GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:49:05

Sequence gi568815596f:188383429_188694008 : 310580 bp : 35.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    535    530    6                               1.05
 1.01 Sngl -   2517   2110  408  0  0   43   32   223 0.716   8.24
 1.00 Prom -  11157  11118   40                              -5.65

 2.04 PlyA -  11544  11539    6                               1.05
 2.03 Term -  13715  13341  375  2  0    1   54   245 0.137   6.15
 2.02 Intr -  29114  28920  195  2  0   72  116   105 0.571  10.39
 2.01 Init -  52247  52179   69  2  0   36  115    33 0.069   1.90
 2.00 Prom -  62427  62388   40                              -4.95

 3.00 Prom +  63744  63783   40                              -6.85
 3.01 Sngl +  72296  73042  747  1  0   49   48   268 0.684  14.83
 3.02 PlyA +  74185  74190    6                               1.05

 4.03 PlyA -  74430  74425    6                               1.05
 4.02 Term -  80658  80546  113  1  2   44   38   113 0.070  -0.36
 4.01 Init - 110607 110523   85  0  1   72  113    50 0.801   6.93
 4.00 Prom - 122918 122879   40                              -3.45

 5.03 PlyA - 123866 123861    6                               1.05
 5.02 Term - 134239 134166   74  2  2   51   47   125 0.610   1.79
 5.01 Init - 137279 137264   16  2  1   76  100    12 0.568   1.66
 5.00 Prom - 141175 141136   40                              -3.95

 6.00 Prom + 147519 147558   40                              -3.55
 6.01 Init + 148977 149027   51  2  0   77   75    80 0.144   6.81
 6.02 Intr + 157753 157890  138  0  0   93   75    19 0.008   0.84
 6.03 Intr + 185811 185927  117  2  0   54   70    59 0.200   0.44
 6.04 Intr + 186600 186692   93  2  0   53   81    84 0.318   3.44
 6.05 Intr + 200837 200975  139  1  1   92   57   120 0.787   8.42
 6.06 Intr + 204427 204521   95  2  2  105   62   134 0.719  11.26
 6.07 Term + 216718 216729   12  0  0   98   43     1 0.026  -6.17
 6.08 PlyA + 217105 217110    6                               1.05

 7.00 Prom + 219787 219826   40                              -5.95
 7.01 Init + 222226 222328  103  0  1   60   68   116 0.685   5.25
 7.02 Intr + 222881 223133  253  0  1   58   97   189 0.202  12.37
 7.03 Term + 239199 239334  136  0  1   46   47    91 0.031  -2.69
 7.04 PlyA + 239448 239453    6                               1.05

 8.05 PlyA - 239777 239772    6                               1.05
 8.04 Term - 243923 243837   87  2  0  116   42    62 0.240   1.08
 8.03 Intr - 268938 268886   53  1  2   98   66    75 0.203   4.01
 8.02 Intr - 270095 269902  194  1  2   45   67   119 0.623   3.71
 8.01 Init - 280972 280845  128  1  2   55   97    93 0.635   6.58
 8.00 Prom - 305120 305081   40                              -0.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 154623 154318  306  0  0   44   41   214 0.943   7.92
S.002 Init + 286850 286974  125  1  2   71   86   118 0.825   9.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_1|135_aa
MWESLELPKDLLNGFDQNADNDMDNDIQAEVVSDRDEELVGNWSQGDSCYVLGKRLAAFC
SCPRDLWNFELERGDFGYLEEGMSKQQSIQDVTWVLLKTFSFIREAEHTSSENLQSDNAI
EKKIPFSEEKFKLAA

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_1|408_bp
atgtgggaaagtttggaactccctaaagacttgttgaatggctttgaccaaaatgctgat
aatgatatggacaatgacatccaggctgaggtggtctcagacagagatgaggaacttgtt
gggaactggagccaaggtgactcttgttatgttttaggaaagagactggcggcattttgc
tcctgccctagagatttgtggaactttgaacttgagagaggtgatttcgggtatctggag
gaaggaatgtctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagacattc
agttttataagggaagcagagcatacaagttcagaaaatttgcagtctgacaatgcaata
gaaaagaaaatcccgttttctgaggagaaattcaagctagctgcataa

