Result of FASTA (omim) for pF1KB6480
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6480, 337 aa
  1>>>pF1KB6480 337 - 337 aa - 337 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9871+/-0.000317; mu= 18.5391+/- 0.020
 mean_var=69.5590+/-14.151, 0's: 0 Z-trim(116.9): 36  B-trim: 160 in 1/55
 Lambda= 0.153779
 statistics sampled from 28338 (28374) to 28338 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.333), width:  16
 Scan time:  8.360

The best scores are:                                      opt bits E(85289)
NP_005525 (OMIM: 147569,614889) interferon gamma r ( 337) 2277 513.8  2e-145
NP_001316057 (OMIM: 147569,614889) interferon gamm ( 356) 2130 481.2 1.4e-135
XP_011527856 (OMIM: 147569,614889) PREDICTED: inte ( 339) 2118 478.6 8.5e-135
XP_011527855 (OMIM: 147569,614889) PREDICTED: inte ( 362) 2114 477.7 1.7e-134
NP_000619 (OMIM: 123889,610424,612567) interleukin ( 325)  306 76.5 8.5e-14
XP_005261021 (OMIM: 107450) PREDICTED: interferon  ( 488)  232 60.3   1e-08
NP_000620 (OMIM: 107450) interferon alpha/beta rec ( 557)  232 60.3 1.1e-08
NP_653318 (OMIM: 605621) interleukin-20 receptor s ( 311)  191 51.0 3.9e-06
XP_011527854 (OMIM: 107450) PREDICTED: interferon  ( 270)  189 50.5 4.8e-06
XP_016862121 (OMIM: 605621) PREDICTED: interleukin ( 264)  186 49.8 7.5e-06
XP_011511213 (OMIM: 605621) PREDICTED: interleukin ( 264)  186 49.8 7.5e-06
XP_006713728 (OMIM: 605621) PREDICTED: interleukin ( 264)  186 49.8 7.5e-06
XP_011511212 (OMIM: 605621) PREDICTED: interleukin ( 316)  176 47.7   4e-05


>>NP_005525 (OMIM: 147569,614889) interferon gamma recep  (337 aa)
 initn: 2277 init1: 2277 opt: 2277  Z-score: 2731.7  bits: 513.8 E(85289): 2e-145
Smith-Waterman score: 2277; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)

               10        20        30        40        50        60
pF1KB6 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMAD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQ
              250       260       270       280       290       300

              310       320       330       
pF1KB6 PILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
       :::::::::::::::::::::::::::::::::::::
NP_005 PILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
              310       320       330       

>>NP_001316057 (OMIM: 147569,614889) interferon gamma re  (356 aa)
 initn: 2130 init1: 2130 opt: 2130  Z-score: 2555.1  bits: 481.2 E(85289): 1.4e-135
Smith-Waterman score: 2229; 94.7% identity (94.7% similar) in 356 aa overlap (1-337:1-356)

               10        20                           30        40 
pF1KB6 MRPTLLWSLLLLLGVFAAAAAAPP-------------------DPLSQLPAPQHPKIRLY
       ::::::::::::::::::::::::                   :::::::::::::::::
NP_001 MRPTLLWSLLLLLGVFAAAAAAPPAQLTLETYQEWCNDSAATHDPLSQLPAPQHPKIRLY
               10        20        30        40        50        60

              50        60        70        80        90       100 
pF1KB6 NAEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NAEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASP
               70        80        90       100       110       120

             110       120       130       140       150       160 
pF1KB6 SAGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSS
              130       140       150       160       170       180

             170       180       190       200       210       220 
pF1KB6 PFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKS
              190       200       210       220       230       240

             230       240       250       260       270       280 
pF1KB6 NIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWF
              250       260       270       280       290       300

             290       300       310       320       330       
pF1KB6 HTPPSIPLQIEEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTPPSIPLQIEEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
              310       320       330       340       350      

