) leupaxin isoform 3 [Ho ( 366)  514 75.0 2.7e-13
XP_011543693 (OMIM: 605390) PREDICTED: leupaxin is ( 366)  514 75.0 2.7e-13
XP_011543690 (OMIM: 605390) PREDICTED: leupaxin is ( 366)  514 75.0 2.7e-13
XP_011543692 (OMIM: 605390) PREDICTED: leupaxin is ( 366)  514 75.0 2.7e-13
NP_004802 (OMIM: 605390) leupaxin isoform 2 [Homo  ( 386)  514 75.0 2.8e-13
NP_001137467 (OMIM: 605390) leupaxin isoform 1 [Ho ( 391)  514 75.0 2.8e-13
XP_016859958 (OMIM: 607908,616827) PREDICTED: LIM  ( 238)  500 73.0 6.8e-13
NP_001243354 (OMIM: 605904) PDZ and LIM domain pro ( 271)  462 68.6 1.7e-11
XP_011533001 (OMIM: 605903) PREDICTED: PDZ and LIM ( 309)  462 68.6 1.9e-11
XP_011533000 (OMIM: 605903) PREDICTED: PDZ and LIM ( 364)  462 68.7 2.1e-11
NP_976227 (OMIM: 605903) PDZ and LIM domain protei ( 423)  462 68.8 2.2e-11
NP_005442 (OMIM: 605903) PDZ and LIM domain protei ( 457)  462 68.9 2.3e-11
NP_001243357 (OMIM: 605904) PDZ and LIM domain pro ( 474)  462 68.9 2.4e-11
NP_001011513 (OMIM: 605904) PDZ and LIM domain pro ( 487)  462 68.9 2.4e-11
XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM ( 493)  462 68.9 2.4e-11
XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM ( 498)  462 68.9 2.5e-11
NP_006448 (OMIM: 605904) PDZ and LIM domain protei ( 596)  462 69.0 2.7e-11
XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM ( 600)  462 69.0 2.7e-11
XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM ( 602)  462 69.0 2.8e-11
XP_006714133 (OMIM: 605904) PREDICTED: PDZ and LIM ( 605)  462 69.0 2.8e-11
XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM ( 607)  462 69.0 2.8e-11
XP_005262753 (OMIM: 605904) PREDICTED: PDZ and LIM ( 619)  462 69.1 2.8e-11
NP_001243355 (OMIM: 605904) PDZ and LIM domain pro ( 625)  462 69.1 2.8e-11
XP_006714131 (OMIM: 605904) PREDICTED: PDZ and LIM ( 630)  462 69.1 2.8e-11
XP_005262752 (OMIM: 605904) PREDICTED: PDZ and LIM ( 728)  462 69.2 3.1e-11


>>NP_001180417 (OMIM: 602567) LIM and senescent cell ant  (325 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1595.4  bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)

               10        20        30        40        50        60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
              250       260       270       280       290       300

              310       320     
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::
NP_001 KKCYEKFPLELKKRLKKLAETLGRK
              310       320     

>>NP_004978 (OMIM: 602567) LIM and senescent cell antige  (325 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1595.4  bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)

               10        20        30        40        50        60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
              250       260       270       280       290       300

              310       320     
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::
NP_004 KKCYEKFPLELKKRLKKLAETLGRK
              310       320     

>>NP_001180411 (OMIM: 602567) LIM and senescent cell ant  (329 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1595.4  bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:5-329)

                   10        20        30        40        50      
pF1KB6     MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTCNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB6 KYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB6 LCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELK
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB6 GELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKG
              190       200       210       220       230       240

        240       250       260       270       280       290      
pF1KB6 LAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDM
              250       260       270       280       290       300

        300       310       320     
pF1KB6 KPVCKKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::::::
NP_001 KPVCKKCYEKFPLELKKRLKKLAETLGRK
              310       320         

>>NP_001180412 (OMIM: 602567) LIM and senescent cell ant  (337 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1595.3  bits: 303.5 E(85289): 4.1e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:13-337)

                           10        20        30        40        
pF1KB6             MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
                   ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGVAAGMTHSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KB6 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KB6 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
              130       140       150       160       170       180

      170       180       190       200       210       220        
pF1KB6 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
              190       200       210       220       230       240

      230       240       250       260       270       280        
pF1KB6 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
              250       260       270       280       290       300

      290       300       310       320     
pF1KB6 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::::::::::::::
NP_001 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
              310       320       330       

