Result of FASTA (ccds) for pF1KB7324
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7324, 1279 aa
  1>>>pF1KB7324 1279 - 1279 aa - 1279 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.9069+/-0.000824; mu= 17.3951+/- 0.050
 mean_var=141.9385+/-28.496, 0's: 0 Z-trim(113.2): 29  B-trim: 147 in 1/51
 Lambda= 0.107653
 statistics sampled from 13788 (13817) to 13788 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.424), width:  16
 Scan time:  5.870

The best scores are:                                      opt bits E(32554)
CCDS41580.1 ADGRA1 gene_id:84435|Hs108|chr10       ( 560) 3956 626.4 6.2e-179
CCDS76362.1 ADGRA1 gene_id:84435|Hs108|chr10       ( 463) 3324 528.2 1.9e-149
CCDS33964.1 ADGRA3 gene_id:166647|Hs108|chr4       (1321) 1232 203.7 2.7e-51
CCDS6097.2 ADGRA2 gene_id:25960|Hs108|chr8         (1338)  781 133.6 3.3e-30


>>CCDS41580.1 ADGRA1 gene_id:84435|Hs108|chr10            (560 aa)
 initn: 2866 init1: 2866 opt: 3956  Z-score: 3325.9  bits: 626.4 E(32554): 6.2e-179
Smith-Waterman score: 3956; 99.8% identity (99.8% similar) in 559 aa overlap (722-1279:2-560)

             700       710       720       730       740       750 
pF1KB7 GLVLAGRTRSVASGGKQELSGPLAACIPTQDLKTVLSLPRYPGEFLHPVVYACTAVMLLC
                                     ::::::::::::::::::::::::::::::
CCDS41                              MDLKTVLSLPRYPGEFLHPVVYACTAVMLLC
                                            10        20        30 

             760       770       780       790       800       810 
pF1KB7 LLASFVTYIVHQSAIRISRKGRHTLLNFCFHAALTFTVFAGGINRTKYPILCQAVGIVLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LLASFVTYIVHQSAIRISRKGRHTLLNFCFHAALTFTVFAGGINRTKYPILCQAVGIVLH
              40        50        60        70        80        90 

             820       830       840       850       860       870 
pF1KB7 YSTLSTMLWIGVTARNIYKQVTKKAPLCLDTDQPPYPRQPLLRFYLVSGGVPFIICGVTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YSTLSTMLWIGVTARNIYKQVTKKAPLCLDTDQPPYPRQPLLRFYLVSGGVPFIICGVTA
             100       110       120       130       140       150 

             880        890       900       910       920       930
pF1KB7 ATNIRNYGTEDEDTA-CWMAWEPSLGAFYGPAAIITLVTCVYFLGTYVQLRRHPGRRYEL
       ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ATNIRNYGTEDEDTAYCWMAWEPSLGAFYGPAAIITLVTCVYFLGTYVQLRRHPGRRYEL
             160       170       180       190       200       210 

              940       950       960       970       980       990
pF1KB7 RTQPEEQRRLATPEGGRGIRPGTPPAHDAPGASVLQNEHSFQAQLRAAAFTLFLFTATWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RTQPEEQRRLATPEGGRGIRPGTPPAHDAPGASVLQNEHSFQAQLRAAAFTLFLFTATWA
             220       230       240       250       260       270 

             1000      1010      1020      1030      1040      1050
pF1KB7 FGALAVSQGHFLDMVFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWACCPPRKDAHPAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FGALAVSQGHFLDMVFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWACCPPRKDAHPAL
             280       290       300       310       320       330 

             1060      1070      1080      1090      1100      1110
pF1KB7 DANGAALGRAACLHSPGLGQPRGFAHPPGPCKMTNLQAAQGHASCLSPATPCCAKMHCEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DANGAALGRAACLHSPGLGQPRGFAHPPGPCKMTNLQAAQGHASCLSPATPCCAKMHCEP
             340       350       360       370       380       390 