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_2|212_aa
MRIQPRKLLYFSLVIPYAKDTGMVLWEGNRGSSRGHNNDSIKLEVKIATSYFGLFLPLSQ
QAKKRVTVLAGVTEADVKMKSHYYFTMKKQGRNLTRKLKEITDALKEVVGYSLHLLSQAE
NQVLRMWEWDKLPSGYTLLLQNLAIQATGEGLTLTSAETNLGSRGQYKSGSSSRKRRVHS
QSPARMEGNHSSSYFTGNFVEACQLTQVTVAG

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_2|639_bp
atgagaatacagcccagaaaactcctttatttcagcctggtgataccctacgccaaggac
acaggtatggtgttatgggagggaaaccgtgggagttccagaggacacaacaatgattcc
attaaactggaagttaagattgccaccagctactttgggctcttcctacctctgagtcaa
caggctaagaagagagttacagtgttagctggggtcactgaagcggatgtgaagatgaaa
tcacactattacttcacaatgaagaagcaaggtagaaacttaacaagaaaactgaaagaa
atcacagatgctttgaaagaggtggtaggctacagcctgcatcttctaagccaggcagaa
aaccaagtcctacgaatgtgggagtgggataaactgccttcagggtatacactcctactg
cagaacctggcaatccaggctacaggggaaggccttaccctaaccagtgctgagactaat
ttagggagccgtgggcaatataaaagtgggagcagcagcaggaagagacgtgtgcattcc
cagtctccagcacggatggagggaaaccattcctcatcctacttcacaggaaatttcgtg
gaagcctgccagctaactcaggtgactgtggcaggttga

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_3|248_aa
MWKRIWNWVTGRGWNSLEGSEEDRKMWESLELPRHLLNGFDQNADSHMDNKVQAELVSGE
EEELVRNWNKGDSYYVLAKRLVAFCSCPRDLWNFELERDDLGYLVEEISKQQSIQEVTWV
LLKAFSFKWEIELKRLENLQPDKAIEKKIPFSEEKFKLAAVICISNLHKNVNHQDNGENV
SRACQRPLQQPLPSRAGRPRKKNRFSGLGLRSPCCVQPRNLVPSIPAAPPSLKWTNVELG
LWLQRVQT

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_3|747_bp
atgtggaagcgaatttggaactgggtaacaggcagaggttggaacagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagacacttgttgaatggcttt
gaccaaaatgctgatagccatatggacaataaagtccaggctgagttggtctcaggtgaa
gaggaggaacttgttaggaactggaacaaaggtgactcttattatgttttagcaaagaga
ctggtggcattttgctcctgccctagagatttgtggaactttgaacttgagagagatgat
ttagggtatctggtggaagaaatttctaaacagcaaagcattcaagaggtaacttgggtg
ctgttaaaggcattcagtttcaaatgggaaatagagcttaaacgtttggaaaatttgcag
cctgacaaggcaatagaaaagaaaatcccattttctgaggagaaattcaagctagctgca
gtaatttgcataagtaatttgcataagaatgttaatcaccaagacaatggggaaaatgtc
tccagggcatgtcagagacctttgcaacagcctctcccatcacgtgccggaaggcctagg
aagaaaaatcggttttctgggctgggcctgaggtccccgtgctgtgtgcagcctaggaac
ttggtgccttccatcccagccgctccgccatcgctgaaatggacgaatgtagagcttgga
ctgtggcttcagagggtgcaaacttaa

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_4|65_aa
MNTLSRDWLRRAHDPYQTYKGQQDSIQEDTLTSTSIKMIQEKMTSPNELNKTSGNNPGET
EICDL

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_4|198_bp
atgaacacattatccagagactggctaagaagggcacatgatccatatcaaacctacaag
ggtcagcaagattctattcaggaagacacattaacatctacaagtatcaagatgatccag
gaaaagatgacctcaccaaatgaactaaataagacatcagggaacaatcctggagaaaca
gagatatgtgacctttga

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_5|29_aa
MRIVEDGSPDQSADDKPCSSPQNRQLAFE

