GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:41:30

Sequence gi568815597r:27566384_27769314 : 202931 bp : 48.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    779    910  132  2  0  119   76     9 0.293   2.56
 1.02 Intr +   1717   1786   70  1  1    4  119    67 0.427   0.58
 1.03 Intr +   2368   2629  262  0  1   86   60   134 0.715   7.46
 1.04 Intr +   6126   6272  147  1  0   48   61    88 0.286   2.31
 1.05 Intr +  15813  15854   42  1  0  103   80    21 0.050   1.01
 1.06 Term +  36825  37141  317  1  2   66   52   154 0.309   4.70
 1.07 PlyA +  40333  40338    6                               1.05

 2.14 PlyA -  42234  42229    6                               1.05
 2.13 Term -  46754  46531  224  0  2   47   38   299 0.615  17.88
 2.12 Intr -  46967  46836  132  0  0  132   41   200 0.999  20.32
 2.11 Intr -  48200  48047  154  2  1   85   44   266 0.997  21.55
 2.10 Intr -  48543  48467   77  1  2   88   93    47 0.999   4.43
 2.09 Intr -  49230  49051  180  1  0  -78   49   477 0.552  27.04
 2.08 Intr -  49461  49306  156  1  0   88   55   309 0.999  27.58
 2.07 Intr -  50623  50474  150  2  0   39   68   287 0.990  21.93
 2.06 Intr -  50913  50810  104  2  2  127   97    57 0.993  10.32
 2.05 Intr -  55274  55176   99  1  0   93   89    96 0.974   9.43
 2.04 Intr -  56761  56659  103  2  1   56  102   204 0.999  17.83
 2.03 Intr -  57543  57308  236  2  2   51  109   303 0.590  26.03
 2.02 Intr -  68790  68682  109  1  1   34  115    28 0.129  -0.56
 2.01 Init -  71590  71584    7  1  1   63  116     0 0.206   1.39
 2.00 Prom -  75942  75903   40                              -1.16

 3.00 Prom +  78613  78652   40                              -6.16
 3.01 Init +  78860  78954   95  1  2   95   71    58 0.360   3.60
 3.02 Intr +  79765  79942  178  1  1   41  110    53 0.277   2.72
 3.03 Intr +  82036  82196  161  0  2   21   80    97 0.532   0.99
 3.04 Term +  82906  83248  343  1  1   75   55   302 0.267  19.58
 3.05 PlyA +  83328  83333    6                               1.05

 4.03 PlyA -  83578  83573    6                               1.05
 4.02 Term -  92515  92410  106  0  1  114   46    46 0.492   0.88
 4.01 Init -  93698  93571  128  2  2   96   34   164 0.388   9.43
 4.00 Prom -  93996  93957   40                              -6.06

 5.08 PlyA -  94746  94741    6                               1.05
 5.07 Term - 100092  99998   95  1  2  121   42   163 0.994  12.99
 5.06 Intr - 101992 101843  150  2  0  122  109   233 0.983  28.93
 5.05 Intr - 102152 102075   78  0  0  121   90   127 0.999  15.72
 5.04 Intr - 102963 102586  378  1  0  108  110   189 0.039  18.04
 5.03 Intr - 119087 119056   32  1  2  135   60    10 0.087   0.67
 5.02 Intr - 121035 120789  247  1  1   78   46   281 0.550  19.42
 5.01 Init - 123290 123233   58  2  1   58   70    48 0.713   1.47
 5.00 Prom - 128524 128485   40                              -1.16

 6.00 Prom + 131374 131413   40                              -4.46
 6.01 Init + 159698 159778   81  1  0  103   91   149 0.981  17.67
 6.02 Intr + 161089 161153   65  0  2   99   65    89 0.996   5.22
 6.03 Intr + 166220 166274   55  2  1   80  127    34 0.993   5.48
 6.04 Intr + 167648 167800  153  1  0   91   94   121 0.995  13.27
 6.05 Intr + 172802 172999  198  1  0    3   35   145 0.191   0.25
 6.06 Intr + 173612 174028  417  1  0   33    5   263 0.069   6.72
 6.07 Intr + 178271 178428  158  1  2  138   91    67 0.840  10.81
 6.08 Intr + 188812 188947  136  1  1   28   86   155 0.957   9.87
 6.09 Intr + 193143 193244  102  2  0   95   62    87 0.966   7.17
 6.10 Term + 194112 194198   87  2  0   96   48    75 0.984   1.96
 6.11 PlyA + 194710 194715    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_1|323_aa
XLAEDPACCCLLPLLLAGKQQDCEFRICNPNAEPRPTGLQLPRRRGTPNPVGEKGPIVQG
GQPAEMQPVGACGGPGRAGALFVGGELGAETGDPPESAQPSLGLDAYKRRLVLSRDACAF
SNIPTAALQGQLHPHTRTKPARVGRGGLAKAPEIGPTRPYPSQPHMHCSEALTTPLQIPP
QQYMTTPIPNSATQLNIHKQLTNPDFQEQNSESHRELAGFEPSPAEPRAPVETKTDRTAG
TAATGSSGPDRGTQAPPVRCTKEPGRPVPSGGLGLGRRRHSPECWAAGSVGPSQARGFGG
RLSSGGGSDAGARLLRRGVVEEP

