GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:46:03

Sequence gi568815596f:181357655_181635524 : 277870 bp : 36.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  17074  17261  188  2  2   30   47   161 0.169   2.87
 1.02 PlyA +  19524  19529    6                               1.05

 2.05 PlyA -  19949  19944    6                               1.05
 2.04 Term -  21183  21062  122  1  2   78   28    87 0.052  -0.64
 2.03 Intr -  53933  53795  139  2  1   40   82   183 0.746  12.02
 2.02 Intr -  60267  60178   90  0  0   66   86    53 0.684   2.17
 2.01 Init -  64734  64549  186  0  0   94   52   106 0.857   6.70
 2.00 Prom -  91566  91527   40                              -3.65

 3.02 PlyA -  91850  91845    6                              -0.45
 3.01 Sngl -  93838  91898 1941  1  0   70   47   564 0.922  44.14
 3.00 Prom -  97115  97076   40                              -4.15

 4.00 Prom +  98735  98774   40                              -5.95
 4.01 Init + 100001 100197  197  1  2   55  101   269 0.813  21.35
 4.02 Intr + 100589 100663   75  2  0   39   92   118 0.434   5.01
 4.03 Intr + 109889 109954   66  2  0  103  108    37 0.773   4.30
 4.04 Intr + 114347 114399   53  2  2   56   83    50 0.472  -1.07
 4.05 Intr + 117306 117412  107  1  2   66   66    84 0.542   3.01
 4.06 Intr + 117505 117634  130  0  1   56  116    41 0.816   3.05
 4.07 Intr + 123944 124029   86  0  2  102  116   146 0.999  17.42
 4.08 Intr + 124706 124768   63  1  0   94   85    33 0.747   1.60
 4.09 Intr + 124860 124997  138  2  0   39   88   169 0.945  11.74
 4.10 Intr + 128227 128338  112  0  1  118   86   135 0.999  15.33
 4.11 Intr + 135671 135765   95  0  2   14  110    92 0.953   2.76
 4.12 Intr + 137068 137158   91  0  1   94   95   121 0.997  12.05
 4.13 Intr + 137717 137762   46  0  1  116  116    77 0.999   9.85
 4.14 Intr + 138129 138283  155  0  2  100   60    82 0.902   5.39
 4.15 Intr + 140969 141123  155  0  2   67   62    77 0.641   1.87
 4.16 Intr + 143857 143949   93  0  0   18   95    95 0.583   2.44
 4.17 Intr + 152004 152153  150  2  0   71   11   172 0.603   7.24
 4.18 Intr + 154045 154121   77  0  2   83  100    29 0.231   0.99
 4.19 Intr + 164537 164687  151  2  1   36  119   127 0.253   9.84
 4.20 Intr + 165783 165878   96  2  0   77  110    19 0.796   2.29
 4.21 Intr + 166517 166596   80  1  2  100   35    54 0.798  -1.27
 4.22 Intr + 167548 167637   90  1  0   47  106    84 0.761   4.29
 4.23 Intr + 169643 169733   91  2  1   91   66    78 0.989   4.98
 4.24 Intr + 171887 171994  108  1  0   88   98    69 0.992   7.46
 4.25 Intr + 172870 172995  126  0  0   92  111   100 0.998  12.66
 4.26 Intr + 174003 174122  120  2  0   50  115    47 0.814   3.37
 4.27 Intr + 176618 176716   99  1  0   77   66    79 0.694   3.99
 4.28 Term + 177778 177873   96  0  0   78   49    41 0.522  -3.81
 4.29 PlyA + 177950 177955    6                              -0.45

 5.07 PlyA - 178134 178129    6                               1.05
 5.06 Term - 179982 179976    7  2  1  108   49     0 0.202  -5.54
 5.05 Intr - 181610 181438  173  2  2   60   97   144 0.498  10.32
 5.04 Intr - 187142 187046   97  1  1   37   80    57 0.480  -1.11
 5.03 Intr - 190950 190891   60  2  0   86  100    42 0.626   2.13
 5.02 Intr - 191203 191026  178  2  1   47   97   182 0.730  13.06
 5.01 Init - 194230 194191   40  1  1   94   69    26 0.566   1.70
 5.00 Prom - 199074 199035   40                              -4.75

 6.04 PlyA - 200193 200188    6                               1.05
 6.03 Term - 201054 200880  175  2  1   80   46   142 0.645   5.45
 6.02 Intr - 219493 219343  151  2  1   -2   91   110 0.006   0.60
 6.01 Intr - 246425 246183  243  0  0   84  111    77 0.062   6.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 239734 239937  204  0  0   79   46   158 0.863   7.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_1|62_aa
XAVCEKQGSGQPRETINPTFTGKADNEQSVACYFTADTSSHKKEKKGEDDINCESFTDVC
SS

