Result of FASTA (omim) for pF1KE0568
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0568, 288 aa
  1>>>pF1KE0568 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.2402+/-0.000811; mu= 6.1913+/- 0.051
 mean_var=432.2285+/-86.463, 0's: 0 Z-trim(115.0): 272  B-trim: 34 in 1/48
 Lambda= 0.061690
 statistics sampled from 24838 (25111) to 24838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.506), E-opt: 0.2 (0.294), width:  16
 Scan time:  4.180

The best scores are:                                      opt bits E(85289)
NP_001005922 (OMIM: 148022) keratin-associated pro ( 278) 1682 163.9 3.1e-40
NP_005544 (OMIM: 148021) keratin-associated protei ( 169)  953 98.7 8.2e-21
NP_000418 (OMIM: 152445,604117) loricrin [Homo sap ( 312)  550 63.2   7e-10
NP_061978 (OMIM: 600985,606408,615963) tenascin-X  (4242)  373 49.3 0.00015
NP_000217 (OMIM: 144200,607606) keratin, type I cy ( 623)  341 45.1  0.0004
NP_114163 (OMIM: 608822) keratin-associated protei ( 174)  329 43.2 0.00044
NP_000412 (OMIM: 113800,148080,607602,609165) kera ( 584)  335 44.5 0.00056
XP_005257400 (OMIM: 113800,148080,607602,609165) P ( 624)  335 44.6 0.00058
XP_011539189 (OMIM: 604266) PREDICTED: multiple ep (1395)  332 44.9   0.001
XP_006710469 (OMIM: 604266) PREDICTED: multiple ep (1436)  332 44.9  0.0011
XP_016878162 (OMIM: 612454) PREDICTED: multiple ep (1021)  326 44.1  0.0013
NP_115821 (OMIM: 612454) multiple epidermal growth (1044)  326 44.2  0.0013
XP_016878161 (OMIM: 612454) PREDICTED: multiple ep (1044)  326 44.2  0.0013
XP_016878160 (OMIM: 612454) PREDICTED: multiple ep (1092)  326 44.2  0.0013
XP_016878159 (OMIM: 612454) PREDICTED: multiple ep (1097)  326 44.2  0.0013
NP_112228 (OMIM: 608820) keratin-associated protei ( 167)  294 40.0  0.0037
XP_016865156 (OMIM: 610119) PREDICTED: teneurin-2  (2613)  312 43.6  0.0049
XP_006714960 (OMIM: 610119) PREDICTED: teneurin-2  (2758)  312 43.6  0.0051
NP_001116151 (OMIM: 610119) teneurin-2 isoform 1 [ (2765)  312 43.6  0.0051
XP_005266007 (OMIM: 610119) PREDICTED: teneurin-2  (2765)  312 43.6  0.0051
XP_011541996 (OMIM: 612453,614399) PREDICTED: mult (1140)  297 41.6  0.0082
NP_001243474 (OMIM: 612453,614399) multiple epider (1140)  297 41.6  0.0082
NP_115822 (OMIM: 612453,614399) multiple epidermal (1140)  297 41.6  0.0082
XP_016865476 (OMIM: 612453,614399) PREDICTED: mult (1195)  297 41.7  0.0084


>>NP_001005922 (OMIM: 148022) keratin-associated protein  (278 aa)
 initn: 2317 init1: 691 opt: 1682  Z-score: 843.3  bits: 163.9 E(85289): 3.1e-40
Smith-Waterman score: 1682; 71.5% identity (77.2% similar) in 298 aa overlap (1-288:1-278)

               10        20        30        40        50        60
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVC
       ::::::::::::.::::::::::::::::::::::::        :::::::.:::::::
NP_001 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGS-------GSSCCVPVCCCKPVC
               10        20        30               40        50   

               70        80        90       100       110       120
pF1KE0 CCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
       : ::.:::::::     ::: :: ::::::: :::: :::::::::::::::::::::::
NP_001 CRVPTCSCSSCG-----KGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGG
            60             70        80        90       100        

              130        140                150       160       170
pF1KE0 CGSCGGSKGGCVS-CGGSKGGCG---------SCGGSKGGCVSCGGSKGGCGSCGGSKGG
       ::::::::::: : :::  ..:           :     .: :::  :::::::: :::.
NP_001 CGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCG--KGGCGSCGCSKGA
      110       120       130       140       150         160      

