GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:50:43

Sequence gi568815596f:156376106_156682915 : 306810 bp : 38.02% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    305    300    6                               1.05
 1.01 Sngl -  24455  24000  456  2  0   56   42   247 0.567  10.90
 1.00 Prom -  54117  54078   40                              -4.45

 2.04 PlyA -  55299  55294    6                               1.05
 2.03 Term -  59910  59625  286  2  1   10   47   206 0.857   2.59
 2.02 Intr -  60807  60478  330  2  0  104   40   175 0.828   8.12
 2.01 Init -  68170  68103   68  1  2   32   90    59 0.641   1.10
 2.00 Prom -  68721  68682   40                              -5.35

 3.00 Prom +  78815  78854   40                              -3.75
 3.01 Init + 100001 100102  102  1  0   53  108    60 0.127   4.79
 3.02 Intr + 119939 120110  172  1  1   42  107   244 0.526  20.29
 3.03 Intr + 131889 132014  126  1  0   94   89     3 0.444   0.73
 3.04 Intr + 134691 134815  125  1  2   66   91   121 0.962   9.58
 3.05 Intr + 136115 136212   98  1  2  102   82    38 0.865   2.49
 3.06 Intr + 137228 137391  164  2  2   65   92    86 0.728   5.40
 3.07 Term + 138468 138481   14  1  2  104   46   -15 0.157  -6.71
 3.08 PlyA + 140211 140216    6                               1.05

 4.03 PlyA - 141049 141044    6                               1.05
 4.02 Term - 150935 150914   22  1  1  120   42    11 0.296  -3.49
 4.01 Init - 154586 152992 1595  2  2   42   53   357 0.411  19.54
 4.00 Prom - 155133 155094   40                              -6.15

 5.00 Prom + 155377 155416   40                              -7.65
 5.01 Init + 157703 157759   57  1  0  102   84    31 0.565   5.51
 5.02 Intr + 164158 164263  106  0  1   89   37   102 0.186   4.07
 5.03 Intr + 173503 173667  165  2  0  120   85   185 0.714  20.41
 5.04 Intr + 174497 174641  145  0  1   98   91   219 0.981  21.62
 5.05 Intr + 181284 181477  194  0  2   73   88   154 0.953  12.11
 5.06 Intr + 192720 192854  135  1  0   71   80   150 0.993  12.12
 5.07 Intr + 193258 193433  176  2  2  110  105   156 0.999  18.24
 5.08 Intr + 193982 194113  132  1  0   59   87   158 0.988  12.72
 5.09 Intr + 195029 195187  159  1  0   72   67   143 0.997   9.86
 5.10 Intr + 202784 202896  113  1  2   87   80    67 0.995   4.06
 5.11 Intr + 202981 203059   79  1  1   89   76   106 0.999   8.13
 5.12 Intr + 203585 203683   99  1  0   77  109    81 0.992   8.49
 5.13 Intr + 206688 206809  122  2  2   67   68    80 0.188   2.27
 5.14 Intr + 241055 241125   71  2  2   65  101    78 0.164   4.71
 5.15 Intr + 241336 241398   63  2  0   46   44   126 0.469   1.77
 5.16 Intr + 241844 242119  276  0  0   -4   77   173 0.244   3.57
 5.17 Term + 243195 243379  185  1  2   63   43   139 0.156   3.62
 5.18 PlyA + 245141 245146    6                               1.05

 6.04 PlyA - 247096 247091    6                               1.05
 6.03 Term - 250551 250382  170  1  2  -28   48   192 0.023   0.66
 6.02 Intr - 254318 254219  100  2  1   58   53    76 0.003  -0.14
 6.01 Init - 269152 269036  117  1  0   54  101    89 0.725   7.09
 6.00 Prom - 270372 270333   40                              -2.75

 7.04 PlyA - 270526 270521    6                               1.05
 7.03 Term - 272464 272431   34  0  1   92   47    62 0.036  -1.42
 7.02 Intr - 288011 287775  237  1  0   43  115    81 0.399   2.11
 7.01 Init - 290140 289791  350  1  2   67   99   102 0.519   5.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  92424  92242  183  0  0   63   47   162 0.819   6.16
S.002 Intr + 173243 173321   79  1  1   72   76    55 0.847   0.91
S.003 Term - 273986 273802  185  0  2   16   50   179 0.894   3.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_1|151_aa
MKPHSRALLLDVGSLGSWRDPVPCAATAAGLPGAQCLPELAPPQAYCAGSADPGGRGVSG
LWLCCRVEPRSKPRARAQRSGRAASVASGAHGDWFMEQKGGDLLFAHENVMDLPEHSSPP
KINAHLRKTTCSHQIPIPCLCKGYSQITPCR