>>XP_011527856 (OMIM: 147569,614889) PREDICTED: interfer  (339 aa)
 initn: 2118 init1: 2118 opt: 2118  Z-score: 2541.0  bits: 478.6 E(85289): 8.5e-135
Smith-Waterman score: 2118; 98.7% identity (99.4% similar) in 317 aa overlap (21-337:23-339)

                 10        20        30        40        50        
pF1KB6   MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNST
                             .:  .:::::::::::::::::::::::::::::::::
XP_011 MSTPSSSESVNLGMCCLTYKRDSADVNPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNST
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 RPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAE
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 LGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVH
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 YWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETM
              190       200       210       220       230       240

      240       250       260       270       280       290        
pF1KB6 ADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDP
              250       260       270       280       290       300

      300       310       320       330       
pF1KB6 TQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
       :::::::::::::::::::::::::::::::::::::::
XP_011 TQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
              310       320       330         

>>XP_011527855 (OMIM: 147569,614889) PREDICTED: interfer  (362 aa)
 initn: 2114 init1: 2114 opt: 2114  Z-score: 2535.8  bits: 477.7 E(85289): 1.7e-134
Smith-Waterman score: 2114; 100.0% identity (100.0% similar) in 312 aa overlap (26-337:51-362)

                    10        20        30        40        50     
pF1KB6      MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALS
                                     ::::::::::::::::::::::::::::::
XP_011 MVPKDVHALILRVREPGNVLPDVQKGLRRYPLSQLPAPQHPKIRLYNAEQVLSWEPVALS
               30        40        50        60        70        80

          60        70        80        90       100       110     
pF1KB6 NSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRL
               90       100       110       120       130       140

         120       130       140       150       160       170     
pF1KB6 RAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCY
              150       160       170       180       190       200

         180       190       200       210       220       230     
pF1KB6 YVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCY
              210       220       230       240       250       260

         240       250       260       270       280       290     
pF1KB6 ETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYL
              270       280       290       300       310       320

         300       310       320       330       
pF1KB6 KDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
       ::::::::::::::::::::::::::::::::::::::::::
XP_011 KDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
              330       340       350       360  

>>NP_000619 (OMIM: 123889,610424,612567) interleukin-10   (325 aa)
 initn: 158 init1:  73 opt: 306  Z-score: 368.7  bits: 76.5 E(85289): 8.5e-14
Smith-Waterman score: 335; 25.7% identity (56.0% similar) in 327 aa overlap (5-324:1-299)

               10        20        30        40        50        60
pF1KB6 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
           . :::   ::    ..:     :...: :.. ..   : ...:.::  :.....  
NP_000     MAWSLGSWLGGCLLVSA-----LGMVPPPENVRMNSVNFKNILQWESPAFAKGN--
                   10             20        30        40           

               70        80        90       100       110       120
pF1KB6 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
       ... .:  : . . :         .: . : :::::.. :  .        :::.:::..
NP_000 LTFTAQ--YLSYRIFQD-------KCMNTTLTECDFSSLSKYGDH------TLRVRAEFA
      50          60               70        80              90    

              130       140       150       160            170     
pF1KB6 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP-----FDIADTSTAF--F
         :: ::..  :    .. .::: ...:     :: .:: .:     ..    ....  .
NP_000 DEHSDWVNIT-FCPVDDTIIGPP-GMQVEVLADSLHMRFLAPKIENEYETWTMKNVYNSW
          100        110        120       130       140       150  

           180       190       200       210       220       230   
pF1KB6 CYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNIS
        : :.::..:  .. .   . .   : ::.:  .::.::.. .: ...   ..:. :.  
NP_000 TYNVQYWKNGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRG-FLPDRN---KAGEWSEPV
            160       170       180       190           200        

           240       250       260       270       280       290   
pF1KB6 CYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEE
       : .:  : ..   .: .: ...  .. .   .:: :.       :: :    :.: ...:
NP_000 CEQTTHDETVPSWMVAVILMASVFMVCLALLGCFALLWCVYKKTKYAFSPRNSLPQHLKE
      210       220       230       240       250       260        