              180       190       200       210       220       230
pF1KE0 CGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGC
       :::::::::::::::: :::::::: :. .: . :   .::::.:    ::   :: :.:
NP_001 CGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGC---GGCGSGCGVPVCC---CSCSSC
        170       180       190       200          210          220

              240       250       260       270       280        
pF1KE0 GSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
       ::   ... :   : : ::::::: ::::::::::::::.::::::::::::::::::
NP_001 GSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
              230       240       250       260       270        

>>NP_005544 (OMIM: 148021) keratin-associated protein 5-  (169 aa)
 initn: 1767 init1: 822 opt: 953  Z-score: 494.6  bits: 98.7 E(85289): 8.2e-21
Smith-Waterman score: 1012; 49.3% identity (52.8% similar) in 288 aa overlap (1-288:1-169)

               10        20        30        40        50        60
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVC
       ::::::::::::.:::: :.:              :.::::: ::: :::.:. ::::::
NP_005 MGCCGCSGGCGSSCGGCDSSC--------------GSCGSGCRGCGPSCCAPVYCCKPVC
               10        20                      30        40      

               70        80        90       100       110       120
pF1KE0 CCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
       ::::::::::::                                                
NP_005 CCVPACSCSSCG------------------------------------------------
         50                                                        

              130       140       150       160       170       180
pF1KE0 CGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
                                                                : :
NP_005 ---------------------------------------------------------KRG
                                                                60 

              190       200       210       220       230       240
pF1KE0 CGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCC
       ::::::::::::::::::::::::::::::::::::: ::::: ::. .: . ::.::  
NP_005 CGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGR
              70        80        90       100       110       120 

              250       260       270       280        
pF1KE0 KPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
          ::::::::::::::::::::::::::.:::::: :::::: ::::
NP_005 GSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI
             130       140       150       160         

>>NP_000418 (OMIM: 152445,604117) loricrin [Homo sapiens  (312 aa)
 initn: 392 init1: 392 opt: 550  Z-score: 298.3  bits: 63.2 E(85289): 7e-10
Smith-Waterman score: 559; 41.9% identity (56.1% similar) in 296 aa overlap (2-287:32-302)

                                            10        20        30 
pF1KE0                              MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGC
                                     : ::  :: ::: :. :::::  :.: :  
NP_000 SYQKKQPTPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGG-GYS
              10        20        30        40        50         60

              40        50        60        70        80        90 
pF1KE0 GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGC
       :.:::: .:: :: :.               . .:. .: ::   : :: .: :::  ::
NP_000 GGGCGGGSSGGGGGGG---------------IGGCGGGSGGSVKYSGGGGSSGGGS--GC
               70                       80        90       100     

             100         110       120       130         140       
pF1KE0 VSCGGSKGGCGSCGG--SKGGCGSCGGSKGGCGSCGGSKGGCVSCGGS--KGGCGSCGGS
        : ::. .:: : ::  :.:: ..: .: :: .: :::  :: : ::.  .:   .:  :
NP_000 FSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGS--GCFSSGGGGFSGQAVQCQ-S
           110       120       130       140         150        160

       150       160       170        180       190       200      
pF1KE0 KGGCVSCGGSKGGCGSCGGSKGGCGS-CGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCC
        :: :: :::.:: ..: .: :: :: :: : :: :  :::.:: ::   :. .  .  :
NP_000 YGG-VSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSC
               170       180       190       200       210         

           210       220       230       240       250       260   
pF1KE0 C---SSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCG--S
           : : :::   .:  . : ::.: :.:   :.:       .: :    ..: ::  :
NP_000 APQPSYGGGSSGGGGSGGSGCFSSGGGGGS---SGCGGGSSGIGSGCIISGGGSVCGGGS
     220       230       240          250       260       270      

             270       280                 
pF1KE0 SCCQSSCCNPCCSQSSCCVPVCCQCKI         
       :   ..  .   : :.  ::.: : .          
NP_000 SGGGGGGSSVGGSGSGKGVPICHQTQQKQAPTWPSK
        280       290       300       310  

>>NP_061978 (OMIM: 600985,606408,615963) tenascin-X isof  (4242 aa)
 initn:  98 init1:  80 opt: 373  Z-score: 202.9  bits: 49.3 E(85289): 0.00015
Smith-Waterman score: 391; 29.3% identity (44.9% similar) in 321 aa overlap (8-287:424-737)

