GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:53:46

Sequence gi568815596f:64355343_64558425 : 203083 bp : 42.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +     65    209  145  2  1  112   55    80 0.863   3.50
 1.02 PlyA +    774    779    6                               1.05

 2.12 PlyA -   2162   2157    6                               1.05
 2.11 Term -   4730   4627  104  0  2   76   53    76 0.371   0.36
 2.10 Intr -   5725   5538  188  0  2   83  107   214 0.688  21.21
 2.09 Intr -  19456  19281  176  1  2  102   52    81 0.218   3.72
 2.08 Intr -  20157  20024  134  1  2   50   86    52 0.534   0.64
 2.07 Intr -  21734  21549  186  0  0   57   60   141 0.540   6.94
 2.06 Intr -  24053  23909  145  2  1   69   41    77 0.041   0.03
 2.05 Intr -  31802  31696  107  0  2   82   91    58 0.061   4.51
 2.04 Intr -  39709  39609  101  0  2   69   51    90 0.015   2.23
 2.03 Intr -  44898  44875   24  2  0  116  103    20 0.136   2.52
 2.02 Intr -  45242  45171   72  1  0   56   94    73 0.152   2.30
 2.01 Init -  47836  47601  236  1  2   73   50   140 0.183   6.36
 2.00 Prom -  53353  53314   40                              -4.55

 3.00 Prom +  53479  53518   40                              -7.25
 3.01 Init +  58998  59114  117  2  0   63   47    86 0.195   2.25
 3.02 Intr +  62404  62518  115  0  1  104   67    53 0.218   3.90
 3.03 Intr +  75490  75515   26  2  2  123  100    -1 0.053   1.43
 3.04 Term +  80511  80666  156  2  0   73   36   151 0.137   5.35
 3.05 PlyA +  82472  82477    6                               1.05

 4.00 Prom +  96639  96678   40                              -6.05
 4.01 Init +  99469  99534   66  0  0   91   92    84 0.660  10.35
 4.02 Intr + 100247 100335   89  1  2  111   94    99 0.999  10.65
 4.03 Intr + 100946 101123  178  2  1   75   96   167 0.979  15.20
 4.04 Term + 102943 103086  144  0  0   83   34   137 0.988   4.73
 4.05 PlyA + 103274 103279    6                               1.05

 5.03 PlyA - 103305 103300    6                               1.05
 5.02 Term - 105566 105349  218  0  2   96   41   106 0.055   3.02
 5.01 Init - 118127 117887  241  2  1   64   51   185 0.384  10.48
 5.00 Prom - 120098 120059   40                              -4.15

 6.00 Prom + 122460 122499   40                              -9.65
 6.01 Init + 123948 124096  149  2  2   65   97   119 0.372  10.22
 6.02 Intr + 133393 133500  108  1  0   47   92   162 0.221  10.98
 6.03 Intr + 141642 141783  142  0  1   35   44   169 0.617   6.63
 6.04 Intr + 145177 145350  174  0  0   92   10   164 0.110   8.21
 6.05 Term + 149519 149800  282  1  0   39   49   225 0.705   8.14
 6.06 PlyA + 150494 150499    6                               1.05

 7.00 Prom + 151455 151494   40                              -0.85
 7.01 Init + 156679 156767   89  0  2   52   22   127 0.487   0.66
 7.02 Intr + 160555 160752  198  1  0   27   -3   200 0.416   2.34
 7.03 Term + 161953 162127  175  1  1   70   49   220 0.904  12.55
 7.04 PlyA + 164203 164208    6                               1.05

 8.02 PlyA - 165412 165407    6                               1.05
 8.01 Sngl - 169247 168765  483  2  0   83   50   234 0.177  15.00
 8.00 Prom - 177774 177735   40                              -5.25

 9.00 Prom + 180818 180857   40                              -6.55
 9.01 Sngl + 196133 198097 1965  1  0   78   41  1644 0.991 152.40
 9.02 PlyA + 199102 199107    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +   9717   9805   89  2  2   73  100    91 0.832   8.96
S.002 Term +  12701  12863  163  2  1   69   50   123 0.816   3.03
S.003 Term -  52919  52719  201  2  0   50   46   197 0.918   8.11
S.004 Term + 145177 145458  282  0  0   92   42   220 0.880  12.24