             1120      1130      1140      1150      1160      1170
pF1KB7 LTADEAHVHLQEEGAFGHDPHLHGCLQGRTKPPYFSRHPAEEPEYAYHIPSSLDGSPRSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LTADEAHVHLQEEGAFGHDPHLHGCLQGRTKPPYFSRHPAEEPEYAYHIPSSLDGSPRSS
             400       410       420       430       440       450 

             1180      1190      1200      1210      1220      1230
pF1KB7 RTDSPPSSLDGPAGTHTLACCTQGDPFPMVTQPEGSDGSPALYSCPTQPGREAALGPGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RTDSPPSSLDGPAGTHTLACCTQGDPFPMVTQPEGSDGSPALYSCPTQPGREAALGPGHL
             460       470       480       490       500       510 

             1240      1250      1260      1270         
pF1KB7 EMLRRTQSLPFGGPSQNGLPKGKLLEGLPFGTDGTGNIRTGPWKNETTV
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EMLRRTQSLPFGGPSQNGLPKGKLLEGLPFGTDGTGNIRTGPWKNETTV
             520       530       540       550       560

>>CCDS76362.1 ADGRA1 gene_id:84435|Hs108|chr10            (463 aa)
 initn: 2866 init1: 2866 opt: 3324  Z-score: 2796.5  bits: 528.2 E(32554): 1.9e-149
Smith-Waterman score: 3324; 99.8% identity (99.8% similar) in 463 aa overlap (818-1279:1-463)

       790       800       810       820       830       840       
pF1KB7 TVFAGGINRTKYPILCQAVGIVLHYSTLSTMLWIGVTARNIYKQVTKKAPLCLDTDQPPY
                                     ::::::::::::::::::::::::::::::
CCDS76                               MLWIGVTARNIYKQVTKKAPLCLDTDQPPY
                                             10        20        30

       850       860       870       880        890       900      
pF1KB7 PRQPLLRFYLVSGGVPFIICGVTAATNIRNYGTEDEDTA-CWMAWEPSLGAFYGPAAIIT
       ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS76 PRQPLLRFYLVSGGVPFIICGVTAATNIRNYGTEDEDTAYCWMAWEPSLGAFYGPAAIIT
               40        50        60        70        80        90

        910       920       930       940       950       960      
pF1KB7 LVTCVYFLGTYVQLRRHPGRRYELRTQPEEQRRLATPEGGRGIRPGTPPAHDAPGASVLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LVTCVYFLGTYVQLRRHPGRRYELRTQPEEQRRLATPEGGRGIRPGTPPAHDAPGASVLQ
              100       110       120       130       140       150

        970       980       990      1000      1010      1020      
pF1KB7 NEHSFQAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMVFSCLYGAFCVTLGLFVLIHHC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 NEHSFQAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMVFSCLYGAFCVTLGLFVLIHHC
              160       170       180       190       200       210

       1030      1040      1050      1060      1070      1080      
pF1KB7 AKREDVWQCWWACCPPRKDAHPALDANGAALGRAACLHSPGLGQPRGFAHPPGPCKMTNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 AKREDVWQCWWACCPPRKDAHPALDANGAALGRAACLHSPGLGQPRGFAHPPGPCKMTNL
              220       230       240       250       260       270

       1090      1100      1110      1120      1130      1140      
pF1KB7 QAAQGHASCLSPATPCCAKMHCEPLTADEAHVHLQEEGAFGHDPHLHGCLQGRTKPPYFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QAAQGHASCLSPATPCCAKMHCEPLTADEAHVHLQEEGAFGHDPHLHGCLQGRTKPPYFS
              280       290       300       310       320       330

       1150      1160      1170      1180      1190      1200      
pF1KB7 RHPAEEPEYAYHIPSSLDGSPRSSRTDSPPSSLDGPAGTHTLACCTQGDPFPMVTQPEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RHPAEEPEYAYHIPSSLDGSPRSSRTDSPPSSLDGPAGTHTLACCTQGDPFPMVTQPEGS
              340       350       360       370       380       390