           300       310       320       330                    
pF1KB6 YLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL             
       .:  : .  :  ..   : ..::.:..:.:.                          
NP_000 FLGHPHHNTLLFFSFPLSDENDVFDKLSVIAEDSESGKQNPGDSCSLGTPPGQGPQS
      270       280       290       300       310       320     

>>XP_005261021 (OMIM: 107450) PREDICTED: interferon alph  (488 aa)
 initn: 178 init1:  81 opt: 232  Z-score: 277.5  bits: 60.3 E(85289): 1e-08
Smith-Waterman score: 232; 22.3% identity (52.1% similar) in 328 aa overlap (13-332:143-452)

                                 10        20        30        40  
pF1KB6                   MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYN
                                     .::.. .        ..:: :.. .. . :
XP_005 NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN
            120       130       140       150       160       170  

             50        60        70        80        90       100  
pF1KB6 AEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPS
        . ::.:.  . .: :  : .   :   .         .:  .: .. .:.: :    :.
XP_005 QNYVLKWD-YTYANMTFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVF----PQ
            180        190       200       210        220          

            110       120       130       140       150       160  
pF1KB6 AGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP
         :   . . ::..:  :   : :     :.   .. . ::  ...     :. : ...:
XP_005 NVFQKGIYL-LRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAP
        230        240       250       260        270       280    

            170          180       190       200       210         
pF1KB6 FDIADTSTAF---FCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL--
        . ..: .     . : . .::. .  . :   ....... ::::  :::....:. .  
XP_005 KQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDE
          290       300       310       320       330       340    

        220       230       240       250       260       270      
pF1KB6 -WNKSNIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGL
         :::..:     :.  : .:    ....  .. : .. :.:  :. .:  ::       
XP_005 KLNKSSVF-----SDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----
          350            360       370       380       390         

        280       290        300       310       320        330    
pF1KB6 IKYWFHTPPSIPLQIEEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVL
       :.: :    .   .:.::... : . .: . ....  :  . ...: : .  : .: :  
XP_005 INYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDED
          400       410       420       430       440       450    

                                         
pF1KB6 QTL                               
                                         
XP_005 HKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV
          460       470       480        

>>NP_000620 (OMIM: 107450) interferon alpha/beta recepto  (557 aa)
 initn: 157 init1:  81 opt: 232  Z-score: 276.7  bits: 60.3 E(85289): 1.1e-08
Smith-Waterman score: 232; 22.3% identity (52.1% similar) in 328 aa overlap (13-332:212-521)

                                 10        20        30        40  
pF1KB6                   MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYN
                                     .::.. .        ..:: :.. .. . :
NP_000 NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN
             190       200       210       220       230       240 

             50        60        70        80        90       100  
pF1KB6 AEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPS
        . ::.:.  . .: :  : .   :   .         .:  .: .. .:.: :    :.
NP_000 QNYVLKWD-YTYANMTFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVF----PQ
              250       260       270       280        290         

            110       120       130       140       150       160  
pF1KB6 AGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP
         :   . . ::..:  :   : :     :.   .. . ::  ...     :. : ...:
NP_000 NVFQKGIYL-LRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAP
         300        310       320       330        340       350   

            170          180       190       200       210         
pF1KB6 FDIADTSTAF---FCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL--
        . ..: .     . : . .::. .  . :   ....... ::::  :::....:. .  
NP_000 KQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDE
           360       370       380       390       400       410   

        220       230       240       250       260       270      
pF1KB6 -WNKSNIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGL
         :::..:     :.  : .:    ....  .. : .. :.:  :. .:  ::       
NP_000 KLNKSSVF-----SDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----
           420            430       440       450       460        

        280       290        300       310       320        330    
pF1KB6 IKYWFHTPPSIPLQIEEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVL
       :.: :    .   .:.::... : . .: . ....  :  . ...: : .  : .: :  
NP_000 INYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDED
           470       480       490       500       510       520   