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_1|48_aa
XALEMSLKSLMVCELPGATAHPGDNGQGKQTTCPLHFLGHLSDLNLGG

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_1|147_bp
nnggccctggaaatgtcactgaaatctctcatggtgtgtgaacttcccggtgccacagca
catcctggagataatggccaagggaagcagaccacttgcccattgcactttctgggccat
ctgtctgatttgaacttaggaggatga

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_2|490_aa
MVGNVRGLIEGGQVIPHFPNETEVDTQTNNNCSDSFSFPEPQLTAVPSGFVAFHNSFDFR
TSLTLAPTPEPKEPPHLRNLSSLEASEPGVTLQGECQGQAKESLGGKKECMFAVLDVFTY
ECKCAEIHSARLKSEYTTDEPLGTGDFEGFKYLKGKSGWWGKREGMVTLLSLYVAGEKEQ
GTAHARPQVDTSCLECINVDDDMFEMNKHLTYLRSIITLGELFPEDPGSRRCRSLQKAQP
RIELGPRHVEAEDRASEVGAVGCVAIQIDFAHCVIIDMDSVAVIKDQNNRELAHLGHQDI
LEMPPRHESHLDYSKSQHRVKPELMVSTPRQYDLKDFLPPPTVKPGRAHSALLEQAHTQK
SERVNPPGQLLTNGVWERVDEFSPLLSLRWTMLRLFHSTEFLCHLLFGPLSGCSQCLDVL
TGLVPDGCYARSCGDELGFDAQLNHLLCILSKLLNSENGAECARHWLPAPWAAASAKGKI
RLPFIHSCCQ

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_2|1473_bp
atggttggtaatgtgaggggccttattgagggggggcaagtcattccacattttccaaat
gagaccgaagtggatacacagactaacaataactgcagtgactcattctcctttccagaa
cctcaactcacagctgtccccagtggctttgtggcatttcacaacagttttgactttaga
acctctctcaccttggcccccactccagagccaaaggaacccccacatctcaggaatctg
tcatctctggaggcctcagaacctggtgtcacattacagggtgaatgccagggacaagct
aaagagagcttaggaggaaagaaagaatgcatgtttgctgtcctggatgtgttcacctat
gaatgtaagtgtgctgagatacacagtgcaaggctgaagtcagagtacaccactgatgaa
cccctgggaactggtgattttgagggcttcaaatacttaaaggggaaaagcggttggtgg
ggcaagagagagggtatggtcacattactgagtctatatgttgcaggagaaaaggagcag
ggcacggcccatgccaggccccaggtagacacttcatgtctggaatgcataaatgtggat
gatgacatgtttgagatgaacaagcacctcacgtacttgagaagcatcatcactttgggg
gaacttttccctgaagacccggggtctcggcggtgcaggagtcttcagaaagcccagcct
cgcatagaattaggccctcggcatgttgaagctgaagacagagcttctgaggtgggggca
gttggctgtgttgctatccagattgactttgcccactgtgtcattatagatatggattca
gttgctgtaattaaggaccaaaataatagagaattagctcatttggggcaccaggacatc
ctggagatgcctccccgccatgagtcccaccttgactacagcaagtcccagcacagagtt
aagccagagctgatggtgtcaactcccaggcaatatgacctcaaggacttcctacctcca
ccaactgtgaaaccagggagagctcactcagccttgctggaacaggcacacacccagaag
tctgagagagttaaccccccggggcaactgctgaccaatggggtatgggagagggtggat
gaattctcccctctcctgagtctcaggtggacaatgctaaggctttttcattctacggaa
ttcctgtgtcacctgctgtttggaccactctctggctgctcacagtgccttgacgtcctc
acagggttagttcctgatggttgttatgcacgcagctgtggagatgaacttggatttgat
gctcagctcaaccacttactgtgtatcttgagcaagttacttaactctgagaatggggct
gagtgtgcacggcactggctacccgctccatgggctgctgcctctgccaaagggaagata
agacttcccttcatccacagctgctgccagtga