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_1|972_bp
nntctagctgaagatcctgcatgctgctgcttgctgccactgctgcttgcagggaagcag
caagattgtgaattcaggatctgtaatcctaacgcagagcccaggcctaccgggctccag
ttgccaaggcgacgaggcacacccaaccctgtgggtgagaagggcccgatagtacaaggt
ggacagcccgcagaaatgcagccggtgggagcctgcggcgggccgggccgggccggggcg
ctcttcgtgggcggggagctgggcgcggaaacaggggatcccccagagagcgcccagccc
agcctggggctggacgcgtacaaaaggcgacttgttctttctcgggatgcctgcgccttc
tcaaacatacctacagccgcactccagggacagctacacccacacacccgcacaaagcct
gccagggtggggcgcggggggctggcgaaagccccagaaatcggccctacacgtccgtac
cctagccagccacacatgcactgttcagaggccctgacaacacccctacagataccccca
caacagtacatgacaactccaattccaaacagtgccactcagctcaacatccataaacaa
ctgacaaacccagactttcaggaacagaacagcgaatcccacagggagttagcaggcttc
gagccgagcccagccgagccgcgggccccggtggaaacaaagaccgatcgcaccgcgggc
accgcagccaccgggtccagcggaccggaccgggggacgcaggccccccccgtgcgctgc
acaaaagagcctggccggccggtccccagcgggggtctggggctggggaggaggcgccac
tcaccggagtgctgggctgccggctccgtgggtccgagccaggcgaggggttttggggga
cgtctgtcttccggcggtggcagcgacgcgggcgcccggctgctgaggagaggagtcgtg
gaggagccctga

>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_2|576_aa
MKGAAVRGGQHPSSPRTPALAAAGAPAGSPRGRAELGSREPGMGCVFCKKLEPVATAKED
AGLEGDFRSYGAADHYGPDPTKARPASSFAHIPNYSNFSSQAINPGFLDSGTIRGVSGIG
VTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTGCIPSNYVAPVDS
IQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVKHY
KIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDAWEI
SRSSITLERRLGTGCFGDVWLGTWNGSTKVAVKTLKPGTMSPKAFLEEAQVMKLLRHDKL
VQLYAVVSEEPIYIVTEFMCHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNY
IHRDLRAANILVGERLACKIADFGLARLIKDDEYNPCQGSKFPIKWTAPEAALFGRFTIK
SDVWSFGILLTELITKGRIPYPETHPSGMNKREVLEQVEQGYHMPCPPGCPASLYEAMEQ
TWRLDPEERPTFEYLQSFLEDYFTSAEPQYQPGDQT

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_2|1731_bp
atgaaaggggcggcggtcagaggcgggcagcaccccagttctccccgcacgccggcactc
gcggctgctggagccccggctggctcaccccggggccgggcagaattgggctccagggaa
cctggaatgggctgtgtgttctgcaagaaattggagccggtggccacggccaaggaggat
gctggcctggaaggggacttcagaagctacggggcagcagaccactatgggcctgacccc
actaaggcccggcctgcatcctcatttgcccacatccccaactacagcaacttctcctct
caggccatcaaccctggcttccttgatagtggcaccatcaggggtgtgtcagggattggg
gtgaccctgttcattgccctgtatgactatgaggctcgaactgaggatgacctcaccttc
accaagggcgagaagttccacatcctgaacaatactgaaggtgactggtgggaggctcgg
tctctcagctccggaaaaactggctgcattcccagcaactacgtggcccctgttgactca
atccaagctgaagagtggtactttggaaagattgggagaaaggatgcagagaggcagctg
ctttcaccaggcaacccccagggggcctttctcattcgggaaagcgagaccaccaaaggt
gcctactccctgtccatccgggactgggatcagaccagaggcgatcatgtgaagcattac
aagatccgcaaactggacatgggcggctactacatcaccacacgggttcagttcaactcg
gtgcaggagctggtgcagcactacatggaggtgaatgacgggctgtgcaacctgctcatc
gcgccctgcaccatcatgaagccgcagacgctgggcctggccaaggacgcctgggagatc
agccgcagctccatcacgctggagcgccggctgggcaccggctgcttcggggatgtgtgg
ctgggcacgtggaacggcagcactaaggtggcggtgaagacgctgaagccgggcaccatg
tccccgaaggccttcctggaggaggcgcaggtcatgaagctgctgcggcacgacaagctg
gtgcagctgtacgccgtggtgtcggaggagcccatctacatcgtgaccgagttcatgtgt
cacggcagcttgctggattttctcaagaacccagagggccaggatttgaggctgccccaa
ttggtggacatggcagcccaggtagctgagggcatggcctacatggaacgcatgaactac
attcaccgcgacctgagggcagccaacatcctggttggggagcggctggcgtgcaagatc
gcagactttggcttggcgcgtctcatcaaggacgatgagtacaacccctgccaaggttcc
aagttccccatcaagtggacagccccagaagctgccctctttggcagattcaccatcaag
tcagacgtgtggtcctttgggatcctgctcactgagctcatcaccaagggccgaatcccc
tacccagagacccatccttcaggcatgaataaacgggaagtgttggaacaggtggagcag
ggctaccacatgccgtgccctccaggctgcccagcatccctgtacgaggccatggaacag
acctggcgtctggacccggaggagaggcctaccttcgagtacctgcagtccttcctggag
gactacttcacctccgctgaaccacagtaccagcccggggatcagacatag