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_1|189_bp
ntggctgtttgtgaaaagcagggcagtggtcaaccaagggagacgataaacccaaccttt
accggcaaagctgataatgaacagtcagttgcatgctatttcacagctgatacctcttcc
cacaaaaaggaaaaaaagggggaagatgatattaattgtgaaagtttcacagatgtctgc
agcagttga

>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_2|178_aa
MGLGIYLDQYTRQKGQDPVAELKQLIPLVVSLSAPNLEMPLLKKKTTNPSTFLKSLSGGL
NLKTECSRVVDAIHVSQTPGSWSQMKKEGKQKAQGDLNSVPETLAEVIGDPAGNPPPAEE
GWVRVRPEEALWLQTATAGWQHELSWAPWSSAQPSAEAVNSAITTAESDHSPDEITLI

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_2|537_bp
atggggcttggaatctatttagatcaatacacaaggcagaaaggacaagacccagttgct
gaactgaaacaactgattccattggtagtctctctatcagcaccaaacctggaaatgcca
ctcctcaagaaaaagaccaccaatccaagcacctttctaaaatcacttagtggaggcctg
aatcttaagacagaatgcagtagagtcgtcgacgccatccatgttagtcaaacccctggg
tcatggagccagatgaagaaggagggcaaacagaaggcccagggagacctgaattctgtc
cctgagactctggctgaagttattggagatcctgcagggaatcctcccccagctgaagaa
ggatgggtcagggttagacctgaagaggcactctggttgcagactgccacagccggatgg
cagcatgaactcagctgggccccgtggtcctcagcccagccctcggcagaagcagtgaat
tcagccataactacagcagagtctgatcattctcctgatgaaattacactgatctaa

>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_3|646_aa
MDKFLDTYTLPMLNQEEVESLNRSITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKPFQSIEKEGILPNSFYEASIILIPKAERDTTKKENFRPISLMNINAKILSKILE
NRIQQHIKKLIHHDQVDFIPGMQGWFNIRKSINVIQHINTTKDKNHMIISIDAEKVFDKI
QQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTSTRQGCPLSPLLF
NIVLKVLARAIRQKKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQYLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LNKIKEDTNKWKNIPCSWIGRTDTVKMAILPKVIYRSNAMLIKLPRTFFTELEKTTLKFI
WNQKRACIAKSILSQKNKAGGIMLPHFKLYYKVTVTKTARYWYQNRDIDQWNRTEPSEII
PHIYNHLIFGKPDKNKKWGKDFLFNKWCWENWLAICRKLKLDPFLTPYTKINSRCIKDLH
VRPKTIKTLEENLGNTIQDIGMGKDFISKTPKAMATKAKIDKWDLIKLKSFCTAKETTIR
VNRQPTEWEKIFAIYSSDKGLISRIYKELKQIYKKKTTPSTSGQRI

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_3|1941_bp
atggataaattcctggacacatacaccctcccaatgctaaaccaggaagaagttgaatcc
ctgaatagatcaataacaggctctgaaattgaggcaataattaatagcctaccaaccaaa
aaaagtccaggaccagacggattcacagccgaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaaccattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaaggctgagagagacacaacaaaaaaagag
aattttagaccaatatccctgatgaacatcaatgcaaaaatcctcagtaaaatactggaa
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtggacttcatccct
gggatgcaaggctggttcaacatacgcaaatcaataaatgtaatccagcatataaacaca
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggtctttgacaaaatt
cagcagcccttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaa
ataataagagctatttatgacaaacccacagccaatatcatcctgaatgggcaaaaattg
gaagcattccctttgaaaactagcacaagacagggatgccctctctcaccactcctattc
aacatagtgttgaaagttctggccagggcaatcaggcagaagaaagaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatcta
gaaaaccccattgtctcagcccaatatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaacaaaataaaagaggacacaaacaaatggaagaacattccatgctcatggatagga
agaaccgataccgtgaaaatggccatactgcccaaggtaatttatagatccaatgccatg
ctcatcaagctaccaaggactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcctgcattgccaagtcaatcctaagccaaaagaacaaagccgga
ggcatcatgctacctcacttcaaactatactacaaggttacagtaaccaaaacagcacgg
tactggtaccaaaacagagatatagaccaatggaacagaacagagccctcagaaataata
ccacacatctacaaccatctgatctttggcaaacctgacaaaaacaagaaatggggaaag
gatttcctatttaataaatggtgctgggaaaactggctggccatatgtagaaagctaaaa
ctggatcccttccttacaccttatacaaaaattaattcaagatgcattaaagacttacat
gttagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacata
ggcatgggcaaggacttcatttctaaaacaccaaaagcaatggcaacaaaagccaaaatt
gataaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcaga
gtgaacaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaaggg
ctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaccccatca
acaagtgggcaaaggatatga

