GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:52:07

Sequence gi568815595f:16075152_16327497 : 252346 bp : 43.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    488    483    6                               1.05
 1.02 Term -   2524   2409  116  2  2   78   49    85 0.595   2.33
 1.01 Init -   7254   7131  124  0  1   59   55   136 0.367   7.73
 1.00 Prom -   9965   9926   40                              -4.96

 2.06 PlyA -  10776  10771    6                               1.05
 2.05 Term -  16662  16525  138  0  0   41   52   148 0.293   4.46
 2.04 Intr -  22703  22557  147  2  0   40   86   105 0.535   5.93
 2.03 Intr -  34900  34874   27  1  0   77   96    37 0.034   1.71
 2.02 Intr -  50329  50187  143  2  2   77   48    59 0.441   0.87
 2.01 Init -  53514  53436   79  0  1  115   60    49 0.786   6.12
 2.00 Prom -  54508  54469   40                              -2.46

 3.02 PlyA -  55908  55903    6                               1.05
 3.01 Sngl -  76393  76145  249  1  0   92   54   144 0.949   6.48
 3.00 Prom -  84206  84167   40                              -2.46

 4.02 PlyA -  84970  84965    6                               1.05
 4.01 Sngl -  87307  86282 1026  1  0   49   43   394 0.995  28.09
 4.00 Prom -  87400  87361   40                              -4.96

 5.00 Prom +  92675  92714   40                              -5.26
 5.01 Init + 100001 100539  539  1  2   82   93   433 0.841  35.54
 5.02 Intr + 108382 108420   39  1  0   68  121    15 0.064   0.14
 5.03 Intr + 120609 120775  167  0  2  140   63   272 0.393  29.50
 5.04 Intr + 125468 125672  205  0  1   93   93   144 0.633  13.66
 5.05 Intr + 133352 133519  168  2  0   57  109   137 0.951  11.76
 5.06 Intr + 135973 136090  118  1  1   88   95    78 0.521   8.97
 5.07 Intr + 137418 137612  195  2  0   91  116    85 0.524  11.21
 5.08 Intr + 144759 144863  105  2  0   91   94    69 0.995   8.21
 5.09 Intr + 147464 147607  144  1  0   75  105   124 0.955  13.28
 5.10 Term + 152203 152349  147  0  0  122   42   165 0.999  13.20
 5.11 PlyA + 153866 153871    6                               1.05

 6.00 Prom + 157484 157523   40                              -2.06
 6.01 Init + 168119 168224  106  1  1   79   71    85 0.574   6.28
 6.02 Term + 176445 176557  113  1  2   99   54    41 0.207   0.52
 6.03 PlyA + 176976 176981    6                               1.05

 7.04 PlyA - 177003 176998    6                               1.05
 7.03 Term - 177351 177218  134  1  2  112   41    65 0.287   2.45
 7.02 Intr - 184715 184640   76  2  1   49   98     9 0.054  -2.91
 7.01 Init - 189725 189618  108  2  0   85   88   167 0.652  16.62
 7.00 Prom - 195107 195068   40                              -0.46

 8.08 PlyA - 196458 196453    6                               1.05
 8.07 Term - 208546 208436  111  1  0  100   42    55 0.081   0.66
 8.06 Intr - 220948 220887   62  2  2   97   87    28 0.006   2.05
 8.05 Intr - 229963 229941   23  0  2   73  119   -15 0.004  -2.71
 8.04 Intr - 240507 240474   34  1  1   80  111    48 0.228   3.58
 8.03 Intr - 242081 241697  385  2  1   68   60   251 0.138  14.72
 8.02 Intr - 248306 248225   82  1  1   66  116    27 0.610   2.94
 8.01 Intr - 251725 251622  104  1  2  101   92   177 0.943  18.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 103536 103761  226  0  1   67   46   148 0.852   4.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_1|79_aa
MWESLELPRDLLNGFNQNADNEVQVEVVSDEDEELVGNWSKGGLVVSLTSGMKPQTLTVS
VTAHKGSADPKSEQQQDLS