>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_3|258_aa
MGNLGQVRRLSLWDYLLGLTHPRGLTTSQPGRSGLSPPAPPQQSFCMCQNVTPGIMALGM
SAVYFQVSGTKEQPVPGHPMQSILLELWGFQVHHCVPGNPRPDFMEHSKDLTLSLLDHSC
HWHGRSHSSKEYLELHRENFLLILRSAFPTGLLRAWPRDGISQYLLVELKNNMFRFLVAG
SAEGAAGAMSGHEGGKKKPPKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGP
LATGGIKKSGEKQAVPCA

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_3|777_bp
atggggaacctgggccaagtacggcggctgagcctgtgggactacctcttggggctgacc
caccccagggggctcacaacaagtcaacctggcaggtcaggactgagccctccagctccg
ccacagcagtccttctgcatgtgccaaaatgtgacaccagggatcatggccttggggatg
tctgctgtttatttccaagtcagtggcactaaggagcagccagtcccagggcacccaatg
cagagcatcctgcttgagctttggggcttccaggtacaccactgcgtgccagggaacccc
aggccagacttcatggaacacagcaaggacctgaccctcagcctcttggatcactcctgc
cactggcatgggaggagccatagcagcaaggagtacctggagctgcacagggagaacttc
ctcctcatcctcagatctgcctttcccactggactcttgagggcctggcccagagatggc
atctctcagtatttgctggttgaattgaaaaataacatgtttaggtttctggtggcaggg
tctgcggaaggggcggcaggtgccatgtccggccacgaaggtggcaagaagaagccaccg
aaacagcccaagaagcaggccaaggagatggacgaggaagacaaggctttcaagcagaaa
caaaaagaggagcagaagaaactcgaggagctaaaagcgaaggccgcggggaaggggccc
ttggccacaggtggaattaagaaatctggcgaaaagcaagctgttccttgtgcctga

>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_4|77_aa
MGGGGGPAFAQTAVGRWGGGAVGRPRRLQGVGVSRGTFMKPASDTNLCWDHFFPEPSPHT
FYLANSSSLIIMEEDGS

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_4|234_bp
atgggcggagggggaggcccggcgttcgcgcagacggcggtggggcggtggggcggtggg
gcggtggggcggccgcgccggcttcagggcgtcggggtctcccggggcacgttcatgaag
ccggcgagtgacacaaacctctgctgggatcacttcttccctgagccatcccctcacacc
ttttacctggctaactcctcatccctgatcatcatggaagaggatggatcctga

>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_5|345_aa
MKLKESAVSDLGAKPSSDFRVLLSDWPGDNTLFQLKFMVKQLEKPDKKAEKHSYANQAKV
KKSLQQKNVECTRVYTKNTICKENSSVNWLYMASAWTQWPPRISEPLGGDPIGLVTEPAR
GATMRQKAVSLFLCYLLLFTCSGVEAGENAGKDAGKGTGKGAGKDASKGAGKDAGKDAGK
DAGKDAGKDAGKDAGKGAGKDAGKDAGKDAGKDAGKDAGKGAGKDAGKDAGKDVGKDAGK
KKCSESSDSGSGFWKALTFMAVGGGLAVAGLPALGFTGAGIAANSVAASLMSWSAILNGG
GVPAGGLVATLQSLGAGGSSVVIGNIGALMGYATHKYLDSEEDEE

