Result of FASTA (ccds) for pF1KE0230
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0230, 177 aa
  1>>>pF1KE0230 177 - 177 aa - 177 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.1936+/-0.00142; mu= 8.9175+/- 0.086
 mean_var=346.7105+/-66.571, 0's: 0 Z-trim(111.9): 118  B-trim: 24 in 1/50
 Lambda= 0.068880
 statistics sampled from 12656 (12770) to 12656 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.392), width:  16
 Scan time:  1.770

The best scores are:                                      opt bits E(32554)
CCDS31331.1 2 gene_id:440021|Hs108|chr11           ( 177) 1564 167.9 2.8e-42
CCDS41682.1 7 gene_id:440050|Hs108|chr11           ( 165) 1090 120.8 4.1e-28
CCDS41683.1 8 gene_id:57830|Hs108|chr11            ( 187) 1006 112.5 1.4e-25
CCDS41685.1 11 gene_id:440051|Hs108|chr11          ( 156)  986 110.4 5.2e-25
CCDS31332.1 6 gene_id:440023|Hs108|chr11           ( 129)  960 107.7 2.8e-24
CCDS41592.1 5 gene_id:439915|Hs108|chr11           ( 237)  913 103.5 9.7e-23
CCDS41684.1 10 gene_id:387273|Hs108|chr11          ( 202)  879 100.0 9.3e-22
CCDS31330.1 1 gene_id:387264|Hs108|chr11           ( 278)  850 97.3 8.1e-21
CCDS41591.1 3 gene_id:387266|Hs108|chr11           ( 238)  816 93.8 7.8e-20
CCDS53677.1 9 gene_id:3846|Hs108|chr11             ( 169)  724 84.4 3.7e-17
CCDS42331.1 3 gene_id:85290|Hs108|chr17            ( 195)  531 65.4 2.4e-11
CCDS54124.1 9 gene_id:100132386|Hs108|chr17        ( 210)  515 63.8 7.4e-11
CCDS45675.1 11 gene_id:653240|Hs108|chr17          ( 195)  514 63.7 7.6e-11


>>CCDS31331.1 2 gene_id:440021|Hs108|chr11                (177 aa)
 initn: 1564 init1: 1564 opt: 1564  Z-score: 872.5  bits: 167.9 E(32554): 2.8e-42
Smith-Waterman score: 1564; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
               70        80        90       100       110       120

              130       140       150       160       170       
pF1KE0 PCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI
              130       140       150       160       170       

>>CCDS41682.1 7 gene_id:440050|Hs108|chr11                (165 aa)
 initn: 1872 init1: 1043 opt: 1090  Z-score: 618.2  bits: 120.8 E(32554): 4.1e-28
Smith-Waterman score: 1187; 77.4% identity (80.1% similar) in 186 aa overlap (1-177:1-165)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       :::::::.:::::::::::.:::::::::::::              ::      : :::
CCDS41 MGCCGCSEGCGSGCGGCGSGCGGCGSGCGGCGS--------------SC------C-VPV
               10        20        30                              

               70        80        90       100       110       120
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
       :::::::  ::::::.::::::::::::::::::::::::::::::::::::::: :: :
CCDS41 CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCYK
      40        50        60        70        80        90         

              130       140       150                160       170 
pF1KE0 PCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCC---------QSSCCKPCCCQSNCCVPV
       :::::::::::::::::::::::::::: : ::         :::::.::: ::.:::::
CCDS41 PCCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPV
     100       110       120       130       140       150         

             
pF1KE0 CCQCKI
       ::::::
CCDS41 CCQCKI
     160     

>>CCDS41683.1 8 gene_id:57830|Hs108|chr11                 (187 aa)
 initn: 2190 init1: 953 opt: 1006  Z-score: 572.6  bits: 112.5 E(32554): 1.4e-25
Smith-Waterman score: 1050; 78.8% identity (82.7% similar) in 156 aa overlap (27-173:2-154)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
                                 :: ::.   ::::::::::.:.:::::: : ::.
CCDS41                          MGCCGCS---GGCGSGCGGCGSGCGGCGSSCCVPI
                                           10        20        30  

               70        80        90       100       110       120
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
       :::::::  ::::::.::::::::::: :::::::: :::::::::::::::::: :: :
CCDS41 CCCKPVCCCVPACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYK
             40        50        60        70        80        90  

              130       140       150                160       170 
pF1KE0 PCCCSSGCGSSCCQSSCCKPCCCQSSCCVPV---------CCQSSCCKPCCCQSNCCVPV
       :::::::::::::::::::::: ::::: :          ::::::::::: ::.:: : 
CCDS41 PCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQSSCCKPC
            100       110       120       130       140       150  

                                          
pF1KE0 CCQCKI                             
       ::                                 
CCDS41 CCSSGCGSSCCQSSCCKPCCSQSSCCVPICCQCKI
            160       170       180       