       1210      1220      1230      1240      1250      1260      
pF1KB7 DGSPALYSCPTQPGREAALGPGHLEMLRRTQSLPFGGPSQNGLPKGKLLEGLPFGTDGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DGSPALYSCPTQPGREAALGPGHLEMLRRTQSLPFGGPSQNGLPKGKLLEGLPFGTDGTG
              400       410       420       430       440       450

       1270         
pF1KB7 NIRTGPWKNETTV
       :::::::::::::
CCDS76 NIRTGPWKNETTV
              460   

>>CCDS33964.1 ADGRA3 gene_id:166647|Hs108|chr4            (1321 aa)
 initn: 1424 init1: 964 opt: 1232  Z-score: 1034.5  bits: 203.7 E(32554): 2.7e-51
Smith-Waterman score: 1433; 43.3% identity (67.1% similar) in 571 aa overlap (736-1279:758-1321)

         710       720       730       740       750       760     
pF1KB7 GKQELSGPLAACIPTQDLKTVLSLPRYPGEFLHPVVYACTAVMLLCLLASFVTYIVHQSA
                                     .::::::. . ..:::::: .:.:: :.: 
CCDS33 NITTIQCYSLSNYAVLMDLTGSELYTQAASLLHPVVYTTAIILLLCLLAVIVSYIYHHSL
       730       740       750       760       770       780       

         770       780       790       800       810       820     
pF1KB7 IRISRKGRHTLLNFCFHAALTFTVFAGGINRTKYPILCQAVGIVLHYSTLSTMLWIGVTA
       :::: :. : :.:.:::  :: .::.:::..:.   .::::::.::::::.:.::.::::
CCDS33 IRISLKSWHMLVNLCFHIFLTCVVFVGGITQTRNASICQAVGIILHYSTLATVLWVGVTA
       790       800       810       820       830       840       

         830       840       850       860       870       880     
pF1KB7 RNIYKQVTKKAPLCLDTDQPPYPRQPLLRFYLVSGGVPFIICGVTAATNIRNYGTEDEDT
       :::::::::::  : : :.:: : .:.:::::..::.:.:.::.:::.::.:::.. .  
CCDS33 RNIYKQVTKKAKRCQDPDEPPPPPRPMLRFYLIGGGIPIIVCGITAAANIKNYGSRPNAP
       850       860       870       880       890       900       

         890       900       910       920       930       940     
pF1KB7 ACWMAWEPSLGAFYGPAAIITLVTCVYFLGTYVQLRRHPGRRYELRTQPEEQRRLATPEG
        ::::::::::::::::..::.:.:.:::. ..::.::: :.:::.   :::.:::. :.
CCDS33 YCWMAWEPSLGAFYGPASFITFVNCMYFLSIFIQLKRHPERKYELKEPTEEQQRLAANEN
       910       920       930       940       950       960       

         950       960       970       980       990      1000     
pF1KB7 GRGIRPGTPPAHDAPGASVLQNEHSFQAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMV
       :. :      . .  ..:.:.:::.:..:: .:..::.:..: : :::::::  . ::.:
CCDS33 GE-INHQDSMSLSLISTSALENEHTFHSQLLGASLTLLLYVALWMFGALAVSLYYPLDLV
        970       980       990      1000      1010      1020      

        1010      1020      1030       1040            1050        
pF1KB7 FSCLYGAFCVTLGLFVLIHHCAKREDVWQCW-WACCPPRK------DAHPALDANGAALG
       :: ..::  .... : ..:::..::::   :  .::: :.      ...:  ..::.   
CCDS33 FSFVFGATSLSFSAFFVVHHCVNREDVRLAWIMTCCPGRSSYSVQVNVQPP-NSNGTNGE
       1030      1040      1050      1060      1070       1080     

     1060      1070           1080        1090       1100      1110
pF1KB7 RAACLHSPGLGQ-----PRGFAHPPGPCKMTNLQAA--QGHASCLS-PATPCCAKMHCEP
          : .: . ..       .: .    ::.::::::  : ::. :   .::   .   : 
CCDS33 APKCPNSSAESSCTNKSASSFKNSSQGCKLTNLQAAAAQCHANSLPLNSTPQLDNSLTEH
        1090      1100      1110      1120      1130      1140     