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_5|1038_bp
atgaaattgaaagagagtgctgtgtcagaccttggtgctaaaccaagttcagatttcagg
gtgcttctgtcagactggccaggggacaataccctgttccagttgaaatttatggtgaag
cagctggagaaaccagacaagaaggcagaaaagcactcctacgccaaccaggccaaagtg
aagaagtcccttcagcagaaaaatgtagagtgcacccgtgtgtacaccaagaacaccatc
tgcaaggagaacagcagcgtgaactggctctacatggcatccgcctggacacagtggccc
ccgaggatttcagagcccctgggaggagatcccattggtctagtgacggagcccgcgcgc
ggcgccaccatgcggcagaaggcggtatcgcttttcttgtgctacctgctgctcttcact
tgcagtggggtggaggcaggtgagaatgcgggtaaggatgcaggtaaggggacaggtaag
ggtgcaggtaaggatgcaagtaagggtgcaggtaaggatgcgggtaaggatgcaggtaaa
gatgcgggtaaggatgcaggtaaggatgcgggtaaggatgcaggtaagggtgcaggtaag
gatgcgggtaaggatgcaggtaaggatgcgggtaaggatgcaggtaaggatgcaggtaag
ggtgcgggtaaggatgcgggtaaggatgcaggtaaggatgtgggtaaggatgcaggtaag
aaaaagtgctcggagagctcggacagcggctccgggttctggaaggccctgaccttcatg
gccgtcggaggaggactcgcagtcgccgggctgcccgcgctgggcttcaccggcgccggc
atcgcggccaactcggtggctgcctcgctgatgagctggtctgcgatcctgaatgggggc
ggcgtgcccgccggggggctagtggccacgctgcagagcctcggggctggtggcagcagc
gtcgtcataggtaatattggtgccctgatgggctacgccacccacaagtatctcgatagt
gaggaggatgaggagtag

>gi568815597r:27566384_27769314|GENSCAN_predicted_peptide_6|483_aa
MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQESKTNTICKKCAQ
NVQLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKDA
GGKAGAPIVCMLNQGLKHVSEGCVFAYCQVEEKPYWKDPNNDFRKNLEVTTVPTLLKYGT
PQKLQPGQFRGQVPPYSRLWVHLDVMDGHFVPNVTFGYPVVESFQKQLVQDLFFDIHVMV
SKLEQWVKSIAIAEASQYTFHLEATKYSEALIEDIWENGMKVGLTIKPGTTVEYLAPWTN
QIDTALVITVEPGFGRQKFMDDMVDGKLLCWLCTLSYKRVLQKTKEQRKHLSSSSRAGHQ
EKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEK
KITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAI
TSP

>gi568815597r:27566384_27769314|GENSCAN_predicted_CDS_6|1452_bp
atggcggcgctctacgcctgcaccaagtgccaccagcgcttccccttcgaggcgctgtct
caggggcagcagctgtgcaaggaatgtcggattgcacaccctgttgtgaagtgcacctac
tgcaggactgagtaccagcaggagagtaaaaccaatacaatatgcaagaaatgtgctcag
aacgtgcagttgtatggaacgcccaaaccttgtcagtattgcaacataattgcagcattt
attgggaataaatgccagcgctgcacaaattcagaaaagaagtatggaccaccctattct
tgtgaacagtgcaagcagcagtgtgcatttgacaggaaagatgatagaaagaaggatgct
ggaggaaaagctggtgcccctattgtatgcatgctgaaccaggggctgaagcatgttagt
gaaggatgtgtgttcgcctactgccaagtagaagaaaagccttattggaaagatccaaat
aatgacttcagaaaaaacttggaagtaaccacagtgcctacactacttaaatatggaaca
cctcaaaaactgcaacctggccagtttaggggtcaagtgcctccgtattctagactctgg
gtccacctggatgtcatggatgggcactttgttcccaacgtcacctttggttatcctgtg
gtagaaagctttcaaaagcagctagtccaggaccttttctttgacatacatgtgatggtg
tccaagctggaacagtgggtaaaatcaatagctatagcagaagccagtcagtacaccttt
catcttgaggctactaagtactcagaggctttgattgaagacatttgggagaatgggatg
aaggttggccttaccatcaaaccaggaactacagttgagtatttggcaccatggactaat
caaatagatacggccttggttatcacagtggaacctgggtttggaaggcagaaattcatg
gatgatatggtagatgggaaattgctgtgctggctgtgcacactttcatacaaacgggtc
cttcagaagaccaaagagcagaggaaacacctgagtagctcttctcgtgctggccaccag
gagaaggagcagtatagtcgcctgagtggtggtggccattataacagcttctccccagac
ctggctctggactcaccaggcactgaccactttgtcatcattgcccaactgaaggaagaa
gtggctaccctgaagaagatgttgcatcaaaaggatcaaatgattttagagaaagagaag
aagattacagagttgaaggctgattttcagtaccaggaatcgcagatgagagccaaaatg
aaccagatggagaaaacccacaaagaagtcacagaacaactgcaggccaaaaaccgagag
ctcctgaagcaggcagctgctttgtccaagagcaagaagtcagagaagtcaggagctata
acctctccatga