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_1|456_bp
atgaagcctcactccagagcacttctgctggacgtcgggagcctgggatcctggagggat
ccggtgccctgcgcggccacagcggcgggactcccgggtgcccaatgcctgccggagctg
gcacctccccaggcttattgcgcaggcagcgcagatccaggaggccgtggtgtgtccggc
ctctggctttgctgccgggtagaaccccggtccaaacctcgagcccgggcccagcgctcg
ggccgcgccgcgagcgtcgcctcgggtgctcatggagactggttcatggagcagaaaggt
ggagaccttctctttgcacacgaaaatgttatggatttacctgaacactcttcacccccg
aaaataaatgcacatctcaggaaaaccacgtgttcacaccaaatccccataccttgctta
tgtaagggttacagccagataaccccttgcagataa

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_2|227_aa
MWQPLDVNAIPGEAESKETPNSRTVTRQQLSFSKKPQPSSRLVLTLASEGSNNPYQTSRI
YKLKVCMNFQWGTNPRPKSPATLLFYKCRLQNINNETLEKSESIFCWWEEILNLSRFPPP
PTAKTGVPEHSPGSCFVPRRCRTPDLRPALPAGWRTGKPELGQAGEDGGGVRFPVPSPMR
AALAICLRERRHSSAGTLAGLAYLTTSRCPPWDLASPTLYLPAGRLP

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_2|684_bp
atgtggcagcctctagatgtgaatgctatacctggagaggctgagagcaaggaaacccca
aactccaggacggtcacacgccagcagctgagtttctcaaagaagcctcagccctcctcc
agactcgttctcactcttgcttcggaagggagcaacaatccttatcagactagccgcatc
tacaagctaaaagtttgcatgaactttcaatggggtaccaaccctcgccccaaaagtcct
gccactttactattttacaaatgccgcctccaaaacataaacaacgaaaccctagagaag
agcgaatccatcttctgctggtgggaagaaattctaaatctttcccgtttcccgccacca
cctaccgccaagactggagtcccagaacactcgcccggttcctgctttgtgcctcggcga
tgccggactccagacctccgccccgccttgccagcgggctggcggactggaaagcctgag
ctaggccaggctggggaagacggtggcggtgtccgatttcctgtgccctcgcccatgcgg
gccgccctggccatctgcctgcgggagaggagacactcgtccgccggcacgctggcgggg
ctggcttacctgacgacttctcgttgtccgccctgggatctggcttctcctactctgtac
ctcccggccggcaggcttccctag

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_3|266_aa
MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ
LLTLQNTSEFDILVIGGGATGSGCALDAVTRGTRKTPISPILAIVNLHTGNCVTTKLSPK
LGGVKQQLSSASFRLKTALVERDDFSSGTSSRSTKLIHGGVRYLQKAIMKLDIEQYRMVK
EALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLYDLVAGSNCLKSSYVLSKS
RALEHFPMLQKDKLVGAIVYYDVLHF

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_3|801_bp
atggcatttcaaaaggcagtgaaagggacgattcttgttggaggaggtgctcttgcaact
gttttaggactttctcagtttgctcattacagaaggaaacaaatgaacctggcctatgtt
aaagcagcagactgcatttcagaaccagttaacagggagcctccttccagagaagctcag
ctactgactttgcaaaacacatctgaatttgatatccttgttattggaggaggagcaaca
ggaagtggctgtgcgctagatgctgtcaccagaggtacaaggaaaactcccatctctccc
atcttggctatagttaatcttcacacagggaattgtgtcactacaaaactatccccaaaa
cttggtggcgtaaaacaacaattatcatcagccagtttcagactaaaaacagcccttgta
gaaagagatgatttctcatcagggaccagcagcagaagcactaaattgatccatggtggt
gtgagatatctgcagaaggccatcatgaagttggatattgagcagtataggatggtaaaa
gaagcccttcatgagcgtgccaacctgctagaaattgctccccatttatcagctccattg
cctataatgcttccagtttacaagtggtggcagttaccttactactgggtaggaatcaag
ctgtatgatttggttgcaggaagcaattgcctaaaaagcagttatgtcctcagcaaatca
agagcccttgaacatttcccaatgctccagaaggacaaactggtaggagcaattgtctac
tatgacgtgttacatttctga