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_3|137_aa
MCRLKPGAEKNTEKAVPESWKPISPKNRLATMMHSLKFRVRQSWSDRGHLRDLVKEKWSQ
GYIWCRVTGVFASLPCTGSPYIILFEGRKILDSSVPLTIPTESQDPDCRNAGIPMSQFLA
FPSFYLIPQKVQRSPEL

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_3|414_bp
atgtgcagactaaagccaggtgctgagaaaaacacagaaaaggctgtccctgagagctgg
aaacctatatcccctaaaaacaggctagcaaccatgatgcactctcttaagtttagggtc
aggcagtcctggagtgatcgtgggcatctcagggatctggttaaggagaagtggagtcag
ggatacatctggtgtcgggttacaggggtgtttgcatcacttccatgtacaggttcaccc
tatatcattttattcgaagggaggaaaattcttgactcttctgttcctctgaccatcccc
actgaatctcaagatcctgactgccggaatgcaggcatccccatgtctcaattcttggct
tttccctctttctacctcatccctcagaaagttcagcgatctccagagctataa

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_4|158_aa
MAGRDARQPPLCRATASQVCAWIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCG
DSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPR
FRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_4|477_bp
atggcgggtagggacgcccgacagccccctctgtgccgtgcaaccgccagccaggtgtgc
gcgtggatagttccattttgtgggcacattaaaggtggcatgagaccaggcaagaaggtg
ttagtgatgggcatcgtagacctcaacccagagagctttgcaatcagcttgacctgtggg
gactcagaagaccctcctgccgatgtggcaatcgaactcaaagctgtgttcacagatcgg
cagctactcagaaattcttgtatatctggggagaggggtgaagaacagtcagcaatccct
tactttccattcattccagaccagccattcagggtggaaattctttgtgagcacccacgt
ttccgagtgtttgtggatggacaccaactttttgatttttaccatcgcattcaaacgtta
tctgcaattgacaccataaagataaatggagacctccagatcaccaagcttggctga

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_5|152_aa
MAVKTMSCTSQNHRHPSRTSAELQNRVPFPSASVKQADAASPSSAAGSAIQPVGLDLLST
REPNTCTVPPPCGLLRALVQEPDCYLYSLVLVIAELGLWSEITPYIPEYFPVEALHCIFH
PEILTLDLTGPGEGVNIVFSLQLKPLTNLGYT

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_5|459_bp
atggctgtgaagacaatgtcatgtacttcacagaaccacagacaccccagtagaacgtct
gcagaacttcagaatcgagtgccctttccctcagcttcagtgaaacaggcagatgcagca
agccccagctctgcagcaggttctgctattcagcccgttggacttgacctcctgtccacc
agggagccaaatacatgcactgtccctcccccatgtggactgctcagggccctggttcag
gagcctgattgttatttatactccttggttttggttattgcagaactagggctctggtca
gaaataacaccttacatacccgaatactttcctgtggaagctttacattgcattttccat
cctgaaattctcaccttagaccttacaggcccaggagagggtgtgaatattgttttcagt
ttacagctaaagccccttactaatttgggctatacctga

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_6|284_aa
MGLEDLQTLLGLTGKCGSSPQACKDFFPLGIQRLFQCKEHGYASVSDSPRRSTPQSTSSH
WAVDHSSSGSEHLIPRLIAAAASRNRRGSFIKLLESMGMDDKSKVDTLREEESAGGEPWD
VSAFAAHATTDEPVFVERLRKSLPGEMKAESPGKKGDGSLETGRKKVSGGDMSGADARSK
GTNVDGTFFQIADGTNLLPVPRSQGSLVRTGCTGRGAVSREVDVKEAQSLLERPLEAEKW
GEEGIPRLLRSPLHPLTVPPISGSSPEATWQRSLRKKGGSTEAT