                                      10          20           30  
pF1KE0                        MGCCGCSGGCGSGCGG--CGSGCGG---CGSGCGGCG
                                     :  :. ::.  :   : :   : .:   :.
NP_061 YSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCN
           400       410       420       430       440       450   

             40        50        60        70          80        90
pF1KE0 SGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGS--CGGSKGGYGSCGGSKGG
       .: .:   :  .: ..:     : .  : : :. .  .::.  : :.  : : :    : 
NP_061 AGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRC--VDGR
           460       470       480       490       500         510 

               100         110       120        130         140    
pF1KE0 CVSCGGSKG-GCGS--CGGSKGGCGSCGGSKGGCGSCGGSKG-GCV--SCGGSKGGCGSC
       ::   :  :  :::  : :.  : : :    : :   .: .:  :   :: :.  : :.:
NP_061 CVCNPGFTGEDCGSRRCPGDCRGHGLC--EDGVCVCDAGYSGEDCSTRSCPGGCRGRGQC
             520       530         540       550       560         

          150        160            170             180         190
pF1KE0 GGSKGGCVSCGGSKG-GCG--SCGGS---KGGC--GSC----GGSKGGCG--SCGGSKGG
           : ::   : .:  ::  .: ..   .: :  : :    :  .  :.  .: ..  :
NP_061 --LDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHG
       570       580       590       600       610       620       

              200           210             220        230         
pF1KE0 CGSCGCSQCSC----CKPCCCSSGCGSSC-----C-QSSC-CKPCCSSSGCGSSCCQSSC
        : :  ..: :      : : .  : ..:     : :. : :.   ..  ::.    .: 
NP_061 RGRCEEGRCLCDPGYTGPTCATRMCPADCRGRGRCVQGVCLCHVGYGGEDCGQEEPPASA
       630       640       650       660       670       680       

     240       250          260       270       280                
pF1KE0 CKPYCCQSSCCKP--C-CSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI        
       :   :     :.   : :  .  : .:  ..: . : ... :     : ::         
NP_061 CPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCRGRGECH-DGSCVCKDGYAGEDCG
       690       700       710       720       730        740      

NP_061 EEVPTIEGMRMHLLEETTVRTEWTPAPGPVDAYEIQFIPTTEGASPPFTARVPSSASAYD
        750       760       770       780       790       800      

>>NP_000217 (OMIM: 144200,607606) keratin, type I cytosk  (623 aa)
 initn: 684 init1: 261 opt: 341  Z-score: 195.1  bits: 45.1 E(85289): 0.0004
Smith-Waterman score: 362; 43.0% identity (57.0% similar) in 193 aa overlap (7-197:467-623)

                                       10         20         30    
pF1KE0                         MGCCGCSGGCGS-GCGGCGSGCGGCGSGC-GGCGSG
                                     :.: :. : :: :.. :. : :  :: :..
NP_000 YSLLLSIKMRLEKEIETYHNLLEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGS
        440       450       460       470       480       490      

           40        50        60        70        80        90    
pF1KE0 CGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSC
        :: ::: :  :.:                       :: ::: :.::. .:: ::    
NP_000 YGGGGSGGGYGGGS-----------------------GSRGGSGGSYGGGSGSGGGS---
        500       510                              520       530   

          100       110       120       130       140       150    
pF1KE0 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSC
       ::. :: :: :: .:: :  :: .:: :  :.  ::  : ::: :: :. .::.::    
NP_000 GGGYGG-GSGGGHSGGSG--GGHSGGSG--GNYGGGSGSGGGSGGGYGGGSGSRGGS---
               540         550         560       570       580     

          160       170       180       190       200       210    
pF1KE0 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS
       :::.:: .. :: .::  : ::.. . :: ::  :: :. . :                 
NP_000 GGSHGGGSGFGGESGG--SYGGGEEASGSGGGYGGGSGKSSHS                 
            590         600       610       620                    

          220       230       240       250       260       270    
pF1KE0 CCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS

>>NP_114163 (OMIM: 608822) keratin-associated protein 1-  (174 aa)
 initn: 386 init1: 238 opt: 329  Z-score: 194.4  bits: 43.2 E(85289): 0.00044
Smith-Waterman score: 349; 51.2% identity (61.6% similar) in 86 aa overlap (214-285:2-87)