                                         
pF1KB6 QTL                               
                                         
NP_000 HKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV
           530       540       550       

>--
 initn: 122 init1:  62 opt: 192  Z-score: 228.8  bits: 51.4 E(85289): 5.3e-06
Smith-Waterman score: 192; 24.3% identity (56.6% similar) in 226 aa overlap (1-218:1-210)

               10        20        30        40        50        60
pF1KB6 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
       :  .:: .  :.: . :  . .     ..: .::. .. . . . .: :      : .  
NP_000 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRW------NRSDE
               10        20        30        40              50    

               70        80        90       100       110       120
pF1KB6 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
        : .: :..  .:    . .... .: .::.:.:.:.    :  . .  .. ::.:::  
NP_000 SVGNVTFSFDYQKTGMDNWIKLS-GCQNITSTKCNFS----SLKLNVYEEIKLRIRAEKE
           60        70         80        90           100         

              130       140       150       160       170          
pF1KB6 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF----FCYY
          :.:  .  :  .:.. .:::: ...   . ...:..: :    ..  :.    : : 
NP_000 NT-SSWYEVDSFTPFRKAQIGPPE-VHLEAEDKAIVIHIS-PGTKDSVMWALDGLSFTYS
     110        120       130        140        150       160      

        180         190       200       210         220       230  
pF1KB6 VHYWEKG-GIQQ-VKGPFRSNSISLDNLKPSRVYCLQVQAQLL--WNKSNIFRVGHLSNI
       .  :... :... ... .  ..:   .:.:  .:::.:.: ::  :              
NP_000 LVIWKNSSGVEERIENIYSRHKIY--KLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTT
        170       180       190         200       210       220    

            240       250       260       270       280       290  
pF1KB6 SCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIE
                                                                   
NP_000 VENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCE
          230       240       250       260       270       280    

>>NP_653318 (OMIM: 605621) interleukin-20 receptor subun  (311 aa)
 initn: 122 init1:  77 opt: 191  Z-score: 231.0  bits: 51.0 E(85289): 3.9e-06
Smith-Waterman score: 262; 27.0% identity (54.3% similar) in 278 aa overlap (6-279:11-263)

                    10        20        30        40        50     
pF1KB6      MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALS
                 .:. :..   .:       : .. :::::. ..   : ...: : ::   
NP_653 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAP
               10        20        30        40        50        60

          60        70        80        90       100       110     
pF1KB6 NSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRL
       . :  : :.:...    . .:. :   .  :.   . ::: :  . .:  :..    ::.
NP_653 GET--VYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTD-DITATVPYN----LRV
                 70        80        90       100        110       

         120       130       140       150       160       170     
pF1KB6 RAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCY
       :: ::.  :::  .      :: :.    ..:.:     :.:..    :..      : .
NP_653 RATLGSQTSAWSILK-HPFNRNSTILTRPGMEITKDGFHLVIELE---DLGPQ----FEF
           120        130       140       150          160         

         180         190         200       210       220       230 
pF1KB6 YVHYW--EKGGIQQVKGPFRSNSIS--LDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSN
        : ::  : :. ..::   ::..:   :....:. .::...:. .    . : : . .:.
NP_653 LVAYWRREPGAEEHVKM-VRSGGIPVHLETMEPGAAYCVKAQTFV----KAIGRYSAFSQ
         170       180        190       200           210       220

             240       250       260       270       280       290 
pF1KB6 ISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQI
         : :....:   :  ...  :: . .: :.     ..: :.  :..:            
NP_653 TECVEVQGEA-IPLVLALFAFVGFMLILVVVP----LFVWKMGRLLQYSCCPVVVLPDTL
              230        240       250           260       270     

             300       310       320       330       
pF1KB6 EEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
                                                     
