Result of FASTA (omim) for pF1KB6769
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6769, 116 aa
  1>>>pF1KB6769 116 - 116 aa - 116 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9474+/-0.000244; mu= 13.3238+/- 0.015
 mean_var=73.3892+/-15.001, 0's: 0 Z-trim(122.8): 15  B-trim: 430 in 1/50
 Lambda= 0.149713
 statistics sampled from 41394 (41419) to 41394 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.842), E-opt: 0.2 (0.486), width:  16
 Scan time:  4.100

The best scores are:                                      opt bits E(85289)
XP_016862102 (OMIM: 601665,605353) PREDICTED: appe ( 116)  790 178.3 2.5e-45
NP_001289752 (OMIM: 601665,605353) appetite-regula ( 116)  790 178.3 2.5e-45
NP_001128413 (OMIM: 601665,605353) appetite-regula ( 116)  790 178.3 2.5e-45
NP_001289751 (OMIM: 601665,605353) appetite-regula ( 117)  778 175.7 1.5e-44
NP_001289750 (OMIM: 601665,605353) appetite-regula ( 117)  778 175.7 1.5e-44
NP_001289753 (OMIM: 601665,605353) appetite-regula ( 117)  778 175.7 1.5e-44
XP_016862101 (OMIM: 601665,605353) PREDICTED: appe ( 117)  778 175.7 1.5e-44
NP_057446 (OMIM: 601665,605353) appetite-regulatin ( 117)  778 175.7 1.5e-44
NP_001289754 (OMIM: 601665,605353) appetite-regula ( 117)  778 175.7 1.5e-44
NP_001128417 (OMIM: 601665,605353) appetite-regula ( 104)  567 130.1 7.3e-31
NP_001128416 (OMIM: 601665,605353) appetite-regula ( 105)  555 127.5 4.4e-30
NP_001128418 (OMIM: 601665,605353) appetite-regula (  66)  290 70.1 5.3e-13


>>XP_016862102 (OMIM: 601665,605353) PREDICTED: appetite  (116 aa)
 initn: 790 init1: 790 opt: 790  Z-score: 934.8  bits: 178.3 E(85289): 2.5e-45
Smith-Waterman score: 790; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116)

               10        20        30        40        50        60
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
               10        20        30        40        50        60

               70        80        90       100       110      
pF1KB6 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110      

>>NP_001289752 (OMIM: 601665,605353) appetite-regulating  (116 aa)
 initn: 790 init1: 790 opt: 790  Z-score: 934.8  bits: 178.3 E(85289): 2.5e-45
Smith-Waterman score: 790; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116)

               10        20        30        40        50        60
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
               10        20        30        40        50        60

               70        80        90       100       110      
pF1KB6 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110      

>>NP_001128413 (OMIM: 601665,605353) appetite-regulating  (116 aa)
 initn: 790 init1: 790 opt: 790  Z-score: 934.8  bits: 178.3 E(85289): 2.5e-45
Smith-Waterman score: 790; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116)

               10        20        30        40        50        60
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
               10        20        30        40        50        60

               70        80        90       100       110      
pF1KB6 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110      

>>NP_001289751 (OMIM: 601665,605353) appetite-regulating  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>NP_001289750 (OMIM: 601665,605353) appetite-regulating  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>NP_001289753 (OMIM: 601665,605353) appetite-regulating  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>XP_016862101 (OMIM: 601665,605353) PREDICTED: appetite  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
XP_016 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>NP_057446 (OMIM: 601665,605353) appetite-regulating ho  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_057 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>NP_001289754 (OMIM: 601665,605353) appetite-regulating  (117 aa)
 initn: 551 init1: 551 opt: 778  Z-score: 920.7  bits: 175.7 E(85289): 1.5e-44
Smith-Waterman score: 778; 99.1% identity (99.1% similar) in 117 aa overlap (1-116:1-117)

               10        20        30         40        50         
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQ-RKESKKPPAKLQPRALAGWLRPE
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQQRKESKKPPAKLQPRALAGWLRPE
               10        20        30        40        50        60

      60        70        80        90       100       110      
pF1KB6 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
               70        80        90       100       110       

>>NP_001128417 (OMIM: 601665,605353) appetite-regulating  (104 aa)
 initn: 567 init1: 567 opt: 567  Z-score: 675.1  bits: 130.1 E(85289): 7.3e-31
Smith-Waterman score: 567; 97.7% identity (98.8% similar) in 86 aa overlap (31-116:19-104)

               10        20        30        40        50        60
pF1KB6 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPED
                                     : .:::::::::::::::::::::::::::
NP_001             MFTCWWSYLRSTLAAVPGEASRVQRKESKKPPAKLQPRALAGWLRPED
                           10        20        30        40        

               70        80        90       100       110      
pF1KB6 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQAEGAEDELEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK
       50        60        70        80        90       100    




116 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:54:32 2016 done: Fri Nov  4 23:54:33 2016
 Total Scan time:  4.100 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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