           190       200       210       220         230       240 
pF1KE0 CGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCK-PCCSSSG-CGSSCCQSSCCK
                                     .:::.: :  :  : :: ::::::: :::.
NP_114                              MTCCQTSFCGYPSFSISGTCGSSCCQPSCCE
                                            10        20        30 

             250                   260       270       280         
pF1KE0 PYCCQSSCCKP--C----------CSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI 
         :::   :.   :          :::: :  :::..:::.: : ..::: : :::    
NP_114 TSCCQPRSCQTSFCGFPSFSTSGTCSSSCCQPSCCETSCCQPSCCETSCCQPSCCQISSC
              40        50        60        70        80        90 

NP_114 GTGCGIGGGISYGQEGSSGAVSTRIRWCRPDSRVEGTYLPPCCVVSCTPPSCCQLHHAQA
             100       110       120       130       140       150 

>>NP_000412 (OMIM: 113800,148080,607602,609165) keratin,  (584 aa)
 initn: 363 init1: 246 opt: 335  Z-score: 192.4  bits: 44.5 E(85289): 0.00056
Smith-Waterman score: 335; 53.5% identity (65.9% similar) in 129 aa overlap (72-197:457-577)

              50        60        70        80        90       100 
pF1KE0 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGC
                                     :: ::.  : :: ::. ::  : :::.:: 
NP_000 CQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGG
        430       440       450       460       470       480      

               110       120       130       140       150         
pF1KE0 --GSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKG
         :. :::.:: :  :::.:: :: ::. ::  : :: .:: .: ::  ::  : ::. :
NP_000 HGGGHGGSSGG-GYGGGSSGG-GSSGGGYGGGSSSGG-HGG-SSSGGYGGG--SSGGGGG
        490        500        510       520         530         540

     160       170       180       190        200       210        
pF1KE0 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC-GSCGCSQCSCCKPCCCSSGCGSSCCQS
       : :  :::.:: .: ::. :: .: :: :..  :: : :                     
NP_000 GYG--GGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRY              
                550       560       570       580                  

      220       230       240       250       260       270        
pF1KE0 SCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSC

>>XP_005257400 (OMIM: 113800,148080,607602,609165) PREDI  (624 aa)
 initn: 351 init1: 251 opt: 335  Z-score: 192.2  bits: 44.6 E(85289): 0.00058
Smith-Waterman score: 335; 53.5% identity (65.9% similar) in 129 aa overlap (72-197:457-577)

              50        60        70        80        90       100 
pF1KE0 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGC
                                     :: ::.  : :: ::. ::  : :::.:: 
XP_005 CQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGG
        430       440       450       460       470       480      

               110       120       130       140       150         
pF1KE0 --GSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKG
         :. :::.:: :  :::.:: :: ::. ::  : :: .:: .: ::  ::  : ::. :
XP_005 HGGGHGGSSGG-GYGGGSSGG-GSSGGGYGGGSSSGG-HGG-SSSGGYGGG--SSGGGGG
        490        500        510       520         530         540

     160       170       180       190        200       210        
pF1KE0 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC-GSCGCSQCSCCKPCCCSSGCGSSCCQS
       : :  :::.:: .: ::. :: .: :: :..  :: : :                     
XP_005 GYG--GGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRSAETSWDTNKTRVIK
                550       560       570       580       590        

      220       230       240       250       260       270        
pF1KE0 SCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSC
                                                                   
XP_005 TIIEEVAPDGRVLSSMVESETKKHYY                                  
      600       610       620                                      

>>XP_011539189 (OMIM: 604266) PREDICTED: multiple epider  (1395 aa)
 initn: 199 init1: 102 opt: 332  Z-score: 187.5  bits: 44.9 E(85289): 0.001
Smith-Waterman score: 384; 29.3% identity (47.8% similar) in 324 aa overlap (4-285:939-1248)

                                          10        20        30   
pF1KE0                            MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGS
                                     :  :::: .: : :    : :    :  :.
XP_011 DPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNG-GLCDPHTGRCLCPAGWTGD
      910       920       930       940        950       960       

             40           50           60        70              80
pF1KE0 GCGG-CGSGCGG--CGSSC-CVPICCCKPV---CCCVPACSCSSC------GSCGGSKGG
        : . :  :  :  :.. : : :   :. :   : : :. . :.:      :: : . . 
XP_011 KCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQACPPGSFGEDCAQ
       970       980       990      1000      1010      1020       