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_5|90_bp
atgaggatagtggaagatgggtcacctgatcagtcagcagatgacaagccctgctcaagt
ccacagaaccgccagttggcttttgagtga

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_6|214_aa
MATTNYRYKMATTYVYREVQHNCQLHRISFCADDKTDKRIFTFICKDSESNKHLCYVFDS
EKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETENMELKNKVQDL
ENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPPPVPSRSTEIK
RDLFGAEPFDPFNCGAADFPPDIQSKLDEMQVHI

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_6|645_bp
atggctaccactaactaccgctacaagatggctaccacctacgtttatagggaagttcaa
cacaattgccagcttcatagaatatctttttgtgcagatgataaaactgacaagaggata
ttcactttcatatgcaaagattctgagtcaaataaacatttgtgctatgtatttgacagc
gaaaagtgtgctgaagagatcactttaacaattggccaagcatttgacctggcatacagg
aaatttctagaatcaggaggaaaagatgttgaaacaagaaaacagatcgcagggttacaa
aaaagaatccaagacttagaaacagaaaatatggaacttaaaaataaagtacaagatttg
gaaaaccaactgagaataactcaagtatcagcacctccagcaggcagtatgacacctaag
tcgccctccactgacatctttgatatgattccattttctccaatatcacaccagtcttcg
atgcctactcgcaatggcacacagccacctccagtacctagtagatctactgagattaaa
cgggacctgtttggagcagaaccttttgacccatttaactgtggagcagcagatttccct
ccagatattcaatcaaaattagatgagatgcaggtacacatttaa

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_7|163_aa
MKPHTLAVSVTALTVAHLEFVPSDVRMCLEFLPSDSEAQLASPSGSRTRAAGGAACQSGT
VPPHSSALGWSMGLGAVEQGVALVGEVRAAQEPMEGVGGSGMAGCRSRALPRGKAAKARG
SVNGSPLDAKRDLWLTARKWGCQSYNHKVINSANDLNELEKGR

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_7|492_bp
atgaagccgcataccctcgcggtgagtgttacagctcttacagtggcgcatctggagttt
gttccttctgatgttcggatgtgtttggagtttcttccttctgactcagaagcccagctg
gcttcacctagtggatcccgcaccagggctgcaggtggagctgcctgccagtccggcacc
gtgcccccgcactcctcagcccttgggtggtcgatgggactgggcgcagtggagcagggg
gtggcgctcgtcggggaggttcgggcggcacaggagcccatggagggggtgggaggctca
ggcatggcgggctgcaggtcccgagccctgccccgcgggaaggcagctaaggcccgaggg
tctgtaaatggaagtcctctagatgctaagagagacctctggctgacagcaagaaaatgg
ggatgccagtcatacaatcacaaggtaataaattctgccaatgacctgaatgaacttgaa
aaaggacgctga

>gi568815596f:188383429_188694008|GENSCAN_predicted_peptide_8|153_aa
MTAHYIGINEEVNRRDAMDGKYRHMHNGRVSQTSSCESLTGNSNTDAAGVHYPKQINAGT
ENQIPHVLTCKGELNMSIHGHKRGRVDTRAYLRVGGGKKWGWKNYLSEGSKDLLKKGKCG
GLDKEDYAVEGIEYQTETGGRGIKSFEQGDNLG

>gi568815596f:188383429_188694008|GENSCAN_predicted_CDS_8|462_bp
atgactgcgcattatattggcataaacgaagaggtcaatagaagggatgccatggacggt
aaatacaggcacatgcataatgggagagtgtcccagacttcatcctgtgagtcactgacg
ggtaacagcaacacagatgcagctggagttcattatcctaagcaaattaatgcaggaaca
gaaaaccaaatacctcatgttctcacttgtaagggagagctaaacatgagtatacatgga
cacaagaggggaagagtagacaccagggcctacttaagggttgggggtgggaagaagtgg
ggatggaaaaactacctgtcagaaggaagtaaagaccttctgaaaaaagggaagtgtgga
ggactggataaggaggattatgctgtagaaggcattgagtatcagacagagactggagga
aggggtattaaaagctttgagcaaggggataacttaggttaa