>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_4|981_aa
MAWEARREPGPRRAAVRETVMLLLCLGVPTGRPYNVDTESALLYQGPHNTLFGYSVVLHS
HGANRCDQSRGDLQMQDRKESRPDVRTAPAGGNAKILRTILNGGKEQGKIGNKELRGTHV
ERKKFQGSDVSSPNGEPCGKTCLEERDNQWLGVTLSRQPGENGSIVTCGHRWKNIFYIKN
ENKLPTGGCYGVPPDLRTELSKRIAPCYQGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAY
IFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVY
INSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYI
YNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLR
TRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNMSLD
VNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRSRRSRFDTWRRGYCGNT
GERMVPTKVVAVDMKDVRDILTPIQIEAAYHLGPHVISKRSTEEFPPLQPILQQKKEKDI
MKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAY
ETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLD
VSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGS
NDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSFSPQTDKLFNILDVQTTTGE
CHFENYQRVCALEQQKSAMQTLKGIVRFLSKTDKRLLYCIKADPHCLNFLCNFGKMESGK
EASVHIQLEGRPSILEMDETSALKFEIRATGFPEPNPRVIELNKDENVAHAGFFKRQYKS
ILQEENRRDSWSYINSKSNDD

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_4|2946_bp
atggcttgggaagcgaggcgcgaacccggcccccgaagggccgccgtccgggagacggtg
atgctgttgctgtgcctgggggtcccgaccggccgcccctacaacgtggacactgagagc
gcgctgctttaccagggcccccacaacacgctgttcggctactcggtcgtgctgcacagc
cacggggcgaaccgatgtgatcaatcccggggcgatttacagatgcaggatcggaaagaa
tcccggccagacgtgcgaacagctccagctggtggaaatgccaaaatactgagaaccatt
ctaaatggaggaaaagagcagggcaagatagggaacaaagagctgagaggcactcatgtg
gagagaaagaagtttcagggaagtgatgttagtagccctaatggagaaccttgtggaaag
acttgtttggaagagagagacaatcagtggttgggggtcacactttccagacagccagga
gaaaatggatccatcgtgacttgtgggcatagatggaaaaatatattttacataaagaat
gaaaataagctccccactggtggttgctatggagtgccccctgatttacgaacagaactg
agtaaaagaatagctccgtgttatcaaggatattcagtcggagctggtcattttcggagc
cagcatactaccgaagtagtcggaggagctcctcaacatgagcagattggtaaggcatat
atattcagcattgatgaaaaagaactaaatatcttacatgaaatgaaaggtaaaaagctt
ggatcgtactttggagcttctgtctgtgctgtggacctcaatgcagatggcttctcagat
ctgctcgtgggagcacccatgcagagcaccatcagagaggaaggaagagtgtttgtgtac
atcaactctggctcgggagcagtaatgaatgcaatggaaacaaacctcgttggaagtgac
aaatatgctgcaagatttggggaatctatagttaatcttggcgacattgacaatgatggc
tttgaagatgttgctatcggagctccacaagaagatgacttgcaaggtgctatttatatt
tacaatggccgtgcagatgggatctcgtcaaccttctcacagagaattgaaggacttcag
atcagcaaatcgttaagtatgtttggacagtctatatcaggacaaattgatgcagataat
aatggctatgtagatgtagcagttggtgcttttcggtctgattctgctgtcttgctaagg
acaagacctgtagtaattgttgacgcttctttaagccaccctgagtcagtaaatagaacg
aaatttgactgtgttgaaaatggatggccttctgtgtgcatagatctaacactttgtttc
tcatataagggcaaggaagttccaggttacattgttttgttttataacatgagtttggat
gtgaacagaaaggcagagtctccaccaagattctatttctcttctaatggaacttctgac
gtgattacaggaagcatacaggtgtccagcagagaagctaactgtagaacacatcaagca
tttatgcggagtaggagatcaagattcgacacatggagaagaggctactgtggcaacaca
ggtgagaggatggttccaacaaaagtggtggcagtggatatgaaagatgtgcgggacatc
ctcaccccaattcagattgaagctgcttaccaccttggtcctcatgtcatcagtaaacga
agtacagaggaattcccaccacttcagccaattcttcagcagaagaaagaaaaagacata
atgaaaaaaacaataaactttgcaaggttttgtgcccatgaaaattgttctgctgattta
caggtttctgcaaagattgggtttttgaagccccatgaaaataaaacatatcttgctgtt
gggagtatgaagacattgatgttgaatgtgtccttgtttaatgctggagatgatgcatat
gaaacgactctacatgtcaaactacccgtgggtctttatttcattaagattttagagctg
gaagagaagcaaataaactgtgaagtcacagataactctggcgtggtacaacttgactgc
agtattggctatatatatgtagatcatctctcaaggatagatattagctttctcctggat
gtgagctcactcagcagagcggaagaggacctcagtatcacagtgcatgctacctgtgaa
aatgaagaggaaatggacaatctaaagcacagcagagtgactgtagcaatacctttaaaa
tatgaggttaagctgactgttcatgggtttgtaaacccaacttcatttgtgtatggatca
aatgatgaaaatgagcctgaaacgtgcatggtggagaaaatgaacttaactttccatgtt
atcaacactggcaatagtatggctcccaatgttagtgtggaaataatggtaccaaattct
tttagcccccaaactgataagctgttcaacattttggatgtccagactactactggagaa
tgccactttgaaaattatcaaagagtgtgtgcattagagcagcaaaagagtgcaatgcag
accttgaaaggcatagtccggttcttgtccaagactgataagaggctattgtactgcata
aaagctgatccacattgtttaaatttcttgtgtaattttgggaaaatggaaagtggaaaa
gaagccagtgttcatatccaactggaaggccggccatccattttagaaatggatgagact
tcagcactcaagtttgaaataagagcaacaggttttccagagccaaatccaagagtaatt
gaactaaacaaggatgagaatgttgcgcatgctggcttctttaaaagacaatacaaatct
atcctacaagaagaaaacagaagagacagttggagttatatcaacagtaaaagcaatgat
gattaa