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_6|855_bp
atggggctggaagatttgcagactcttctgggcctcaccggaaagtgcggctctagcccc
caagcatgtaaggacttttttcccctaggcattcagaggctttttcagtgtaaggaacat
ggctatgcttcggtcagcgatagccccaggagatctacacctcagagcacttcctcccac
tgggcagtggaccactcgagcagcggttctgaacacctgatccccagactcatcgcagca
gcagcatctaggaacagaagaggcagcttcatcaagcttttagaaagcatgggaatggat
gataaatcaaaggtagatacactgagagaagaggaatccgctggaggggaaccttgggat
gtttctgcttttgcagctcatgcaacaacagatgagccagtttttgtggagagactgaga
aaatcacttcctggagaaatgaaggctgaaagccctggcaaaaaaggagatggttctcta
gagacaggcaggaaaaaagtttcaggaggagacatgtcaggtgctgatgcgagaagcaaa
ggtaccaatgttgatggcaccttcttccagatcgctgatgggacaaacttattacccgtg
cccagaagccagggctccctggtgagaactggctgcaccggcagaggagctgtctcacgg
gaggtggatgtgaaggaggcacagtccctgttggagaggccactggaagcagagaaatgg
ggagaggaaggaatacccaggcttcttcgttccccgctccatcctctcacagtgcctccc
attagcggaagttctccagaagccacttggcaaaggagcctgagaaagaaaggaggaagc
actgaggcaacatga

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_7|153_aa
MGRLAGRGADPPTSLPDGAAGRAEGLLTSHSSTPEVQNVSREFSIENLLKASLTMRLPQV
ILSFGEQQQTLEGPRISNPSRQNYLRQYQWQLAASGSSTPEVQNVIREFGIDNLWKASVT
VCSGEQRQTLEGLRISSPSRQNSLRQYQWQLAA

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_7|462_bp
atggggcggctggccgggcggggggccgacccccccacctccctcccggacggggcggct
ggccgggcagaggggctcctcacttcccactctagcacaccagaggtccaaaatgtcagc
agggagttcagcattgaaaatctcttgaaagctagtttgacaatgcggctcccccaagtg
attttaagttttggagagcagcagcagaccctggagggacccagaattagcaaccccagt
agacagaattacctgaggcaatatcagtggcagctggcagcttcaggctctagcacacca
gaggtccaaaatgtcatcagggagttcggcattgacaatctctggaaagccagtgtgacc
gtgtgttcaggggagcagcggcagacacttgagggactcagaattagcagccccagtaga
cagaattctctgaggcagtatcagtggcaattggcagcttaa

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_8|160_aa
MGMAQGPGEELTPRGRTVYSDAELVRAEGRLLTALSAQQHHGRPPGVSPLPRDPHPTTLR
PLPPPPPPPPPPPRRPPAHSTHSPIMQRGNRCRRHVTSGRRWLGRDRALVGAVGWGRTLQ
GNWCHRTLIPAQALSCRAPTAILGAGKLPFPFTSLRVIEL

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_8|483_bp
atgggcatggctcaggggcccggggaggaactgactccccggggaaggaccgtctattcc
gacgcggaactggtgagagcggaaggccggctgctcacagccctgtcagcgcagcagcac
catggacgcccacccggagtttcaccgctgccgcgggacccccatcccactaccctccgc
cctcttccgccgccgccgccgcctcctccacctcctccgcggagaccccccgcccactcc
acacactctcccatcatgcagcgggggaaccgctgccgccgacacgtcacttccgggcgc
aggtggctaggtcgggaccgggcgctggtgggtgctgtggggtgggggaggacactccag
gggaattggtgtcacagaacgcttatccctgcgcaggcgctgtcgtgcagagcgccgacc
gccattttgggtgcgggcaagctgccctttccttttacttccttgcgagtcatagagctg
tag