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_4|538_aa
MIISIDAEKAFDKIQQRFMLKTLNKLGIDGTYFKIIRAIHDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYPENPIVS
AQNLLKLISKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDV
KDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPITFF
TELENSTLKFIWNQKRAHIAKAILSQKNKAGGITLPDFKLYYKATVTKTAWYWYENRDID
QWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTAYT
KINSRWIKDLNVRIKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKDKIDKWDLIKLK
SFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKEMN
RHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRYLGKDS

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_4|1617_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgcta
aaaactctcaataaattaggtattgatggaacgtatttcaaaataataagagctatccat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattagacaggagaaagaaataaagggtattcagttaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgatcgtatatccagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaaagtctcaggatacaaaatcaatgtacaaaaa
tcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactc
ccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtg
aaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaac
aaatggaagaacattccatgctcatgggtaggaagaatcaatatagtgaaaatggccata
ctgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatcactttcttc
acagaattggaaaatagtactttaaagttcatatggaaccaaaaaagagcccacatcgcc
aaggcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaacta
tactacaaggctacagtaaccaaaacagcatggtactggtacgaaaacagagatatagat
caatggaacagaacagagccctcagaaataacgccacatatctacaactatctgatcttt
gacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgg
gaaaactggctagccatatgtagaaagctgaaactggatcccttccttacagcttataca
aaaatcaattcaagatggattaaagacttaaacgttagaattaaaaccataaaaacccta
gaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgtctaaa
acaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaag
agcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggag
aaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactc
aaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggaaatgaac
agacacttctcaaaagaagacatttatgcagccaaaaaacatatgaaaaaatgctcacca
tcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtt
agaatggcaatcattaaaaagtcaggaaacaacaggtatctgggcaaagactcctga

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_5|758_aa
MLKPLMGGGAHRRAAAGARKWDGTAIIASTSGLEVLWVTTSRSKTVESVGLAKPGQHNDA
RMNLAIALTAARYGAATANYMEVVSLLKKTDPQTGKVRVSGARCKDVLTGQEFDVRAKCV
INATGPFTDSVRKMDDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPW
QKMTIAGTTDTPTDVTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVT
DPKSADTQSISRNHVVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVG
LFLQGGKDWSPTLYIRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRL
VSEFPYIEAEVKYGIKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDY
KKQEQLETARKFLYYEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIV
DVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMK
TAEENLDRRVPIPVDRSCGGLYFCVRNWWVLGLTDFKNEAADPSGVKLQTFTVSVTARKG
SVDPKNSGAQLASPSGSRTGAAGGAACQSRALRLHSSALGWSMGLGAVEHGAVLIGEARA
AQEPMEGVGGSGMAGCRSQVLPRGKAAKTPRNHLRFLGAASSQLLKLKMLTSAKIYFFIP
VSSAKIDYTIQGFSLNANTQGLCTDLADTSSVHAALEV

