GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:35:49

Sequence gi568815594r:184288761_184529064 : 240304 bp : 43.84% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1101   1096    6                               1.05
 1.04 Term -  10925  10369  557  0  2   78   48   657 0.869  55.19
 1.03 Intr -  21817  21725   93  2  0   76   70    33 0.230   0.24
 1.02 Intr -  24817  24601  217  1  1   83   53    32 0.215  -2.72
 1.01 Init -  27530  27300  231  2  0   62   47   325 0.769  24.06
 1.00 Prom -  45265  45226   40                              -5.16

 2.07 PlyA -  45551  45546    6                               1.05
 2.06 Term -  53293  53115  179  2  2   67   44   139 0.895   5.25
 2.05 Intr -  55278  55071  208  0  1  109   42    75 0.366   3.65
 2.04 Intr -  56008  55891  118  0  1  111  -16    60 0.339  -1.63
 2.03 Intr -  56335  56302   34  2  1   77   80    32 0.555  -1.42
 2.02 Intr -  56980  56891   90  2  0   37   71   118 0.703   4.97
 2.01 Init -  59424  59331   94  0  1   28   94    99 0.720   3.05
 2.00 Prom -  86721  86682   40                              -3.36

 3.22 PlyA -  88404  88399    6                               1.05
 3.21 Term - 100306  99998  309  1  0    1   46   419 0.937  24.06
 3.20 Intr - 101989 101943   47  2  2   86   99    50 0.959   4.03
 3.19 Intr - 103132 103082   51  2  0   93  100     4 0.312   0.98
 3.18 Intr - 110319 110155  165  1  0   49  115   256 0.720  24.33
 3.17 Intr - 119515 119398  118  1  1   98   65    57 0.570   4.44
 3.16 Intr - 129453 129407   47  1  2   78   84    56 0.373   2.33
 3.15 Intr - 129948 129772  177  1  0   94   98   146 0.966  16.09
 3.14 Intr - 130808 130709  100  2  1  130   79   -14 0.729   1.58
 3.13 Intr - 132333 132235   99  0  0  110   19    46 0.382   0.21
 3.12 Intr - 140310 140218   93  0  0  110  113    75 0.459  12.36
 3.11 Intr - 152949 152906   44  1  2   51  119    75 0.009   4.86
 3.10 Intr - 153271 153241   31  1  1   91   48    15 0.001  -4.50
 3.09 Intr - 158395 158261  135  1  0   98   72     7 0.009   0.86
 3.08 Intr - 159988 159880  109  0  1   34   78    69 0.018   0.79
 3.07 Intr - 167323 167207  117  0  0   74  110   105 0.323  10.88
 3.06 Intr - 171619 171500  120  0  0   64  103    24 0.125   1.11
 3.05 Intr - 186484 186393   92  1  2  100   82    65 0.067   5.89
 3.04 Intr - 212304 212197  108  0  0  100   53    23 0.039   0.48
 3.03 Intr - 216176 216114   63  2  0   68  111   112 0.852  10.41
 3.02 Intr - 220782 220736   47  1  2   64   83    60 0.539   1.23
 3.01 Init - 225227 225131   97  2  1   59   36    92 0.448   1.57
 3.00 Prom - 234820 234781   40                              -0.86

 4.03 PlyA - 234938 234933    6                               1.05
 4.02 Term - 235722 235313  410  1  2   47   48   145 0.730   1.78
 4.01 Init - 236446 236281  166  1  1   70   72    63 0.304   2.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:184288761_184529064|GENSCAN_predicted_peptide_1|365_aa
MNKKKEKKKKEKEKEKEGKGKGKEKEKEGKGKGKGKEMEKGRRKRKKKRKRKRRKRNKKE
KKKKKEEEEEEEEIWTQNCCCKLVVLRNDEKPVVFPKFQESEADSRRVKMVWAQKWSCGT
SSEEICCPLKGQNRSWCVGSSRITHKGFTRRSQPLNEEQDSVTREAEVCPGRNNSLHDPE
RWFRFWYLVPELSNHHVEQKGKTTKKRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDG
FISKEDLHGMLASLGKNPTDACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAF
ACFDEEATGTIQEDYLRELLTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHGV
KDKDD