>gi568815596f:64355343_64558425|GENSCAN_predicted_peptide_9|654_aa
MEPDIIRMYSSSPPPLDNGAEDDDDDEFGEFGGFSEVSPSGVGFVDFDTPDYTRPKEEFV
PSNHFMPIHEFSENVDSLTSFKSIKNGNDKDITAELSAPVKGQSDVLLSTTSKEIISSEM
LATSIDGMERPGNLNKVVEQRQNVGTLESFSPGDFRTNMNVVHQNKQLESCNGEKPPCLE
ILTNGFAVLETVNPQGTDDLDNVADSKGRKPLSTHSTEYNLDSVPSPAEEFADFATFSKK
ERIQLEEIECAVLNDREALTIRENNKINRVNELNSVKEVALGRSLDNKGDTDGEDQVCVS
EISIVTNRGFSVEKQGLPTLQQDEFLQSGVQSKAWSLVDSADNSEAIRREQCKTEEKLDL
LTSKCAHLCMDSVKTSDDEVGSPKEESRKFTNFQSPNIDPTEENDLDDSLSVKNGDSSND
FVTCNDINEDDFGDFGDFGSASGSTPPFVTGTQDSMSDATFEESSEHFPHFSEPGDDFGE
FGDINAVSCQEETILTKSDLKQTSDNLSEECQLARKSSGTGTEPVAKLKNGQEGEIGHFD
SVPNIQDDCNGFQDSDDFADFSSAGPSQVVDWNAFEDEQKDSCSWAAFGDQQATESHHRK
EAWQSHRTDENIDTPGTPKTHSVPSATSKGAVASGHLQESATSVQVFTNFLYFV

>gi568815596f:64355343_64558425|GENSCAN_predicted_CDS_9|1965_bp
atggagccagacatcattcgaatgtactcttcatccccaccaccattagacaatggagca
gaggatgatgatgatgatgaatttggggaatttggtgggttttcagaagttagcccttct
ggtgtagggtttgttgatttcgatacaccagattatactcgtcccaaggaagagtttgta
ccttcaaaccattttatgccaattcatgaattctcagaaaatgtagatagccttacaagc
tttaagtccattaaaaatggtaatgataaggacatcactgctgaactttctgctcctgtg
aaaggacagtctgatgttttactttctaccaccagcaaagaaataatttcatctgaaatg
ttagctacttccattgatggcatggaaagaccaggaaatttaaataaagtagtggagcag
agacagaatgttggaacacttgaaagtttctctccaggagattttagaactaatatgaat
gttgttcatcaaaacaagcagttagagagctgcaatggtgaaaagcctccttgtctggag
attctaacaaatgggtttgcagtgttggaaactgtaaatcctcagggaacagatgatctg
gacaatgtagctgattcaaagggacggaagcctcttagcactcatagcactgagtataat
ttagactctgtacctagtcctgctgaggaatttgcagattttgccacattttccaaaaag
gaaaggatacaattagaagaaatagaatgtgcagttttaaatgatagagaagcactaacc
attcgggaaaacaataaaattaatagagtcaatgaactgaattctgtaaaagaagtggct
ttgggtagaagcttggataacaaaggagacactgatggagaggatcaggtttgtgtttca
gaaataagcatagtgactaacagaggtttcagtgttgaaaaacaaggccttccaacactg
caacaggatgaatttttacagtcaggtgttcagtcaaaggcttggagtttggtagactca
gctgataattcagaagccattaggagagaacaatgtaaaactgaagaaaaacttgactta
cttacttctaaatgtgctcacctatgcatggattctgttaaaacttctgatgatgaagtt
ggttctcccaaagaagaaagtagaaagtttactaatttccaaagcccaaacattgacccc
acagaagaaaatgatttggatgattctttaagtgtaaaaaatggtgatagtagtaatgac
tttgtgacttgcaatgatatcaatgaagatgattttggtgattttggtgactttggctct
gccagtggctcaactccaccttttgttactggtactcaagattcaatgagtgatgccact
tttgaagagtcttcagagcactttccacattttagtgaaccaggtgatgactttggagaa
tttggggatataaatgctgtttcttgccaagaggagacaatattaacaaagtcagaccta
aaacagacttctgataatttatcagaagaatgtcaattggcaagaaaatctagtggaaca
ggcactgaacctgttgcaaaacttaaaaatgggcaagaaggtgagattggacattttgat
tctgtgccaaatattcaggatgactgcaatggttttcaagactctgatgattttgcagac
ttcagttcagctggtcctagccaagttgtagattggaatgcttttgaggatgaacaaaaa
gatagttgttcttgggctgcttttggagaccagcaggctactgaatctcatcatcgaaag
gaagcctggcagtcacataggacagatgaaaatattgatactccaggaacccccaaaacg
cacagtgtaccttcagcaacttccaaaggagcagttgctagtggccatttacaggaatca
gccacttcagttcaggtatttactaattttctctattttgtatga