NP_653 KITNSPQKLISCRREEVDACATAVMSPEELLRAWIS          
         280       290       300       310           

>>XP_011527854 (OMIM: 107450) PREDICTED: interferon alph  (270 aa)
 initn: 122 init1:  62 opt: 189  Z-score: 229.5  bits: 50.5 E(85289): 4.8e-06
Smith-Waterman score: 213; 23.6% identity (55.6% similar) in 259 aa overlap (1-253:1-239)

               10        20        30        40        50        60
pF1KB6 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
       :  .:: .  :.: . :  . .     ..: .::. .. . . . .: :      : .  
XP_011 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRW------NRSDE
               10        20        30        40              50    

               70        80        90       100       110       120
pF1KB6 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
        : .: :..  .:    . .... .: .::.:.:.:.    :  . .  .. ::.:::  
XP_011 SVGNVTFSFDYQKTGMDNWIKLS-GCQNITSTKCNFS----SLKLNVYEEIKLRIRAEKE
           60        70         80        90           100         

              130       140       150       160       170          
pF1KB6 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF----FCYY
          :.:  .  :  .:.. .:::: ...   . ...:..: :    ..  :.    : : 
XP_011 NT-SSWYEVDSFTPFRKAQIGPPE-VHLEAEDKAIVIHIS-PGTKDSVMWALDGLSFTYS
     110        120       130        140        150       160      

        180         190       200       210       220       230    
pF1KB6 VHYWEKG-GIQQ-VKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISC
       .  :... :... ... .  ..:   .:.:  .:::.:.: :: .    ...:  : . :
XP_011 LVIWKNSSGVEERIENIYSRHKIY--KLSPETTYCLKVKAALLTS----WKIGVYSPVHC
        170       180       190         200           210       220

          240       250       260       270       280       290    
pF1KB6 YETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEY
        .: ..      . : .::                                         
XP_011 IKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHLYFRRPR          
              230       240       250       260       270          

>>XP_016862121 (OMIM: 605621) PREDICTED: interleukin-20   (264 aa)
 initn:  59 init1:  59 opt: 186  Z-score: 226.0  bits: 49.8 E(85289): 7.5e-06
Smith-Waterman score: 205; 27.1% identity (54.6% similar) in 240 aa overlap (44-279:2-216)

            20        30        40        50        60        70   
pF1KB6 GVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQVQFKYTDSK
                                     ...: : ::   . :  : :.:...    .
XP_016                              MKHLLMWSPVIAPGET--VYYSVEYQGEYES
                                            10          20         

            80        90       100       110       120       130   
pF1KB6 WFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWFQ
        .:. :   .  :.   . ::: :  . .:  :..    ::.:: ::.  :::  .    
XP_016 LYTSHIWIPSSWCSLTEGPECDVTD-DITATVPYN----LRVRATLGSQTSAWSILK-HP
      30        40        50         60            70        80    

           140       150       160       170       180         190 
pF1KB6 HYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW--EKGGIQQVKGP
         :: :.    ..:.:     :.:..    :..      : . : ::  : :. ..::  
XP_016 FNRNSTILTRPGMEITKDGFHLVIELE---DLGPQ----FEFLVAYWRREPGAEEHVKM-
            90       100       110              120       130      

               200       210       220       230       240         
pF1KB6 FRSNSIS--LDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMADASTELQQVI
        ::..:   :....:. .::...:. .    . : : . .:.  : :....:   :  ..
XP_016 VRSGGIPVHLETMEPGAAYCVKAQTFV----KAIGRYSAFSQTECVEVQGEA-IPLVLAL
         140       150       160           170       180        190

     250       260       270       280       290       300         
pF1KB6 LISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQPILEALDKD
       .  :: . .: :.     ..: :.  :..:                              
XP_016 FAFVGFMLILVVVP----LFVWKMGRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVD
              200           210       220       230       240      




337 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 01:15:28 2016 done: Sat Nov  5 01:15:29 2016
 Total Scan time:  8.360 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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