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_1|240_bp
atgtgggaaagtttggaacttcctagagacttgttgaatggctttaaccaaaatgctgac
aatgaagtccaggttgaggtggtctcagatgaagatgaggaacttgttgggaactggagc
aaaggtgggctcgtggtctcgctgacttcaggaatgaagccgcagaccctcacagtgagt
gttacagctcataaaggtagcgcagacccaaagagtgagcagcaacaagatttatcatga

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_2|177_aa
MDELMPEYRWGQARASFLNAIEVSDIGIYTLTPAGTFQNAADSPDHSPALGYTIGLLEFT
TVLNTRALTLYPPKMTLENAVRRAPPPNIITLRVRISTYEFEGDTNSQSIVKMKKKEEKA
QVEQERRKREEKPLEFQTNHQQANSHPAMGTRVSAASQRPPGESKQYRCTLPGLVLV

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_2|534_bp
atggatgagttgatgcctgagtatcgatgggggcaagccagagcgtccttcctaaacgct
atcgaagtctctgacataggtatatacaccctcacaccagcaggtaccttccaaaatgct
gcagactccccagaccacagtcctgctcttggatacaccattggccttttggagttcacc
acagttctgaatactcgggctctaactctgtaccctcccaagatgactctggagaatgct
gtacggagggcaccccctccaaatatcatcacactgagggttaggatttcaacatatgaa
tttgaaggggatacaaacagtcagtccattgtgaaaatgaagaagaaagaagaaaaagca
caagtggaacaagagaggaggaagagggaagagaagccactagaattccagaccaaccat
cagcaggccaactcccatccagccatgggaaccagggtgtcagcagcttcccaacgacca
ccaggtgagtccaagcagtatcgctgcacactccctggcctggtgttggtgtga

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_3|82_aa
MDTEWRDQEQVGIHRYKVEPHKDELKPVSFLVASDVGGLGVLEKLGPSVIELNIDGWPRK
RKLKEDPGEDKALAGPAVASCQ

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_3|249_bp
atggacacagagtggagagatcaagaacaagttggaatccataggtacaaggtggagccc
cacaaagatgaattaaaacccgtgtcttttcttgttgcctctgatgtaggtggtttgggt
gtcttggagaagctggggccttctgtcatagagctaaacatagatggctggcccagaaag
cggaaactgaaggaggatccaggagaagataaagcacttgcaggcccagcagtggcttcc
tgccaatga

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_4|341_aa
MGDFNTPLSTLERSTRQEVNKDIQDLNSALQQADLTDIYRTLQPKSTEYTFFSAPHRTYS
KIDHIVGSKALLSKRKRTEIITNCLSDHSAIKLEFKIKKLTQNRLTIWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKARCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETPKTLQKINESRSWFLEKINKIDRLLARLIK
KKREKNQIDAIKNDKGDVTTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEAESLNRPITGSEIEAIIKSLPIKKSPRSDGFTAEFYQR

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_4|1026_bp
atgggagactttaacaccccactgtcaacattagagagatccacgagacaggaagttaac
aaggatatccaggacttgaactcagctctgcaacaagcagacctaacagacatctacaga
actctccaacccaaatcaacagaatatacattcttctcagcaccacatcgcacttattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaacgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaattcaagattaagaaactc
actcaaaaccgcttaactatatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacatttaaggcaaggtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagccagcagaaggcaagaaataactaag
atcagagcagaactgaaggagatagagacaccaaaaacccttcaaaaaatcaatgaatcc
aggagctggtttttagaaaagattaacaaaattgatagactgctagcaagactaataaag
aagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatgtcaccacc
gatcccacagagatacaaactaccatcagagaatactataaacacctctatgcaaataaa
ctagaaaatctagaagaaatggataaattcctggacacatacaccctcccaagactaaac
caggaagaagctgagtccctgaatagaccaataacaggctctgaaattgaggcaataatt
aagagcctaccaatcaaaaaaagtccaagatcagacggattcacagctgaattctaccag
aggtag