             1120       1130      1140      1150      1160         
pF1KB7 LTADEAHVHLQE-EGAFGHDPHLHGCLQGRTKPPYFSRHPAEEPEYAYHIPSSLDGSPRS
          .. ..:.   :  :  . :     ..:.:    ::  . . :::: .:.:..:: ..
CCDS33 SMDNDIKMHVAPLEVQFRTNVHSSRHHKNRSKGHRASRLTVLR-EYAYDVPTSVEGSVQN
        1150      1160      1170      1180       1190      1200    

    1170      1180      1190      1200      1210                   
pF1KB7 SRTDSPPSSLDGPAGTHTLACCTQGDPFPMVTQPEGSDGSPALYSCP-----------TQ
       .    : : : .  : :. .  .         .:  .:.: :  . :           : 
CCDS33 GL---PKSRLGNNEG-HSRSRRAYLAYRERQYNPPQQDSSDACSTLPKSSRNFEKPVSTT
            1210       1220      1230      1240      1250      1260

     1220      1230      1240      1250      1260      1270        
pF1KB7 PGREAALGPGHLEMLRRTQSLPFGGPSQNGLPKGKLLEGLPFGTDGTGNIRTGPWKNETT
         ..:   :. .:.  . .:  ..   :::  :..  ::  .:::.:::.::: ::.:::
CCDS33 SKKDALRKPAVVELENQQKSYGLNLAIQNGPIKSNGQEGPLLGTDSTGNVRTGLWKHETT
             1270      1280      1290      1300      1310      1320

        
pF1KB7 V
       :
CCDS33 V
        

>>CCDS6097.2 ADGRA2 gene_id:25960|Hs108|chr8              (1338 aa)
 initn: 1121 init1: 604 opt: 781  Z-score: 655.9  bits: 133.6 E(32554): 3.3e-30
Smith-Waterman score: 1223; 39.5% identity (60.6% similar) in 696 aa overlap (637-1279:681-1338)

        610       620       630       640       650       660      
pF1KB7 TPHCVGKKVPQPVGAADLAPDTSLCRKEGSSASRSCRPGPGHLTRREEDSFRQLAFPRFE
                                     ... .:  : :.::.    :.:. :    :
CCDS60 GRLFHSHSNTSRPGAAGPGKRRGVATPVIFAGTSGC--GVGNLTEPVAVSLRHWA----E
              660       670       680         690       700        

        670         680       690       700       710       720    
pF1KB7 EVTFPPLTA--AERAPSVHGGHSLASQGLVLAGRTRSVASGGKQELSGPLAACIPTQDLK
        .   :..:  ....:.  :: .  :.:  : .   .:..   :.: : .:.      : 
CCDS60 GAE--PVAAWWSQEGPGEAGGWT--SEGCQLRSSQPNVSALHCQHL-GNVAV------LM
            710       720         730       740        750         

          730          740       750       760       770       780 
pF1KB7 TVLSLPRY---PGEFLHPVVYACTAVMLLCLLASFVTYIVHQSAIRISRKGRHTLLNFCF
        . ..::     :  :::::: :::..::::.:...:::...:.::.:::: : :::.::
CCDS60 ELSAFPREVGGAGAGLHPVVYPCTALLLLCLFATIITYILNHSSIRVSRKGWHMLLNLCF
           760       770       780       790       800       810   

             790       800       810       820       830       840 
pF1KB7 HAALTFTVFAGGINRTKYPILCQAVGIVLHYSTLSTMLWIGVTARNIYKQVTKKAPLCLD
       : :.: .::::::. :.: ..::::::.::::.:::.::.:: :: ..:..: .::   .
CCDS60 HIAMTSAVFAGGITLTNYQMVCQAVGITLHYSSLSTLLWMGVKARVLHKELTWRAPPPQE
           820       830       840       850       860       870   