>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_5|184_aa
MMPQLENSTPHVTGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQR
RDFAVVKALAKLKAEDCEISFLPFNSSDDVQERLNNGSMALIIARNTSRPEFIKHLKRYA
SVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEV
HIRI

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_5|555_bp
atgatgccacaactggaaaattccacacctcatgtgacagggcatgtacagctggtcgac
gtctgcaccttcagcaccgctggcaagcttcttcgctttgggttctcagccatgtttggc
tttggtggaagaactttggctctggcagaaaaatatcgatggatgtcccctaaccaacgg
agagattttgctgttgttaaggcactggcaaaacttaaggcagaagactgtgaaatatca
tttttaccatttaacagctctgatgatgtgcaagaaagattaaataatggaagtatggct
cttataattgcccgaaacacttctcggccagaatttataaaacacctgaaaagatatgcc
agtgtaaaaaatcagttcaattttccatttgttgagacttacactgttgaggaagtaaaa
gttcatccaaggaataatactggtggatataatccagaggaggaggaggatgaaactgct
tcagaaaattgtttcccttggaatgtagatggtgacttaatggaagttgcatcagaggtc
catattaggatttga

>gi568815596f:181357655_181635524|GENSCAN_predicted_peptide_6|189_aa
XDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGITLFICLKKEQNKLKNSTLD
LINLSEDHCDIWFRQFKKILAECWFSKCGPFADIVSTWEPVINMNLQTTPQTTKPKILGA
GAQNLCFKKHVSVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG
KGVATDSLN

>gi568815596f:181357655_181635524|GENSCAN_predicted_CDS_6|570_bp
ngtgattctaagtatgacttgctatgtaaagaagaatttattgaactcaaagacatattc
tctgtgaaactgaaacggcgttgttctgttaaacagcagagaagtggtactttattaggt
atcacactcttcatctgcttgaaaaaggaacaaaataaactaaagaattctacacttgat
cttattaatttaagtgaagaccactgtgacatatggtttagacagttcaagaaaatattg
gcagaatgttggttctcaaaatgtggcccctttgcagacatcgtcagcacctgggaacct
gttataaatatgaatctgcagaccacaccccagactactaagcccaaaattctgggggct
ggagcccagaatctatgttttaagaagcacgtcagtgttgtctgtgttggtggagatgga
tctgctagcgaagtagcccatgctttgcttctgagagctcagaagaatgctgggatggaa
acagaccgaatcctgactcctgtcagagcacagcttccacttggcttaataccagcaggc
aagggagtggctacagattcattaaactga