>>CCDS41685.1 11 gene_id:440051|Hs108|chr11               (156 aa)
 initn: 955 init1: 955 opt: 986  Z-score: 562.5  bits: 110.4 E(32554): 5.2e-25
Smith-Waterman score: 1050; 70.6% identity (73.8% similar) in 187 aa overlap (1-177:1-156)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       :::::::              ::::::::::::: ::::::::::.:::      : ::.
CCDS41 MGCCGCS--------------GGCGSGCGGCGSGSGGCGSGCGGCGSSC------C-VPI
                             10        20        30                

               70        80        90       100       110       120
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
       :::::::  ::::::.::::::::::::::::.:::::::          ::::::.:::
CCDS41 CCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGCGS----------CGCSQSNCCK
      40        50        60        70                  80         

              130       140            150            160       170
pF1KE0 PCCCSSGCGSSCCQSSCCKPCCCQSSCCV-----PVCCQSSCC-----KPCCCQSNCCVP
       ::: :::::: :::::: ::::::::::      : :::::::     :::::::.::::
CCDS41 PCCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQSSCCQSSCFKPCCCQSSCCVP
      90       100       110       120       130       140         

              
pF1KE0 VCCQCKI
       :::::::
CCDS41 VCCQCKI
     150      

>>CCDS31332.1 6 gene_id:440023|Hs108|chr11                (129 aa)
 initn: 948 init1: 948 opt: 960  Z-score: 549.3  bits: 107.7 E(32554): 2.8e-24
Smith-Waterman score: 960; 84.2% identity (88.7% similar) in 133 aa overlap (27-159:2-128)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
                                 :: ::.   ::::::::::.:.:::::: : ::.
CCDS31                          MGCCGCS---GGCGSGCGGCGSGCGGCGSSCCVPI
                                           10        20        30  

               70        80        90       100       110       120
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCK
       :::::::  ::::::::::::::::: :::::::::::::::::::::::::::: ::::
CCDS31 CCCKPVCCCVPACSCTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCK
             40        50        60        70        80        90  

              130       140       150       160       170       
pF1KE0 PCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI
       :: ::::::::::::::::::: :.:::::.:::   ::                  
CCDS31 PCYCSSGCGSSCCQSSCCKPCCSQASCCVPICCQ---CKI                 
            100       110       120                             

>>CCDS41592.1 5 gene_id:439915|Hs108|chr11                (237 aa)
 initn: 2514 init1: 780 opt: 913  Z-score: 521.7  bits: 103.5 E(32554): 9.7e-23
Smith-Waterman score: 1187; 67.0% identity (70.0% similar) in 230 aa overlap (6-177:10-237)

                   10           20        30        40         50  
pF1KE0     MGCCGCSRGCG---SGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCG-GCSSSCGGC
                :. :::   ::::::::.:::::::::::::: :::: ::: ::.. ::::
CCDS41 MGCCGCSGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCG-GCGSGCAG-CGGC
               10        20        30        40         50         

             60        70                                 80       
pF1KE0 GSRCYVPVCCCKPVCSWVPACSCTSCG-------------------------SCGGSKGG
       :: : ::::::::.:  ::::::.:::                         ::::::::
CCDS41 GSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSCGGSKGG
       60        70        80        90       100       110        

        90       100       110                 120       130       
pF1KE0 CGSCGGSKGGCGSCGGSKGGCGSCG----------CSQSSCCKPCCCSSGCGSSCCQSSC
       :::::::::::::::::::::::::          :::::::::::::::::::::::::
CCDS41 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSC
      120       130       140       150       160       170        

       140       150       160                          170       
pF1KE0 CKPCCCQSSCCVPVCCQSSCCKPC-------------------CCQSNCCVPVCCQCKI
       ::: ::::::: : ::::::::::                   ::::.:::::::::::
CCDS41 CKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGSSCCQSSCYKPCCCQSSCCVPVCCQCKI
      180       190       200       210       220       230       

>>CCDS41684.1 10 gene_id:387273|Hs108|chr11               (202 aa)
 initn: 2724 init1: 798 opt: 879  Z-score: 504.1  bits: 100.0 E(32554): 9.3e-22
Smith-Waterman score: 1142; 68.1% identity (70.5% similar) in 210 aa overlap (1-170:1-195)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       ::::::: :::::::::::.:::::::::: :::              :::::: : :::
CCDS41 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGYGSG--------------CGGCGSSCCVPV
               10        20        30                      40      

               70        80                                        
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKG----------------------------------
       :::::::  ::::::.::::::::::                                  
CCDS41 CCCKPVCCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGS
         50        60        70        80        90       100      

               90       100       110       120       130       140
pF1KE0 ------GCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKP
             ::::::::::::::::::::::::::::: .::::::::::::: :::::::.:
CCDS41 CGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGS-CCQSSCCNP
        110       120       130       140       150        160     

              150       160       170       
pF1KE0 CCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI
       :::::::::::::::::::::::::.::::       
CCDS41 CCCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQCKI
         170       180       190       200  