>>NP_001180413 (OMIM: 602567) LIM and senescent cell ant  (362 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1595.0  bits: 303.5 E(85289): 4.2e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:38-362)

                                             10        20        30
pF1KB6                               MANALASATCERCKGGFAPAEKIVNSNGEL
                                     ::::::::::::::::::::::::::::::
NP_001 ELSHSGLYRRRRDRPDSLRVNGLPEEELSNMANALASATCERCKGGFAPAEKIVNSNGEL
        10        20        30        40        50        60       

               40        50        60        70        80        90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
        70        80        90       100       110       120       

              100       110       120       130       140       150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
       130       140       150       160       170       180       

              160       170       180       190       200       210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
       190       200       210       220       230       240       

              220       230       240       250       260       270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
       250       260       270       280       290       300       

              280       290       300       310       320     
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
       310       320       330       340       350       360  

>>NP_001180414 (OMIM: 602567) LIM and senescent cell ant  (387 aa)
 initn: 2418 init1: 2418 opt: 2418  Z-score: 1594.6  bits: 303.6 E(85289): 4.4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:63-387)

                                             10        20        30
pF1KB6                               MANALASATCERCKGGFAPAEKIVNSNGEL
                                     ::::::::::::::::::::::::::::::
NP_001 EDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAEKIVNSNGEL
             40        50        60        70        80        90  

               40        50        60        70        80        90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
            100       110       120       130       140       150  

              100       110       120       130       140       150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
            160       170       180       190       200       210  

              160       170       180       190       200       210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
            220       230       240       250       260       270  

              220       230       240       250       260       270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
            280       290       300       310       320       330  

              280       290       300       310       320     
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
            340       350       360       370       380       

>>XP_005264008 (OMIM: 602567) PREDICTED: LIM and senesce  (336 aa)
 initn: 2758 init1: 2318 opt: 2318  Z-score: 1530.4  bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:1-317)

               10        20        30        40        50        60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
       ::::::::::::::::::::::::::::::::::::::::::::::::.::::.:.::::
XP_005 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVC
              250       260       270       280       290       300

              310       320                
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK           
       :.::::.: :.:.:: :                   
XP_005 KHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
              310       320       330      

>>XP_005264007 (OMIM: 602567) PREDICTED: LIM and senesce  (336 aa)
 initn: 2758 init1: 2318 opt: 2318  Z-score: 1530.4  bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:1-317)

               10        20        30        40        50        60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
       ::::::::::::::::::::::::::::::::::::::::::::::::.::::.:.::::
XP_005 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVC
              250       260       270       280       290       300

              310       320                
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK           
       :.::::.: :.:.:: :                   
XP_005 KHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
              310       320       330      

>>XP_005264006 (OMIM: 602567) PREDICTED: LIM and senesce  (348 aa)
 initn: 2758 init1: 2318 opt: 2318  Z-score: 1530.3  bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:13-329)

                           10        20        30        40        
pF1KB6             MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
                   ::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLGVAAGMTHSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KB6 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KB6 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
              130       140       150       160       170       180

      170       180       190       200       210       220        
pF1KB6 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
              190       200       210       220       230       240

      230       240       250       260       270       280        
pF1KB6 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
              250       260       270       280       290       300

      290       300       310       320                
pF1KB6 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK           
       .::::.:.:::::.::::.: :.:.:: :                   
XP_005 DKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
              310       320       330       340        

>>XP_005264005 (OMIM: 602567) PREDICTED: LIM and senesce  (373 aa)
 initn: 2758 init1: 2318 opt: 2318  Z-score: 1529.9  bits: 291.6 E(85289): 1.8e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:38-354)

                                             10        20        30
pF1KB6                               MANALASATCERCKGGFAPAEKIVNSNGEL
                                     ::::::::::::::::::::::::::::::
XP_005 ELSHSGLYRRRRDRPDSLRVNGLPEEELSNMANALASATCERCKGGFAPAEKIVNSNGEL
        10        20        30        40        50        60       

               40        50        60        70        80        90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
        70        80        90       100       110       120       

              100       110       120       130       140       150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
       130       140       150       160       170       180       

              160       170       180       190       200       210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
       190       200       210       220       230       240       

              220       230       240       250       260       270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
       250       260       270       280       290       300       

              280       290       300       310       320          
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK     
       ::::::::::::::::::.::::.:.:::::.::::.: :.:.:: :             
XP_005 WCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKK
       310       320       330       340       350       360       

XP_005 KKPVCL
       370   




325 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:06:01 2016 done: Fri Nov  4 23:06:02 2016
 Total Scan time:  5.980 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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