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_5|608_aa
MLLRKRYRHRPCRLQFLLLLLMLGCVLMMVAMLHPPHHTLHQTVTAQASKHSPEARYRLD
FGESQDWVLEAEDEGEEYSPLEGLPPFISLREDQLLVAVALPQARRNQSQGRRGGSYRLI
KQPRRQDKEAPKRDWGADEDGEVSEEEELTPFSLDPRGLQEALSARIPLQRALPEVRHPL
EQIAIEQLSEVRRCLQQHPQDSLPTASVILCFHDEAWSTLLRTVHSILDTVPRAFLKEII
LVDDLSQQGQLKSALSEYVARLEGVKLLRSNKRLGAIRARMLGATRATGDVLVFMDAHCE
CHPGWLEPLLSRIAGDRSRVVSPVIDVIDWKTFQYYPSKDLQRGVLDWKLDFHWEPLPEH
VRKALQSPISPIRSPVVPGEVVAMDRHYFQNTGAYDSLMSLRGGENLELSFKAWLCGGSV
EILPCSRVGHIYQNQDSHSPLDQEATLRNRVRIAETWLGSFKETFYKHSPEAFSLSKLHN
TGLGLCADCQAEGDILGCPMVLAPCSDSRQQQYLQHTSRKEIHFGSPQHLCFAVRQEQVI
LQNCTEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRPCDGKARQQWRFD
QINAVDER

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_5|1827_bp
atgctcctaaggaagcgatacaggcacagaccatgcagactccagttcctcctgctgctc
ctgatgctgggatgcgtcctgatgatggtggcgatgttgcaccctccccaccacaccctg
caccagactgtcacagcccaagccagcaagcacagccctgaagccaggtaccgcctggac
tttggggaatcccaggattgggtactggaagctgaggatgagggtgaagagtacagccct
ctggagggcctgccaccctttatctcactgcgggaggatcagctgctggtggccgtggcc
ttaccccaggccagaaggaaccagagccagggcaggagaggtgggagctaccgcctcatc
aagcagccaaggaggcaggataaggaagccccaaagagggactggggggctgatgaggac
ggggaggtgtctgaagaagaggagttgaccccgttcagcctggacccacgtggcctccag
gaggcactcagtgcccgcatccccctccagagggctctgcccgaggtgcggcacccactt
gaacaaatagctattgaacaactatcagaagtaagaaggtgtctgcagcagcaccctcag
gacagcctgcccacagccagcgtcatcctctgtttccatgatgaggcctggtccactctc
ctgcggactgtacacagcatcctcgacacagtgcccagggccttcctgaaggagatcatc
ctcgtggacgacctcagccagcaaggacaactcaagtctgctctcagcgaatatgtggcc
aggctggagggggtgaagttactcaggagcaacaagaggctgggtgccatcagggcccgg
atgctgggggccaccagagccaccggggatgtgctcgtcttcatggatgcccactgcgag
tgccacccaggctggctggagcccctcctcagcagaatagctggtgacaggagccgagtg
gtatctccggtgatagatgtgattgactggaagactttccagtattacccctcaaaggac
ctgcagcgtggggtgttggactggaagctggatttccactgggaacctttgccagagcat
gtgaggaaggccctccagtcccccataagccccatcaggagccctgtggtgcccggagag
gtggtggccatggacagacattacttccaaaacactggagcgtatgactctcttatgtcg
ctgcgaggtggtgaaaacctcgaactgtctttcaaggcctggctctgtggtggctctgtt
gaaatccttccctgctctcgggtaggacacatctaccaaaatcaggattcccattccccc
ctcgaccaggaggccaccctgaggaacagggttcgcattgctgagacctggctggggtca
ttcaaagaaaccttctacaagcatagcccagaggccttctccttgagcaagctccacaac
actggacttgggctctgtgcagactgccaggcagaaggggacatcctgggctgtcccatg
gtgttggctccttgcagtgacagccggcagcaacagtacctgcagcacaccagcaggaag
gagattcactttggcagcccacagcacctgtgctttgctgtcaggcaggagcaggtgatt
cttcagaactgcacggaggaaggcctggccatccaccagcagcactgggacttccaggag
aatgggatgattgtccacattctttctgggaaatgcatggaagctgtggtgcaagaaaac
aataaagatttgtacctgcgtccgtgtgatggaaaagcccgccagcagtggcgttttgac
cagatcaatgctgtggatgaacgatga