               90       100        110          120        130     
pF1KE0 YGSCGGSKGGCVSCGGSKGGCGSCGGSKG-GCGS-CG-GSKG-GCGS-CGGSKGGCVSCG
       . .: : .    .:  . : :.  .: .: .: . :  :  : :: . ::  .::  :: 
XP_011 MCQCPGENP---ACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGG--SCD
      1030         1040      1050      1060      1070        1080  

         140        150        160          170       180       190
pF1KE0 GSKGGCGSCGGSKG-GC-VSCGGSKGG--CGS-CGGSKGGCGSCGGSKGGCGSCGGSKGG
       .. :.:    :  :  : ..:  .. :  :   :: ..:.  .:    : :  :  ...:
XP_011 AATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGA--ACDPVTGTC-LCPPGRAG
           1090      1100      1110      1120        1130          

                    200       210         220               230    
pF1KE0 CGSC--GCSQ----CSCCKPCCCSSG--CGSSCCQSSC--------CKPCCSSSGCGSSC
          :  :: :     .: . : : .:  : .:  . ::        :.  :  .  :..:
XP_011 V-RCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGAAC
    1140       1150      1160      1170      1180      1190        

          240       250       260       270         280            
pF1KE0 CQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS--QSSCCVPVC-CQCKI   
        .  :    : ..: :.:  ..  :: .   ..: .::    ... :  .: ::      
XP_011 -HLECS---CHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCD
      1200         1210      1220      1230      1240      1250    

XP_011 PISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTGLCLCPPGRSGATC
         1260      1270      1280      1290      1300      1310    

>>XP_006710469 (OMIM: 604266) PREDICTED: multiple epider  (1436 aa)
 initn: 199 init1: 102 opt: 332  Z-score: 187.4  bits: 44.9 E(85289): 0.0011
Smith-Waterman score: 384; 29.3% identity (47.8% similar) in 324 aa overlap (4-285:980-1289)

                                          10        20        30   
pF1KE0                            MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGS
                                     :  :::: .: : :    : :    :  :.
XP_006 DPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNG-GLCDPHTGRCLCPAGWTGD
     950       960       970       980        990      1000        

             40           50           60        70              80
pF1KE0 GCGG-CGSGCGG--CGSSC-CVPICCCKPV---CCCVPACSCSSC------GSCGGSKGG
        : . :  :  :  :.. : : :   :. :   : : :. . :.:      :: : . . 
XP_006 KCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQACPPGSFGEDCAQ
     1010      1020      1030      1040      1050      1060        

               90       100        110          120        130     
pF1KE0 YGSCGGSKGGCVSCGGSKGGCGSCGGSKG-GCGS-CG-GSKG-GCGS-CGGSKGGCVSCG
       . .: : .    .:  . : :.  .: .: .: . :  :  : :: . ::  .::  :: 
XP_006 MCQCPGENP---ACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGG--SCD
     1070         1080      1090      1100      1110      1120     

         140        150        160          170       180       190
pF1KE0 GSKGGCGSCGGSKG-GC-VSCGGSKGG--CGS-CGGSKGGCGSCGGSKGGCGSCGGSKGG
       .. :.:    :  :  : ..:  .. :  :   :: ..:.  .:    : :  :  ...:
XP_006 AATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGA--ACDPVTGTC-LCPPGRAG
          1130      1140      1150      1160        1170       1180

                    200       210         220               230    
pF1KE0 CGSC--GCSQ----CSCCKPCCCSSG--CGSSCCQSSC--------CKPCCSSSGCGSSC
          :  :: :     .: . : : .:  : .:  . ::        :.  :  .  :..:
XP_006 V-RCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGAAC
              1190      1200      1210      1220      1230         

          240       250       260       270         280            
pF1KE0 CQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS--QSSCCVPVC-CQCKI   
        .  :    : ..: :.:  ..  :: .   ..: .::    ... :  .: ::      
XP_006 -HLECS---CHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCD
     1240         1250      1260      1270      1280      1290     

XP_006 PISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTGLCLCPPGRSGATC
        1300      1310      1320      1330      1340      1350     




288 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 22:54:16 2016 done: Wed Nov  2 22:54:17 2016
 Total Scan time:  4.180 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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