>>CCDS31330.1 1 gene_id:387264|Hs108|chr11                (278 aa)
 initn: 1474 init1: 457 opt: 850  Z-score: 487.3  bits: 97.3 E(32554): 8.1e-21
Smith-Waterman score: 902; 64.1% identity (72.8% similar) in 184 aa overlap (1-175:1-170)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       :::::::       :::::::::::::::::::: ::::::::: .:::  :     :::
CCDS31 MGCCGCS-------GGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSC--C-----VPV
                      10        20        30        40             

               70             80        90       100       110     
pF1KE0 CCCKPVCSWVPACSCTSCG-----SCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQ
       :::::::  ::.:::.:::     : :::::::::::: :::::::::::::::::: :.
CCDS31 CCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSK
         50        60        70        80        90       100      

         120       130         140         150       160       170 
pF1KE0 SSCCKPCCCSSGCGSSC--CQSSCCKP-CCCQS-SCCVPVCCQSSCCKPCCCQSNCCVPV
       ..: .    ..::::.:  : :::: : :::.   ::::.:  ::: :  : . .:   .
CCDS31 GGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGA
        110       120       130       140       150       160      

                                                                   
pF1KE0 CCQCKI                                                      
       : .:                                                        
CCDS31 CGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGS
        170       180       190       200       210       220      

>--
 initn: 746 init1: 365 opt: 569  Z-score: 336.3  bits: 69.4 E(32554): 2.1e-12
Smith-Waterman score: 692; 61.1% identity (69.1% similar) in 149 aa overlap (11-159:171-277)

                                   10        20        30        40
pF1KE0                     MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGS
                                     :.. ::::: :::: .:::.::...:::::
CCDS31 CCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGS-CGGCKGGCGSCGGSKGGCGS
              150       160       170        180       190         

               50        60        70        80        90       100
pF1KE0 GCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGS
       :::::.:.::       ::::::          ::.:::::.::::::::          
CCDS31 GCGGCGSGCG-------VPVCCC----------SCSSCGSCAGSKGGCGS----------
     200              210                 220       230            

              110       120       130       140       150       160
pF1KE0 CGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKP
                  .::: :::::::::::::::::::::::::: :::::::::::   :: 
CCDS31 -----------SCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQ---CKI
                       240       250       260       270           

              170       
pF1KE0 CCCQSNCCVPVCCQCKI

>>CCDS41591.1 3 gene_id:387266|Hs108|chr11                (238 aa)
 initn: 2845 init1: 686 opt: 816  Z-score: 469.6  bits: 93.8 E(32554): 7.8e-20
Smith-Waterman score: 994; 63.5% identity (65.4% similar) in 208 aa overlap (1-174:1-186)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       ::: :::       ::::::::::::.::::::: :::::::      :        :::
CCDS41 MGCSGCS-------GGCGSSCGGCGSSCGGCGSGYGGCGSGC------C--------VPV
                      10        20        30                       

               70        80        90       100       110          
pF1KE0 CCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGS----------
       :::::::  ::::::.:::::::::: :::::: ::::::::::::::::          
CCDS41 CCCKPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSS
      40        50        60        70        80        90         

                                      120       130       140      
pF1KE0 ------------------------CGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSS
                               ::::: :: ::::::::::::::::::::: : :::
CCDS41 SCGSCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSCSQSS
     100       110       120       130       140       150         

        150       160       170                                    
pF1KE0 CCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI                             
       :: : : ::::::::::.:.:    :::                                
CCDS41 CCKPCCSQSSCCKPCCCSSGCG-SSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSC
     160       170       180        190       200       210        

>>CCDS53677.1 9 gene_id:3846|Hs108|chr11                  (169 aa)
 initn: 2062 init1: 475 opt: 724  Z-score: 421.5  bits: 84.4 E(32554): 3.7e-17
Smith-Waterman score: 899; 62.8% identity (68.6% similar) in 191 aa overlap (1-177:1-169)

               10        20        30        40        50        60
pF1KE0 MGCCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPV
       ::::::: ::::.:::: ::::.::::: :::               ::      : .::
CCDS53 MGCCGCSGGCGSSCGGCDSSCGSCGSGCRGCGP--------------SC------C-APV
               10        20        30                              

               70             80        90              100        
pF1KE0 CCCKPVCSWVPACSCTSCG-----SCGGSKGGCGSCGGSKGGC-------GSCGGSKGGC
        ::::::  ::::::.:::     ::::::::::::: :. .:       ..::.:   :
CCDS53 YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQC
      40        50        60        70        80        90         

      110         120       130       140       150       160      
pF1KE0 GSCG--CSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSN
       . :   ::: ::::::: ::: :::::::::::::: .:: :   ::::::::::: :: 
CCDS53 SCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCC-SSSGCGSSCCQSSCCKPCCSQSR
     100       110       120       130        140       150        

        170       
pF1KE0 CCVPVCCQCKI
       :::::: ::::
CCDS53 CCVPVCYQCKI
      160         




177 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 20:22:22 2016 done: Thu Nov  3 20:22:23 2016
 Total Scan time:  1.770 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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