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_6|72_aa
MEVRPELGLISKEAQGCDTGHRNICNKSQPTKVPSAQKGSSPLEFAPSDKPGQLHPSIEI
VTCFLKVTSEQS

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_6|219_bp
atggaagttcggccagagctggggctgatatccaaggaggcccaaggatgcgacactgga
caccgaaacatctgcaataagagccaaccaacaaaggttccctcagcccagaagggcagc
agtcctctcgagtttgccccttcagacaaaccaggacagcttcatccaagtatagaaata
gtcacctgctttctcaaagtcacatcagaacagagctga

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_7|105_aa
MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKVGVNVKFPWLVAVLLAYHSVVSLL
QASSLIHFSGAQQFVMQTVSNQDSSSHFKSDMIRVTIAETLNFGP

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_7|318_bp
atggcagtgtttcatgacgaggtggaaatcgaggacttccaatatgacgaggactcggag
acgtatttctatccctgcccatgtggagataacttctccatcaccaaggtaggggttaac
gtcaaatttccatggctggtagctgtgcttttggcatatcacagtgttgtgtcactacta
caagcgagttccctgatacatttcagtggtgcccaacagtttgttatgcagactgtttca
aatcaggacagcagctctcacttcaagtctgatatgatccgcgtgaccatagctgaaacc
ttgaactttggaccttaa

>gi568815595f:16075152_16327497|GENSCAN_predicted_peptide_8|266_aa
GVEVQTDYVPLLNSLAAYGWQLTCVLPTPVVKTTSEGSVSTKQIVFLQRPCLPQKIKKKE
SKFQWRFSREEMHNRQMRKSKGKLSARDKQQAEENEKNLEDQSSKAGDMGNCVSGQQQEG
GVSEEMKGPVQEDKGEQLSPGGLLCGVGVEGEAVQNGPASHSRALVGICTGHSNPGEDAR
DGDAEEVRELERDGKWNSDATSLGTLGPTGGPSTATKRNCVSIPSLQARAVEALKDSQTT
TLLPPSADNSSLLFCQSQTDINTPHK

>gi568815595f:16075152_16327497|GENSCAN_predicted_CDS_8|801_bp
ggtgtcgaagtgcagacagactacgtgcccctgctgaactcgctggcggcctatggctgg
cagctcacctgtgtgctaccaactcccgtcgtcaagactaccagcgaggggagtgtatcc
accaagcagattgtctttcttcagagaccttgtctacctcagaaaatcaagaagaaggaa
tcgaagtttcagtggcgattctccagagaagaaatgcacaacaggcagatgaggaaatca
aaaggtaaactcagtgccagagacaaacaacaagcagaagaaaatgagaagaacttagaa
gaccagtcttccaaagctggagacatgggaaactgtgtttcaggacagcagcaggagggt
ggagtctccgaggagatgaagggccctgtccaagaggacaagggagaacagctgtcccct
ggtggcctgctgtgtggggtgggtgtggagggtgaggctgtgcagaatggtcctgccagc
cacagcagggccctggtggggatttgcactgggcactccaatcctggagaggatgccagg
gacggggatgctgaggaagtcagagagcttgaaagagatggcaagtggaactcagatgcc
accagcctgggcactttggggccaactggtgggccttctacagccacaaaacgcaactgt
gtttccataccctctttgcaggcaagagctgttgaggccctcaaggactcacagactact
actctcctcccaccttctgctgacaactcatcattacttttctgccaatcacaaactgac
atcaacactccccataagtaa