              850       860       870       880       890       900
pF1KB7 TDQPPYPR-QPLLRFYLVSGGVPFIICGVTAATNIRNYGTEDEDTACWMAWEPSLGAFYG
        : :  :  .:.:::::..::.:.::::.:::.::.::  .:..  ::..:.::::::: 
CCDS60 GD-PALPTPSPMLRFYLIAGGIPLIICGITAAVNIHNY--RDHSPYCWLVWRPSLGAFYI
            880       890       900       910         920       930

              910       920             930            940         
pF1KB7 PAAIITLVTCVYFLGTYVQLR----RHP--GRRYELRTQPEEQR-----RLATP---EGG
       :.:.: :.: .::: . ..::    ..:  :         :: :     : . :   ..:
CCDS60 PVALILLITWIYFLCAGLRLRGPLAQNPKAGNSRASLEAGEELRGSTRLRGSGPLLSDSG
              940       950       960       970       980       990

             950        960       970       980       990      1000
pF1KB7 R-----GIRPGTP-PAHDAPGASVLQNEHSFQAQLRAAAFTLFLFTATWAFGALAVSQGH
             . : ::: : .:  : :.    .:  .:: : . : ::. : :: :::::::  
CCDS60 SLLATGSARVGTPGPPED--GDSL----YSPGVQLGALVTTHFLYLAMWACGALAVSQRW
             1000        1010          1020      1030      1040    

             1010      1020      1030      1040      1050      1060
pF1KB7 FLDMVFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWACCPPRKDAHPALDANGAALGRA
       .  .: :::::.   .:::::. ::::.:.::   : ::::: . : :   :   ::  :
CCDS60 LPRVVCSCLYGVAASALGLFVFTHHCARRRDVRASWRACCPPASPAAP--HAPPRALPAA
         1050      1060      1070      1080      1090        1100  

             1070                 1080      1090      1100         
pF1KB7 ACLHSPGLGQ--------PRGFAHPP---GPCKMTNLQAAQGHASCLSPATPCCAKMHCE
       :   :: .:.        : : .  :   ::::.:::: ::... : . :.   :  . :
CCDS60 AEDGSPVFGEGPPSLKSSPSGSSGHPLALGPCKLTNLQLAQSQV-CEAGAA---AGGEGE
           1110      1120      1130      1140       1150           

    1110          1120        1130      1140      1150      1160   
pF1KB7 PLTA----DEAHVHLQE--EGAFGHDPHLHGCLQGRTKPPYFSRHPAEEPEYAYHIPSSL
       :  :    . :: : ..  .:  .:  . .:   :..      .        : .. :: 
CCDS60 PEPAGTRGNLAHRHPNNVHHGRRAHKSRAKGHRAGEACGKNRLKALRGGAAGALELLSSE
     1160      1170      1180      1190      1200      1210        

          1170       1180      1190      1200      1210      1220  
pF1KB7 DGSPRSSRTDSP-PSSLDGPAGTHTLACCTQGDPFPMVTQPEGSDGSPALYSCPTQPG--
       .:: ..: :::   :: ..:..   :    .:.:  :.:  :::: : :  :   . :  
CCDS60 SGSLHNSPTDSYLGSSRNSPGAGLQL----EGEP--MLTPSEGSDTSAAPLSEAGRAGQR
     1220      1230      1240            1250      1260      1270  

                 1230      1240      1250      1260         1270   
pF1KB7 ----REAALGPGHLEMLRRTQSLPFGGPSQNGLPKGKLLEGLPF-GTD--GTGNIRTGPW
           :..  : : ::   . .: :... : :: :::   . . . :..  . : ..:: :
CCDS60 RSASRDSLKGGGALEKESHRRSYPLNAASLNGAPKGGKYDDVTLMGAEVASGGCMKTGLW
           1280      1290      1300      1310      1320      1330  

             
pF1KB7 KNETTV
       :.::::
CCDS60 KSETTV
             




1279 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 08:40:11 2016 done: Sat Nov  5 08:40:12 2016
 Total Scan time:  5.870 Total Display time:  0.110

Function used was FASTA [36.3.4 Apr, 2011]
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