>gi568815594r:184288761_184529064|GENSCAN_predicted_CDS_1|1098_bp
atgaacaagaagaaggagaagaagaagaaggagaaggagaaggagaaggaggggaagggg
aaggggaaggagaaggagaaggaggggaaggggaaggggaaagggaaggaaatggagaaa
ggaagaagaaaaaggaagaagaagaggaagaggaaaaggaggaagagaaacaagaaggag
aagaagaagaagaaggaggaggaggaggaggaggaggaaatttggacacagaactgctgc
tgcaaactagtagttttgagaaatgatgaaaaacctgtggttttccccaaattccaagaa
tcagaggcagattctaggagggtgaagatggtgtgggctcaaaaatggtcatgcggcaca
tcttctgaggagatatgctgcccattaaaagggcaaaacaggagttggtgtgtgggcagt
tcccgcatcacacataaaggcttcaccagaaggtcacagcccctgaatgaggagcaggac
agtgtaaccagggaggcagaggtgtgcccaggacgtaacaattcactgcatgaccctgag
aggtggttccgtttctggtatttggtgccggaattaagcaaccaccatgttgagcaaaaa
ggcaagaccaccaagaagcgccctcagtgtgcaacgtccaaggtgtttgccacgtttgac
cagtcacagattcaggagttcaaagaggccttcaacatgattgatcagaacagagatggt
ttcatcagcaaggaagatttgcatggtatgcttgcttctctagggaagaatcccactgat
gcatgccttgatgccgtgatgaatgaggcaccagggcccattaacttcaccatgttgctc
gccatgtttggtaagaagttaaatggcacagatcctgaagacgtcatcagaaatgctttt
gcttgctttgatgaagaagcaacaggcaccattcaggaagattacctgagagagctgctg
acaaccgtgggggatcagtttacggatgaggaagtggatgagctgtacacagaagcacct
attgacaaaaaggggaatttcaattacatcgaattcacaagcatcctgaaacatggagta
aaagacaaagatgactga

>gi568815594r:184288761_184529064|GENSCAN_predicted_peptide_2|240_aa
MHFLLLRGPESLPLAALGPRCVQTLPDTPLSALFLTFNAYISTPKIDQEAADATERSGFG
IRGAYQALGDSARAVLGESSMISAHEGTIRLNKPKRKSKNNLMFSVLRSKEEELEACKLH
FPESPASLLPSSLCQWETLVGAWKEGRREKEADFISPSVEVSGSGSSSSSGSSCGNSSSS
GSPESSRSHLHWRMRRHMKKKEDATDSSAVPPSRDVSVTVFDLLAQLLSLNAMHEQARQN

>gi568815594r:184288761_184529064|GENSCAN_predicted_CDS_2|723_bp
atgcacttcctcttgctgagggggcccgaaagcctcccgctggctgctctgggtcccagg
tgcgtccagacgttgccagacacacctctgtcagccctcttcctgaccttcaatgcttac
atctccactcccaaaatagatcaggaagctgctgatgccacagaaagatctggctttgga
ataagaggggcctaccaggcactgggcgactcagccagggctgttcttggagagagcagc
atgatttcagcccatgaaggaacaatcaggctcaataaacctaagagaaaatcgaagaat
aatctaatgttctcagtgctcaggtctaaagaggaagagctggaagcctgcaaactacat
ttcccagaatccccagccagcttgcttcccagtagcctctgccaatgggagacactggtg
ggagcttggaaggagggtagaagggagaaagaagctgattttatttctccttctgttgaa
gtctctggcagtggcagcagtagcagcagtggcagcagctgcggcaatagcagtagcagc
ggcagccctgaaagcagcagatctcacctgcattggaggatgagacgccacatgaagaag
aaagaagacgccacagacagcagcgcagtaccaccttccagagatgtgagtgtgaccgtc
tttgaccttctagcccagctgctttccctgaatgcaatgcatgagcaggccaggcaaaac
tag

>gi568815594r:184288761_184529064|GENSCAN_predicted_peptide_3|722_aa
MSDVTGKKLRDVRDVKKRREEKRSSVRLEQPFIALKGPGYLEGAAEDGASGFEDARGVAL
EGYVERMGLPFKNVKIILGSEAVQKQGVGWLLPVGCRVETSMLSTLLNGAERQVVSEGAA
APPMVAPSATDKVPIRTFSVSGSESLYPLNNNCFPQPLAASILLSVCESDHSRCLMAGTH
SGVLFLAGFESHLRDTTSCLKACFNTDVPTFVFAGELVVEGPLEDKHLQFANLSVTQRWH
FWRFFFHLNFELWSQPFLQGALIPFGGGWCLETKICALPVLIAVGVLLFPGPFSVKAPSA
DARSDGAIVNTLMVEDIDNILGTMPVERMRMRPWLEEQINSNTIPGLKWLNKHLVQGSAY
LAITRTALRALKEYNLLGFNLHRIQEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK
HQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKK
PKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHLD
SNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYADGGSALILQRRKL
QLSKESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPD
LQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVK
SC