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_5|2277_bp
atgctcaaaccccttatgggagggggagcacacagaagggcagctgcaggagccaggaaa
tgggatggtactgctatcattgcatctacctctggattagaggttctttgggtcactacc
tctagatcgaagactgttgagagcgtcggactggcaaagccaggacaacataacgatgca
cggatgaaccttgccattgctctgactgctgccaggtatggggctgccacagccaattac
atggaggtagtgagcttgctcaagaagacagacccccagacagggaaagtgcgtgtgagc
ggcgcacggtgcaaggatgtcctcacagggcaggaatttgacgtgagagccaaatgtgtt
atcaatgccacgggacctttcacggactctgtgcgcaaaatggatgataaagacgcagca
gctatctgccagccaagtgctggtgtccatattgtgatgcctggttattacagcccagag
agcatgggacttcttgacccagcgaccagtgatgggcgagttattttcttcttaccctgg
caaaagatgacgatcgctggcactactgatactccaactgatgttacacaccatccaatt
ccttcagaagaagatatcaacttcattttgaatgaagtgcgtaattacctgagttgtgat
gttgaagtgagaagaggggatgtcctggcagcatggagtggaatccgtcctcttgttaca
gaccccaaatctgcagatactcagtctatctcccgaaatcatgttgttgatatcagtgag
agtggccttattactatagcaggtggaaagtggacaacttatcggtctatggcagaagat
accataaatgctgctgtcaaaactcataatttaaaagcaggaccaagtagaacagttggg
cttttccttcaagggggtaaagattggagccccacactctacattaggcttgtgcaggat
tatggacttgaaagcgaggtggcacagcatcttgccgccacctatggtgataaggccttt
gaggtggccaaaatggcaagtgtgactggcaaaaggtggcctattgttggagtacgtctt
gtgtcagaatttccatatattgaagcagaggtgaaatatgggattaaggagtatgcctgc
actgctgtggatatgatttcacgtcgtactcgcctggcctttctaaatgtccaggcagca
gaggaagccctacccaggattgttgaactgatgggcagggaactgaattgggatgattat
aagaagcaggaacaacttgaaacagccaggaagtttctatattatgaaatgggctataaa
tctcgatcagaacagttaacagatcgctctgaaattagcctactgccttcagacattgac
aggtataagaagagatttcataagtttgatgcagaccagaaaggctttattaccattgtt
gatgttcagcgtgtattagagagtatcaatgtccaaatggatgaaaatacactccatgaa
attctaaatgaagttgatttgaataaaaatggacaggttgaactcaatgaatttttgcag
ctgatgagtgctattcaaaaaggaagggtatctggaagccggcttgctatactaatgaaa
actgcagaagagaacctcgacagaagagttccaattccagtggaccgtagttgtggagga
ttgtatttctgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaagcc
gcggaccctagcggagtgaagctgcagaccttcacggtgagtgttacagctcgtaaaggc
agtgtggacccaaagaactcaggagcccagttggcttcacccagtggatcccgcactggg
gctgcaggtggagctgcctgccagtcccgcgccctgcgcctgcactcctcagcccttggg
tggtcgatgggactgggcgccgtggagcacggggcagtgctcatcggggaggctcgggcg
gcacaggagcccatggagggggtgggaggctcaggcatggcgggctgcaggtcccaagtc
ctgccccgcgggaaggcagctaagacaccgagaaatcacctaagatttcttggagctgcc
tcctctcagctcctcaaactaaaaatgcttacatcggccaaaatctatttcttcatccca
gttagttcagcaaagatagactatactattcaaggcttcagtctcaatgccaatacacaa
gggctctgcacagaccttgcagatacctcatctgtgcacgcagctttagaggtatga

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_6|128_aa
MGSRKRCLAGSGAQRTSCQIRRDGSQWWVCDGGKQQWWMLLGFTNSSISYPYYGLTAEAQ
QQETQRLTESNYRSCDKVICGFGFRVALAEPQELKTERWGKVMHKETSAIVTVEINVKSS
VKATGHIP

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_6|387_bp
atggggagccgcaaaaggtgcctcgctggatcaggagcacagaggacatcctgccagatc
cggagggatgggagtcagtggtgggtctgcgatggtggcaaacagcagtggtggatgtta
ctgggttttactaattcttctatttcttacccctattatggtctaacagcagaagctcaa
caacaagaaacacaacgactgactgaatcaaattacagatcatgtgacaaggtgatatgt
ggctttggcttcagagtggctttagcagaaccccaggaattgaaaactgagagatggggc
aaggttatgcacaaagaaacatcagccatcgtgactgtggagatcaatgtgaaaagcagt
gtcaaggccacaggtcacattccttga

>gi568815596f:156376106_156682915|GENSCAN_predicted_peptide_7|206_aa
MSKHHKIQKIKNKINATCLSEWLKFKTLTVSNAGKTVVQQESIHQWKRKILQPLWKIIWQ
FLIKLNISLSYEPPIKLPGIYLNELKICVYTKTCIRIYNNLIQNCQKLEATKMSFDSKEG
CPKSPLGMIKWEWEGSLYQDSPCSQKTLSAELSLLTKPKRKVKALFLFTHPSNTDVAIQL
LNKPVVLHICTVLIGRNCIPKAPVDA

>gi568815596f:156376106_156682915|GENSCAN_predicted_CDS_7|621_bp
atgtcaaagcatcataaaatacagaaaataaaaaacaaaattaatgcaacatgcctatca
gaatggctaaaattcaaaacactgacagtatcaaatgctggcaagactgtggtgcaacag
gaatctattcatcagtggaaacgcaaaattttacagccactttggaagataatttggcag
tttcttataaagctaaacataagcttatcttatgaaccaccaatcaagctgccaggtatt
tacctaaatgagttgaaaatttgtgtttatacaaaaacctgcatacgaatttataataac
cttattcaaaattgccaaaaactggaagcaaccaagatgtccttcgacagcaaggaaggc
tgtcccaaatctccacttggaatgatcaaatgggaatgggagggttctctctatcaggac
tccccttgttctcagaaaacactatcagctgagctgtcattactaacaaaacccaaaagg
aaagtgaaagctttgtttctctttacccacccctccaacactgacgtagctattcagttg
ttaaataaacctgttgtgttgcacatctgcactgtgctgataggaaggaactgcattcca
aaagccccagtggatgcctga