>gi568815594r:184288761_184529064|GENSCAN_predicted_CDS_3|2169_bp
atgagtgatgtcactggaaagaagctcagagatgtcagagatgtaaagaagagaagagaa
gagaagagaagtagtgtcagactggagcaaccattcatagccttgaagggacctggatac
ctggaaggggctgccgaggatggagcctccggctttgaagatgctcggggagttgctttg
gagggctacgtggagagaatgggattgccatttaaaaatgtaaaaatcattcttggttca
gaggctgtacaaaaacagggagtaggctggcttttgcctgtgggctgtcgtgtggagacc
tctatgctaagcacactcctaaatggagcggagcgccaggtggtgtcagagggggcggcg
gcccctccaatggtggcaccctcagccacggataaggttccaattagaactttttcagta
tctggatcagaatctctatacccattaaacaataactgcttcccgcagcccctggcagcc
agcattctactttctgtctgtgaatctgaccactcgagatgtctcatggcaggcacccac
tccggtgtgctcttcctggcaggcttcgagtctcacctccgggacaccacgtcttgcttg
aaagcttgctttaacactgacgtgcccaccttcgtctttgcaggagaactggtggtggag
gggcctctggaggacaaacatctacaatttgcaaatctatcagtgacccagcgatggcac
ttctggcggtttttcttccaccttaactttgagctctggagtcagccatttctccaagga
gccctgattccttttggtggaggatggtgtttggaaaccaagatttgtgcactgcctgtg
ctcattgctgttggggtcttgctgttcccaggcccttttagtgtcaaggctcccagtgca
gatgccaggtcagacggagctattgttaataccctcatggtggaggatattgacaacatc
ctgggcaccatgccggtggaaaggatgcgcatgcgcccgtggctggaggagcagataaac
tccaacacgatcccggggctcaagtggcttaacaagcatctagtgcagggatccgcatac
ctagcaattaccagaactgccttgagagctttgaaagagtacaacctcctgggctttaat
ctccacagaatccaggaaaagaagatttttcagatcccctggatgcatgcggctagacat
gggtgggatgtggaaaaagatgcaccactctttagaaactgggcaatccatacaggaaag
catcaaccaggagtagataaacctgatcccaaaacatggaaggcgaatttcagatgcgcc
atgaattccttgcctgatattgaagaagtcaaggataaaagcataaagaaaggaaataat
gccttcagggtctaccgaatgctgcccctatcagaacggccttctaagaaaggaaagaaa
ccaaagacagaaaaagaagacaaagttaagcacatcaagcaagaaccagttgagtcatct
ctggggcttagtaatggagtaagtgatctttctcctgagtatgcggtcctgacttcaact
ataaaaaatgaagtggatagtacggtgaacatcatagttgtaggacagtcccatctggac
agcaacattgagaatcaagagattgtcaccaatccgccagacatttgccaagttgtagag
gtgaccactgagagcgacgagcagccggtcagcatgagcgagctctaccctctgcagatc
tcccccgtgtcttcctatgcagatggtggcagtgccctcattttacagaggagaaaactg
cagctcagtaaagaaagcgaaacgactgatagtgtgcccagcgatgaagagagtgccgag
gggcggccacactggcggaagaggaatattgaaggcaaacagtacctcagcaacatgggg
actcgaggctcctacctgctgcccggcatggcgtccttcgtcacttccaacaaaccggac
ctccaggtcaccatcaaagaggagagcaatccggtgccttacaacagctcctggccccct
tttcaagacctccccctttcttcctccatgaccccagcatccagcagcagtcggccagac
cgggagacccgggccagcgtcatcaagaaaacatcggatatcacccaggcccgcgtcaag
agctgttaa

>gi568815594r:184288761_184529064|GENSCAN_predicted_peptide_4|191_aa
MDQFLDTYTRSRLNQEEIESPNSPITSSEIEAVINSLPTKKSLGPDRFTAENSPRVLEVL
DKAFRQEKEVKHIQIGREEVKLSLFADDKIVYLENPFVSAQNLLKLIRNFSKLSGYKIYV
QKSLAFLYANNRKAERQTVNELPFTIATKRIKYLGIQLTREVKDLFKESYKPLLKEIRED
TNKWKKFHAHG

>gi568815594r:184288761_184529064|GENSCAN_predicted_CDS_4|576_bp
atggatcaattcctggacacatacacccgctcaagactcaaccaggaagaaattgaatcc
ccgaatagtccaataacaagttctgaaattgaggcagtaataaatagcctaccaaccaag
aaaagcctaggaccagacagattcacagctgagaattctcccagagtattggaagttctg
gataaggcattcaggcaagagaaagaagtaaaacatattcaaataggaagagaggaagtc
aaactatctctgtttgcagatgacaagattgtgtatttagaaaacccctttgtctcagcc
caaaaccttcttaagctgatacgcaacttcagcaaactctcaggatacaaaatctatgtg
caaaaatcactagcattcctatacgccaacaacaggaaagcagagaggcaaaccgtgaat
gaactcccattcacaattgccacaaaaagaataaaatacctaggaatacagctaacaagg
gaagtgaaggacctcttcaaggagagctataaaccactgctcaaagaaatcagagaggac
acaaacaaatggaaaaaattccatgctcatggataa